TCONS_00027575 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027575
Unique NameTCONS_00027575
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2652

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027575 ID=TCONS_00027575|Name=TCONS_00027575|organism=Clytia hemisphaerica|type=transcript|length=2652bp
CAATTATCTCCTCTTCGTTTATTTTAGATACAAGATAAACtataactaaa
ataaaaaacttgaaaagacTTGTGATTGCGGTGTGCGTTGAATAAGGCTT
GGTTTACACTTTACGAAGACAAAGTTTATTCAGTTGCTAAAGATGAgact
gaagaagaaaaacaagtaAAATAATATCAGTCTGCTTGAAAACTggcaaa
ttttaaataaatcccAACATAAAATTGACTGGCGTTCTAAAGTCAATTAC
ACTAGGAAACGTACATTTGGCGACCTTTTCCTGACCTGTGTACCTTTTGA
ACAAGACAGAAACTATCGAATACTAGCCAAAGTTTACATTACCCGACCAA
AGAAACCACAAAACTACCACGCTTATACTAACCGTTGAATCTCATACCGT
TTATTGTTTCGAAATCTTATGATAACAACGTAATTTTTTGGCGTTTGAAG
TAAAAACCCATCGACCAGACGAAACGTAAGCAAAGATTAAGCAAAGATTA
GCCTTTTAAAAGGCTAAAAAGCAATAAATCACCCTAATATTATGAATTGA
TTAATTATACATCAATCAAGCACGTACAATGTTTCGCGAGGAATTAATTC
ATTAAAAACCAACTCTGTAATTGAAACATTGTTTATTAattgtgtacacg
tttttttaataagaacatccaaaaattttgaagccttcggatgttcttaa
catgttcttattttcgcctttttttgagtatttttgtccattttcttaaa
aaattgggtgtttttagagtccgcgaagccttaaaatgttgttaactttt
tcttagCACTTTGGCCATCGAacccttatattcttatatagtttgttctt
ataaaataatatgTATCCCTTCAACTTTGATTGCGATATGGGGGTCATTG
GAAACTTGACCTATGTAATGAAATCCATCAACTGACACTTTGCCCTCATC
CAATCCCACCTAAACTAACAAGATACCTTGCCTTATAAAATGCTCTGAGA
TGGCTGGATTTTTGTACAAACCAAATGGTGAGGACACCAACAATCATTCA
TAAAAGACGAAAGAGAATCTGAAGAAATACATTCAGAATAATGGAAAACT
TTATATTTCTACTGTTGGCTTTATCTTTGAATTTGgAATGGATAACTGGC
TGTGTTCCTGACATGTTCACTAGGAAATTCGACAACAAATTGGTAGATAT
CCCTGTAACATCGTTATCTTACGATGCATCCAAAACTGCATTGGTTGAAA
AGCTCATTCACGATGTCCTTCAAGACGATTTCACATCAGATGCCGTCTAT
CAATGTAAACATTCCCAAACCGGATGGGTTAATATTACAACAGATGTTTC
ACATTTCGTCCATTTGAAGGTCTCAGGTTTACAATCAAACCCACCTAAGA
TGATCTGCCAACCTTTCAATGAAACTTATGGCAAACCACAAACATATTAC
TACATTGGTTTTTACGACCGTACCTTTAATGTAGCTCAAGGTCGTTCTTT
AGAAGAGTCTCACTTCTTTTTACAAAGAAGCTTTCGTAACCGATGGGCTT
TGGCAGCTGTTGGTAAATTTTATCCTTGCTCCGACCAAGCTTTAAGCGTT
TATAATGCACGTCTAATGCCAAATACTGGTTCTCAATCCGACAATCTGAT
TGGAGTCTCTCATTTACAATTCCGACCTTCCTGGCCACATCTTTACATGG
CGAAACATGGTGAACCATTAAACTCATCAATCTTGGCAAACCACGAAAAA
TTATTCTCCTTCCCTGGCAATACCCTAACAGTAAACCACCATTCAATCCT
CTGGTATGATCACACGGGTAAAGATGCTGTCAGTACCCAATTCCTGGCTG
ATGCGTGGTTGGACCTGCAGAATGGAGACAGAGCAGATGTCCATCTATCC
CTTACCATTGAGAAGCAATATTGGAAAGTTGATATGAGCGTTGTCAACCA
TAATTGGAATAAAATCTTTGCTGCCTATTTTGGTCAAACTAATCCCTTCT
TGGGCATACCTAATGATGACTTGGGAGAAAAACTTGATAGAGGAGTCTTT
TATATGAGTaCAACATTCACAAGTGAGCATGGGAACGAAAAGAAAGGCCA
AATAGCTCATGATGGTCATCCACGATACGGAATTGCGGCTAGTGGGAGAT
TTCATTCCAATCAAAATATGCCGGTTCATCTATTTCGTGGTTTGAATTTC
GACTTCAAGGCGTCCGGAAAACTTCTTGAAACTGcaactttgaattttga
aatggaATCAAATTCTTGTCTTGATCATGTCGGAGATCCTTTGAACAGAT
TCACACGAGTTCACGGATTATGGGGTCCCATGAGAAAGGTTGCTTTACCG
AAGCCTGGTCAAAAGGAAGCCTACATTGTCGAGGAAAACATAGAATACAC
TGGGAATCTCAAATGTCCAAGAAATTATTTTCGTTTTGGTTATATCAAAT
TTGACGGATTAGATTCTACTATGACGAAAAGTACAATCACATTTTCGTTC
ATTGAAAATCGATTTGGACGTCATTTGCGCTTCGTTTGTACCGCTTATAT
GAGAATCAAAGATCTCATTACCATCTTAGAGACAGAAGGTTGAGTTTTTA
TATATATtgtaatattttaattttgaaagttgtatttcagaaatgaattt
tg
Run BLAST on NCBI

protein sequence of TCONS_00027575-protein

>TCONS_00027575-protein ID=TCONS_00027575-protein|Name=TCONS_00027575-protein|organism=Clytia hemisphaerica|type=polypeptide|length=500bp
MENFIFLLLALSLNLEWITGCVPDMFTRKFDNKLVDIPVTSLSYDASKTA
LVEKLIHDVLQDDFTSDAVYQCKHSQTGWVNITTDVSHFVHLKVSGLQSN
PPKMICQPFNETYGKPQTYYYIGFYDRTFNVAQGRSLEESHFFLQRSFRN
RWALAAVGKFYPCSDQALSVYNARLMPNTGSQSDNLIGVSHLQFRPSWPH
LYMAKHGEPLNSSILANHEKLFSFPGNTLTVNHHSILWYDHTGKDAVSTQ
FLADAWLDLQNGDRADVHLSLTIEKQYWKVDMSVVNHNWNKIFAAYFGQT
NPFLGIPNDDLGEKLDRGVFYMSTTFTSEHGNEKKGQIAHDGHPRYGIAA
SGRFHSNQNMPVHLFRGLNFDFKASGKLLETATLNFEMESNSCLDHVGDP
LNRFTRVHGLWGPMRKVALPKPGQKEAYIVEENIEYTGNLKCPRNYFRFG
YIKFDGLDSTMTKSTITFSFIENRFGRHLRFVCTAYMRIKDLITILETEG
Run BLAST on NCBI

transcript from alignment at sc0000635:148335..151930+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027575 ID=TCONS_00027575|Name=TCONS_00027575|organism=Clytia hemisphaerica|type=transcript|length=3596bp|location=Sequence derived from alignment at sc0000635:148335..151930+ (Clytia hemisphaerica)
CAATTATCTCCTCTTCGTTTATTTTAGATACAAGATAAACtataactaaa
ataaaaaacttgaaaagacTTGTGATTGCGGTGTGCGTTGAATAAGGCTT
GGTTTACACTTTACGAAGACAAAGTTTATTCAGTTGCTAAAGATGAgact
gaagaagaaaaacaagtaAAATAATATCAGTCTGCTTGAAAACTggcaaa
ttttaaataaatcccAACATAAAATTGACTGGCGTTCTAAAGTCAATTAC
ACTAGGAAACGTACATTTGGCGACCTTTTCCTGACCTGTGTACCTTTTGA
ACAAGACAGAAACTATCGAATACTAGCCAAAGTTTACATTACCCGACCAA
AGAAACCACAAAACTACCACGCTTATACTAACCGTTGAATCTCATACCGT
TTATTGTTTCGAAATCTTATGATAACAACGTAATTTTTTGGCGTTTGAAG
TAAAAACCCATCGACCAGACGAAACGTAAGCAAAGATTAAGCAAAGATTA
GCCTTTTAAAAGGCTAAAAAGCAATAAATCACCCTAATATTATGAATTGA
TTAATTATACATCAATCAAGCACGTACAATGTTTCGCGAGGAATTAATTC
ATTAAAAACCAACTCTGTAATTGAAACATTGTTTATTAattgtgtacacg
tttttttaataagaacatccaaaaattttgaagccttcggatgttcttaa
catgttcttattttcgcctttttttgagtatttttgtccattttcttaaa
aaattgggtgtttttagagtccgcgaagccttaaaatgttgttaactttt
tcttagCACTTTGGCCATCGAacccttatattcttatatagtttgttctt
ataaaataatatgTATCCCTTCAACTTTGATTGCGATATGGGGGTCATTG
GAAACTTGACCTATGTAATGAAATCCATCAACTGACACTTTGCCCTCATC
CAATCCCACCTAAACTAACAAGATACCTTGCCTTATAAAATGCTCTGAGA
TGGCTGGATTTTTGTACAAACCAAATGGTGAGGACACCAACAATCATTCA
TAAAAGACGAAAGAGAATCTGAAGAAATACATTCAGAATAATGGAAAACT
TTATATTTCTACTGTTGGCTTTATCTTTGAATTTGggtaagtaatttttg
ttttcatatgcAGTTAatcctcttttttttttaaacgactttcAATTTCT
GAGACTTTTCTCGTTTGTTTTTAGAATGGATAACTGGCTGTGTTCCTGAC
ATGTTCACTAGGAAATGTAAGACCttcttccttatttttacaccctgttg
ttcatgatattcatgacgtaatataTTTTTCTACGAAAATACCCTGGTTT
TGCAAGTTGTGGCAAATTGAAGCTAgagaaaaattggcaaaacattacgt
aataGGAACACATCATGAATTATCATTACTTAAATTTTATCCTTTTTGCA
TGCTTTCATTTTGGCGTATTAGTTGCGATTTAAAATTTTGCGTCAATTAT
AGGGCCACATACAGATAATTCATTCAAAAAGCTGAGTGCCTGACTTCTCT
GGAATTTAAAGAGGATCCTTCTACTAAAACGTTGTGTTAAATACGAATGT
ATCCCTTTTTTAGTCGACAACAAATTGGTAGATATCCCTGTAACATCGTT
ATCTTACGATGCATCCAAAACTGCATTGGTTGAAAAGCTCATTCACGATG
TCCTTCAAGACGATTTCACATCAGATGCCGTCTATCAATGTAAACATTCC
CAAACCGGATGGGTTAATATTACAACAGATGTTTCACATTTCGTCCATTT
GAAGGTCTCAGGTTTACAATCAAACCCACCTAAGATGATCTGCCAACCTT
TCAATGAAACTTATGGCAAACCACAAACATATTACTACATTGGTTTTTAC
GACCGTACCTTTAATGTAGCTCAAGGTCGTTCTTTAGAAGAGTCTCACTT
CTTTTTACAAAGAAGCTTTCGTAACCGATGGGCTTTGGCAGCTGTTGGTA
AATTTTATCCTTGCTCCGACCAAGCTTTAAGCGTTTATAATGCACGTCTA
ATGCCAAATACTGGTTCTCAATCCGACAATCTGATTGGAGTCTCTCATTT
ACAATTCCGACCTTCCTGGCCACATCTTTACATGGCGAAACATGGTGAAC
CATTAAACTCATCAATCTTGGCAAACCACGAAAAATTATTCTCCTTCCCT
GGCAATACCCTAACAGTAAACCACCATTCAATCCTCTGGTATGATCACAC
GGGTAAAGATGCTGTCAGTACCCAATTCCTGGCTGATGCGTGGTTGGACC
TGCAGAATGGAGACAGAGCAGATGTCCATCTATCCCTTACCATTGAGAAG
CAATATTGGAAAGTTGATATGAGCGTTGTCAACCATAATTGGAATAAAAT
CTTTGCTGCCTATTTTGGTCAAACTAATCCCTTCTTGGGCATACCTAATG
ATGACTTGGGAGAAAAACTTGATAGAGGAGTCTTTTATATGAGTGTAAGA
TAAATACtacgattttttattttacagtttAGATCAAATTCTAGCCTTTA
CCTCTTGTAAAATAACGTTTTTTCGACTTTAGATTCCTACaactgaagtt
tgatttattaaaagtaatgttcttaattttagaCAACATTCACAAGTGAG
CATGGGAACGAAAAGAAAGGCCAAATAGCTCATGATGGTCATCCACGATA
CGGAATTGCGGCTAGTGGGAGATTTCATTCCAATCAAAATATGCCGGTTC
ATCTATTTCGTGGTTTGAATTTCGACTTCAAGGCGTCCGGAAAACTTCTT
GAAACTGcaactttgaattttgaaatggaATCAAATTCTTGTCTTGATCA
TGTCGGAGTAAGTTTTACTTAACCTTCTCGGTCTTTGGTCCGGACAACTT
AATGTAAACTTTCTTATTCTCGGGCGCTTTATAAAGAGTATTGAGAGAGA
TCTGCTAGTGTTTTTCGAGAAtgtacagttgacactctccaaatcgattt
tcaaggggaattggattttcatcgaataagggagcgtaacGAATAGAGCG
TCATTTATGTGAAGTTCTCCATGACGATGGTTTTAAATATTATCGAACAA
TGGAGCGTGTCAAATTGTAGAACgccgaattagagagcgttaaGTGTAAG
TAAATTTATGCTCAGCAGtcaaaaattcagaaataagGTTTAATATAAAA
GATCTGACacaatatttttaatttctagGATCCTTTGAACAGATTCACAC
GAGTTCACGGATTATGGGGTCCCATGAGAAAGGTTGCTTTACCGAAGCCT
GGTCAAAAGGAAGCCTACATTGTCGAGGAAAACATAGAATACACTGGGAA
TCTCAAATGTCCAAGAAATTATTTTCGTTTTGGTTATATCAAATTTGACG
GATTAGATTCTACTATGACGAAAAGTACAATCACATTTTCGTTCATTGAA
AATCGATTTGGACGTCATTTGCGCTTCGTTTGTACCGCTTATATGAGAAT
CAAAGATCTCATTACCATCTTAGAGACAGAAGGTTGAGTTTTTATATATA
Ttgtaatattttaattttgaaagttgtatttcagaaatgaattttg

Coding sequence (CDS) from alignment at sc0000635:148335..151930+

>TCONS_00027575 ID=TCONS_00027575|Name=TCONS_00027575|organism=Clytia hemisphaerica|type=CDS|length=7515bp|location=Sequence derived from alignment at sc0000635:148335..151930+ (Clytia hemisphaerica)
ATGGAAAACTTTATATTTCTACTGTTGGCTTTATCTTTGAATTTGgAATG
GATAACTGGCTGTGTTCCTGACATGTTCACTAGGAAATTCGACAACAAAT
TGGTAGATATCCCTGTAACATCGTTATCTTACGATGCATCCAAAACTGCA
TTGGTTGAAAAGCTCATTCACGATGTCCTTCAAGACGATTTCACATCAGA
TGCCGTCTATCAATGTAAACATTCCCAAACCGGATGGGTTAATATTACAA
CAGATGTTTCACATTTCGTCCATTTGAAGGTCTCAGGTTTACAATCAAAC
CCACCTAAGATGATCTGCCAACCTTTCAATGAAACTTATGGCAAACCACA
AACATATTACTACATTGGTTTTTACGACCGTACCTTTAATGTAGCTCAAG
GTCGTTCTTTAGAAGAGTCTCACTTCTTTTTACAAAGAAGCTTTCGTAAC
CGATGGGCTTTGGCAGCTGTTGGTAAATTTTATCCTTGCTCCGACCAAGC
TTTAAGCGTTTATAATGCACGTCTAATGCCAAATACTGGTTCTCAATCCG
ACAATCTGATTGGAGTCTCTCATTTACAATTCCGACCTTCCTGGCCACAT
CTTTACATGGCGAAACATGGTGAACCATTAAACTCATCAATCTTGGCAAA
CCACGAAAAATTATTCTCCTTCCCTGGCAATACCCTAACAGTAAACCACC
ATTCAATCCTCTGGTATGATCACACGGGTAAAGATGCTGTCAGTACCCAA
TTCCTGGCTGATGCGTGGTTGGACCTGCAGAATGGAGACAGAGCAGATGT
CCATCTATCCCTTACCATTGAGAAGCAATATTGGAAAGTTGATATGAGCG
TTGTCAACCATAATTGGAATAAAATCTTTGCTGCCTATTTTGGTCAAACT
AATCCCTTCTTGGGCATACCTAATGATGACTTGGGAGAAAAACTTGATAG
AGGAGTCTTTTATATGAGTaCAACATTCACAAGTGAGCATGGGAACGAAA
AGAAAGGCCAAATAGCTCATGATGGTCATCCACGATACGGAATTGCGGCT
AGTGGGAGATTTCATTCCAATCAAAATATGCCGGTTCATCTATTTCGTGG
TTTGAATTTCGACTTCAAGGCGTCCGGAAAACTTCTTGAAACTGcaactt
tgaattttgaaatggaATCAAATTCTTGTCTTGATCATGTCGGAGATCCT
TTGAACAGATTCACACGAGTTCACGGATTATGGGGTCCCATGAGAAAGGT
TGCTTTACCGAAGCCTGGTCAAAAGGAAGCCTACATTGTCGAGGAAAACA
TAGAATACACTGGGAATCTCAAATGTCCAAGAAATTATTTTCGTTTTGGT
TATATCAAATTTGACGGATTAGATTCTACTATGACGAAAAGTACAATCAC
ATTTTCGTTCATTGAAAATCGATTTGGACGTCATTTGCGCTTCGTTTGTA
CCGCTTATATGAGAATCAAAGATCTCATTACCATCTTAGAGACAGAAGGT
TGAATGGAAAACTTTATATTTCTACTGTTGGCTTTATCTTTGAATTTGgA
ATGGATAACTGGCTGTGTTCCTGACATGTTCACTAGGAAATTCGACAACA
AATTGGTAGATATCCCTGTAACATCGTTATCTTACGATGCATCCAAAACT
GCATTGGTTGAAAAGCTCATTCACGATGTCCTTCAAGACGATTTCACATC
AGATGCCGTCTATCAATGTAAACATTCCCAAACCGGATGGGTTAATATTA
CAACAGATGTTTCACATTTCGTCCATTTGAAGGTCTCAGGTTTACAATCA
AACCCACCTAAGATGATCTGCCAACCTTTCAATGAAACTTATGGCAAACC
ACAAACATATTACTACATTGGTTTTTACGACCGTACCTTTAATGTAGCTC
AAGGTCGTTCTTTAGAAGAGTCTCACTTCTTTTTACAAAGAAGCTTTCGT
AACCGATGGGCTTTGGCAGCTGTTGGTAAATTTTATCCTTGCTCCGACCA
AGCTTTAAGCGTTTATAATGCACGTCTAATGCCAAATACTGGTTCTCAAT
CCGACAATCTGATTGGAGTCTCTCATTTACAATTCCGACCTTCCTGGCCA
CATCTTTACATGGCGAAACATGGTGAACCATTAAACTCATCAATCTTGGC
AAACCACGAAAAATTATTCTCCTTCCCTGGCAATACCCTAACAGTAAACC
ACCATTCAATCCTCTGGTATGATCACACGGGTAAAGATGCTGTCAGTACC
CAATTCCTGGCTGATGCGTGGTTGGACCTGCAGAATGGAGACAGAGCAGA
TGTCCATCTATCCCTTACCATTGAGAAGCAATATTGGAAAGTTGATATGA
GCGTTGTCAACCATAATTGGAATAAAATCTTTGCTGCCTATTTTGGTCAA
ACTAATCCCTTCTTGGGCATACCTAATGATGACTTGGGAGAAAAACTTGA
TAGAGGAGTCTTTTATATGAGTaCAACATTCACAAGTGAGCATGGGAACG
AAAAGAAAGGCCAAATAGCTCATGATGGTCATCCACGATACGGAATTGCG
GCTAGTGGGAGATTTCATTCCAATCAAAATATGCCGGTTCATCTATTTCG
TGGTTTGAATTTCGACTTCAAGGCGTCCGGAAAACTTCTTGAAACTGcaa
ctttgaattttgaaatggaATCAAATTCTTGTCTTGATCATGTCGGAGAT
CCTTTGAACAGATTCACACGAGTTCACGGATTATGGGGTCCCATGAGAAA
GGTTGCTTTACCGAAGCCTGGTCAAAAGGAAGCCTACATTGTCGAGGAAA
ACATAGAATACACTGGGAATCTCAAATGTCCAAGAAATTATTTTCGTTTT
GGTTATATCAAATTTGACGGATTAGATTCTACTATGACGAAAAGTACAAT
CACATTTTCGTTCATTGAAAATCGATTTGGACGTCATTTGCGCTTCGTTT
GTACCGCTTATATGAGAATCAAAGATCTCATTACCATCTTAGAGACAGAA
GGTTGAATGGAAAACTTTATATTTCTACTGTTGGCTTTATCTTTGAATTT
GgAATGGATAACTGGCTGTGTTCCTGACATGTTCACTAGGAAATTCGACA
ACAAATTGGTAGATATCCCTGTAACATCGTTATCTTACGATGCATCCAAA
ACTGCATTGGTTGAAAAGCTCATTCACGATGTCCTTCAAGACGATTTCAC
ATCAGATGCCGTCTATCAATGTAAACATTCCCAAACCGGATGGGTTAATA
TTACAACAGATGTTTCACATTTCGTCCATTTGAAGGTCTCAGGTTTACAA
TCAAACCCACCTAAGATGATCTGCCAACCTTTCAATGAAACTTATGGCAA
ACCACAAACATATTACTACATTGGTTTTTACGACCGTACCTTTAATGTAG
CTCAAGGTCGTTCTTTAGAAGAGTCTCACTTCTTTTTACAAAGAAGCTTT
CGTAACCGATGGGCTTTGGCAGCTGTTGGTAAATTTTATCCTTGCTCCGA
CCAAGCTTTAAGCGTTTATAATGCACGTCTAATGCCAAATACTGGTTCTC
AATCCGACAATCTGATTGGAGTCTCTCATTTACAATTCCGACCTTCCTGG
CCACATCTTTACATGGCGAAACATGGTGAACCATTAAACTCATCAATCTT
GGCAAACCACGAAAAATTATTCTCCTTCCCTGGCAATACCCTAACAGTAA
ACCACCATTCAATCCTCTGGTATGATCACACGGGTAAAGATGCTGTCAGT
ACCCAATTCCTGGCTGATGCGTGGTTGGACCTGCAGAATGGAGACAGAGC
AGATGTCCATCTATCCCTTACCATTGAGAAGCAATATTGGAAAGTTGATA
TGAGCGTTGTCAACCATAATTGGAATAAAATCTTTGCTGCCTATTTTGGT
CAAACTAATCCCTTCTTGGGCATACCTAATGATGACTTGGGAGAAAAACT
TGATAGAGGAGTCTTTTATATGAGTaCAACATTCACAAGTGAGCATGGGA
ACGAAAAGAAAGGCCAAATAGCTCATGATGGTCATCCACGATACGGAATT
GCGGCTAGTGGGAGATTTCATTCCAATCAAAATATGCCGGTTCATCTATT
TCGTGGTTTGAATTTCGACTTCAAGGCGTCCGGAAAACTTCTTGAAACTG
caactttgaattttgaaatggaATCAAATTCTTGTCTTGATCATGTCGGA
GATCCTTTGAACAGATTCACACGAGTTCACGGATTATGGGGTCCCATGAG
AAAGGTTGCTTTACCGAAGCCTGGTCAAAAGGAAGCCTACATTGTCGAGG
AAAACATAGAATACACTGGGAATCTCAAATGTCCAAGAAATTATTTTCGT
TTTGGTTATATCAAATTTGACGGATTAGATTCTACTATGACGAAAAGTAC
AATCACATTTTCGTTCATTGAAAATCGATTTGGACGTCATTTGCGCTTCG
TTTGTACCGCTTATATGAGAATCAAAGATCTCATTACCATCTTAGAGACA
GAAGGTTGAATGGAAAACTTTATATTTCTACTGTTGGCTTTATCTTTGAA
TTTGgAATGGATAACTGGCTGTGTTCCTGACATGTTCACTAGGAAATTCG
ACAACAAATTGGTAGATATCCCTGTAACATCGTTATCTTACGATGCATCC
AAAACTGCATTGGTTGAAAAGCTCATTCACGATGTCCTTCAAGACGATTT
CACATCAGATGCCGTCTATCAATGTAAACATTCCCAAACCGGATGGGTTA
ATATTACAACAGATGTTTCACATTTCGTCCATTTGAAGGTCTCAGGTTTA
CAATCAAACCCACCTAAGATGATCTGCCAACCTTTCAATGAAACTTATGG
CAAACCACAAACATATTACTACATTGGTTTTTACGACCGTACCTTTAATG
TAGCTCAAGGTCGTTCTTTAGAAGAGTCTCACTTCTTTTTACAAAGAAGC
TTTCGTAACCGATGGGCTTTGGCAGCTGTTGGTAAATTTTATCCTTGCTC
CGACCAAGCTTTAAGCGTTTATAATGCACGTCTAATGCCAAATACTGGTT
CTCAATCCGACAATCTGATTGGAGTCTCTCATTTACAATTCCGACCTTCC
TGGCCACATCTTTACATGGCGAAACATGGTGAACCATTAAACTCATCAAT
CTTGGCAAACCACGAAAAATTATTCTCCTTCCCTGGCAATACCCTAACAG
TAAACCACCATTCAATCCTCTGGTATGATCACACGGGTAAAGATGCTGTC
AGTACCCAATTCCTGGCTGATGCGTGGTTGGACCTGCAGAATGGAGACAG
AGCAGATGTCCATCTATCCCTTACCATTGAGAAGCAATATTGGAAAGTTG
ATATGAGCGTTGTCAACCATAATTGGAATAAAATCTTTGCTGCCTATTTT
GGTCAAACTAATCCCTTCTTGGGCATACCTAATGATGACTTGGGAGAAAA
ACTTGATAGAGGAGTCTTTTATATGAGTaCAACATTCACAAGTGAGCATG
GGAACGAAAAGAAAGGCCAAATAGCTCATGATGGTCATCCACGATACGGA
ATTGCGGCTAGTGGGAGATTTCATTCCAATCAAAATATGCCGGTTCATCT
ATTTCGTGGTTTGAATTTCGACTTCAAGGCGTCCGGAAAACTTCTTGAAA
CTGcaactttgaattttgaaatggaATCAAATTCTTGTCTTGATCATGTC
GGAGATCCTTTGAACAGATTCACACGAGTTCACGGATTATGGGGTCCCAT
GAGAAAGGTTGCTTTACCGAAGCCTGGTCAAAAGGAAGCCTACATTGTCG
AGGAAAACATAGAATACACTGGGAATCTCAAATGTCCAAGAAATTATTTT
CGTTTTGGTTATATCAAATTTGACGGATTAGATTCTACTATGACGAAAAG
TACAATCACATTTTCGTTCATTGAAAATCGATTTGGACGTCATTTGCGCT
TCGTTTGTACCGCTTATATGAGAATCAAAGATCTCATTACCATCTTAGAG
ACAGAAGGTTGAATGGAAAACTTTATATTTCTACTGTTGGCTTTATCTTT
GAATTTGgAATGGATAACTGGCTGTGTTCCTGACATGTTCACTAGGAAAT
TCGACAACAAATTGGTAGATATCCCTGTAACATCGTTATCTTACGATGCA
TCCAAAACTGCATTGGTTGAAAAGCTCATTCACGATGTCCTTCAAGACGA
TTTCACATCAGATGCCGTCTATCAATGTAAACATTCCCAAACCGGATGGG
TTAATATTACAACAGATGTTTCACATTTCGTCCATTTGAAGGTCTCAGGT
TTACAATCAAACCCACCTAAGATGATCTGCCAACCTTTCAATGAAACTTA
TGGCAAACCACAAACATATTACTACATTGGTTTTTACGACCGTACCTTTA
ATGTAGCTCAAGGTCGTTCTTTAGAAGAGTCTCACTTCTTTTTACAAAGA
AGCTTTCGTAACCGATGGGCTTTGGCAGCTGTTGGTAAATTTTATCCTTG
CTCCGACCAAGCTTTAAGCGTTTATAATGCACGTCTAATGCCAAATACTG
GTTCTCAATCCGACAATCTGATTGGAGTCTCTCATTTACAATTCCGACCT
TCCTGGCCACATCTTTACATGGCGAAACATGGTGAACCATTAAACTCATC
AATCTTGGCAAACCACGAAAAATTATTCTCCTTCCCTGGCAATACCCTAA
CAGTAAACCACCATTCAATCCTCTGGTATGATCACACGGGTAAAGATGCT
GTCAGTACCCAATTCCTGGCTGATGCGTGGTTGGACCTGCAGAATGGAGA
CAGAGCAGATGTCCATCTATCCCTTACCATTGAGAAGCAATATTGGAAAG
TTGATATGAGCGTTGTCAACCATAATTGGAATAAAATCTTTGCTGCCTAT
TTTGGTCAAACTAATCCCTTCTTGGGCATACCTAATGATGACTTGGGAGA
AAAACTTGATAGAGGAGTCTTTTATATGAGTaCAACATTCACAAGTGAGC
ATGGGAACGAAAAGAAAGGCCAAATAGCTCATGATGGTCATCCACGATAC
GGAATTGCGGCTAGTGGGAGATTTCATTCCAATCAAAATATGCCGGTTCA
TCTATTTCGTGGTTTGAATTTCGACTTCAAGGCGTCCGGAAAACTTCTTG
AAACTGcaactttgaattttgaaatggaATCAAATTCTTGTCTTGATCAT
GTCGGAGATCCTTTGAACAGATTCACACGAGTTCACGGATTATGGGGTCC
CATGAGAAAGGTTGCTTTACCGAAGCCTGGTCAAAAGGAAGCCTACATTG
TCGAGGAAAACATAGAATACACTGGGAATCTCAAATGTCCAAGAAATTAT
TTTCGTTTTGGTTATATCAAATTTGACGGATTAGATTCTACTATGACGAA
AAGTACAATCACATTTTCGTTCATTGAAAATCGATTTGGACGTCATTTGC
GCTTCGTTTGTACCGCTTATATGAGAATCAAAGATCTCATTACCATCTTA
GAGACAGAAGGTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015551XLOC_015551Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027575-exon-sc0000635-1491911889:148335..149470TCONS_00027575-exon-sc0000635-1491911889:148335..149470Clytia hemisphaericaexon
TCONS_00027575-exon-sc0000635-1510915933:148335..149470TCONS_00027575-exon-sc0000635-1510915933:148335..149470Clytia hemisphaericaexon
TCONS_00027575-exon-sc0000635-1575043694:148335..149470TCONS_00027575-exon-sc0000635-1575043694:148335..149470Clytia hemisphaericaexon
TCONS_00027575-exon-sc0000635-1491911889:149559..149600TCONS_00027575-exon-sc0000635-1491911889:149559..149600Clytia hemisphaericaexon
TCONS_00027575-exon-sc0000635-1510915933:149559..149600TCONS_00027575-exon-sc0000635-1510915933:149559..149600Clytia hemisphaericaexon
TCONS_00027575-exon-sc0000635-1575043694:149559..149600TCONS_00027575-exon-sc0000635-1575043694:149559..149600Clytia hemisphaericaexon
TCONS_00027575-exon-sc0000635-1491911889:149948..150828TCONS_00027575-exon-sc0000635-1491911889:149948..150828Clytia hemisphaericaexon
TCONS_00027575-exon-sc0000635-1510915933:149948..150828TCONS_00027575-exon-sc0000635-1510915933:149948..150828Clytia hemisphaericaexon
TCONS_00027575-exon-sc0000635-1575043694:149948..150828TCONS_00027575-exon-sc0000635-1575043694:149948..150828Clytia hemisphaericaexon
TCONS_00027575-exon-sc0000635-1491911889:150967..151191TCONS_00027575-exon-sc0000635-1491911889:150967..151191Clytia hemisphaericaexon
TCONS_00027575-exon-sc0000635-1510915933:150967..151191TCONS_00027575-exon-sc0000635-1510915933:150967..151191Clytia hemisphaericaexon
TCONS_00027575-exon-sc0000635-1575043694:150967..151191TCONS_00027575-exon-sc0000635-1575043694:150967..151191Clytia hemisphaericaexon
TCONS_00027575-exon-sc0000635-1491911889:151563..151930TCONS_00027575-exon-sc0000635-1491911889:151563..151930Clytia hemisphaericaexon
TCONS_00027575-exon-sc0000635-1510915933:151563..151930TCONS_00027575-exon-sc0000635-1510915933:151563..151930Clytia hemisphaericaexon
TCONS_00027575-exon-sc0000635-1575043694:151563..151930TCONS_00027575-exon-sc0000635-1575043694:151563..151930Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027575-proteinTCONS_00027575-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000635supercontigsc0000635:148335..151930 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.7871	1.65858	0.988527	1.0318	2.42842	1.60946	3.24868	3.79298	2.9762	2.60721	3.17799	4.478	2.27151	2.43734	2.34192	3.12385	2.37658	3.69858	2.11708	2.27774	3.79318	4.09531	1.6329	1.87712	3.6329	2.79699	0.995641	0.616984	0.645275	0.361621
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027575 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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