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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027646 ID=TCONS_00027646|Name=TCONS_00027646|organism=Clytia hemisphaerica|type=transcript|length=4555bp
GCTTGGAATTTATATCTAAATTTTGTGTAAAGAAAGCACTCAAAAGGGGG
GTTTAATGGAGAGAATTGAAAGCTGTTGATGTTATAGTGAAAAGATTTCA
ATAGTCACAAGTTGTCAGATTGCAAACTAAacctaaaaatatcaaaaagt
gcagaaataaaaaaattacctaTCAGCTCTTCTATCGTCAACGGCTCGGC
TGCCATCTTTTTAGTTAAGTAATCAAGCGCATGCGCAGATCGAATTATTC
TTAGAGAGAAGGCTAGCAGGAAAGTTGGTTTTGACGCCTACTATAATTTT
ACTGACCACGACAAAGATAACAAATCTGTAACCATTATGGGGTGGCAACC
AGTCAATTTACAGTAAAAATTTGTATTGAAACTGACATCGATTCTGGTCA
TTATTATACAAAGAAATTAAATCCTTGTgaaaactactaaaaactacAAA
GCTATCAATTTGTGGGATGATCATGGCGCTTATGTGCTGCAAAAGTCAAG
ACGAATATGAGCAGCAACAAAGGTCAAAGAAGATTGATAGCCAAATTGCC
AAGGAGAAGATCCTCTTTAGAAGAAGGGTGAAGATCTTACTCCTTGGTGC
TGGTGAAAGTGGTAAATCAACTTTCCTCAAACAGATGAGAATTATTCATG
GAAAGTCTTACGAGAAAGATGATTTATTGGGATTCCGCCCAATTATTTAT
TCAAATGTTATGAAAGGAATGAAAGTTTTAGTAGATGCCAGGAGAAAACT
GAAGATTCCATGGGGTGATCCAGAATGTCAAGTTTATGGTGAAACATTAT
TGACTTTTCAGCCTCCCCACGGTCAGGGAATAGACACTGATTTATTTTTA
AGCCATTGTGATGCCGTTCATAAGTTGTGGAATGATACCGGAATTTCAGA
GGCATACAAAAGGAGAAATGAATTTCAATTGGGAGATTCTACGTCATATT
TCTTGAACAACTTGGAAAAGATTGGAAAAAGGGAATTCGTACCTACTATG
CAAGACGTTTTACATTCACGTAAAGCAACAAAAGGTATCCAAGAATATGA
TTTTGAGATTAAAGGAATTCCTTTCGTGATGGTAGATGTTGGTGGACAGA
GATCCCAGAGAACCAAATGGTTTCAATGCTTTGATGAAGTTACCTCAATA
TTGTTTATGGTATCATCCAGCGCCTACGATCAAGTCATCATGGAGGACCG
ACGCACAAACTGTTTAATTGAATCGTGTATGATTTTTGAAACAATCGTAA
ACAACAAATGTTTTGCAAATGTATCCATAATCCTTTTCTTAAACAAAACG
GACCTTTTAGAGCAAAAGATTGAGAGTAGGCATAACAGTATCAAGGATTT
TTTCCTGCAATTCAGTGGAGACCCGTACAATTTACAGGATGTACAAAACT
TTATATTGCAGATGTTTGACAGTCGCCGTCGGGAACGCTCTAAAGCACTT
TTCCATCATTTCACGACAGCTATCGATACCCAGAATATCAAATTTGTGTT
CCATGCAGTCAAGGATACGATTTTGCAGGATAACTTGAAATCTTTGATGT
TGCAATGAGGGATTGGTATGGTTTCGGAAATATCTAGATGTCCAACGTTA
AAATTAAAGTGATTGTGATATTATTATGATACCTATCATCAATTTTTACC
ATCTTGATTAGAATACAAAATTACCAGGTTATTCAGGGCTATTTGAGAAT
TATATGATGTCGTTGTGTTGGAGTAACAAAAGGCAAGTTATGAATTTGCC
GATTTTACAATGGAACCCTTGAAATAATGTGAAATTGAAGAAGGTGCAAA
ACCTAAAGATTGGATTTTGTGCTCTAAACACGGTTCGATGTATGTTCTGG
CAAGTTGGACTGGCcgtaaaattataaataaacaaCTCATGGACATATTC
CTACGAAATCGTAAATCTATGTTACCCTTGGATCCAGTAAAGGTCATCTT
TGAAAAGAAACTGCTATAAAAATGGAGACTTTCATTGCAGCAACACAATT
TAACAAGAAAACCCTCACCACACCTGCAACGTTATAAATCTGTTTCAAAA
ATAGAAGCTATATttacattttaagaaaaatttggaTGCTTTGGTGGTTT
AATGATGTGAGAGAGTTGTAGTTTAACAAATTTTaggtttatttttactt
ttttaaatgtttttttttctcaagatgaCAACTTAGTCTGgattttgttt
ataagaaaaagaagagaagagaataaccaaaacatcttttttgaaatatt
tttaagaatctttaaaattaaagttataTATATATTATTATAAATAGACA
ATCAATGAGCTTTGCAATCGCTGATAATTTTTATACAGCGTTTATAATTG
TTAATTAATGCTTGAGTTTGACCTGAATAAGTGCTCTGAGTGCTGATGCA
TGTCTTTCAATAGAAGCACTTTAACAGAAGCGAAGAtcattaatgttttt
ttttttgcctcgtcatttttttcacgcaaaataattttcatgcACTTTTA
ctcacttttgttttaaaaattggaaataaaattgatattttttcagccaa
atcaaaaatataaatagtGTATTTTGTATAAATATATAATTAGTATTAat
cttgaaaagtttttttttttttcgtttgttttattttacgTTTGTTTATg
ttcttctatttttcattaGTTAATTTCTTAGTGGACCTTTCTTTAAGCTG
GAAGCAAAGCGTCGAACTtcactccataactcgaacagatttgtgttccc
cttgcgtgttcgagttatagagactcgaCTGTAgtacctttttcaaaaga
ataatGTTCTACTCGTTACCTTTCCAACATCATAGAGTCATGACCATTAT
AACGGCTAACGGCATTTGATTCTTCGGGGTCAAAATAACCAggtgagatg
gagtttttataagatactttaataattggtcatttgaagtaataaaaatg
acacgttctttagaattgtaacaaaattgctttattactggttaacaacc
aaccaaatcaaataagagcttgtaaaaactccagctcgtCCCAAAATAAC
TCGAACATCTTGGCCAATGATAGTTTGTTTGCTTCCAGCTTTTATACTTT
TATGCATGAAGTTGAATCACTTTTCTAAATtgatttgtttatatttttat
cgctttgaaatttctttcaatgtTTATGTGGAATAATTGGGAGTCAAGTT
TTAAAAAGCTGAGATTGTGCTTAAAAATGAATTGACagcaaattcttttt
tttgaccGAACCTATAAGAACCGCAATGAGAGAGACTTTTTCGGAGTTTA
TAACCaggtttttatttgaattttaaatctaTAGGCGTTCTAActcaatt
tttatgaaatagatATTATGGGTGGGTCTTTTCTCATCAGGACTTTATTG
GAATGAACGTGTTTAAAGTAGTAGAactgatttcaatttttttgtaataa
tGATTTTTATTAAGGAGTTGTCTAGATATTTCTTACATCATTCATCTAGG
TTTTTTTTCTGCTAGCTCTTTCTTGACTTTAGCGCACTCAAGATCAGCAA
GTTTCATCTTCCCTATATTTTTGTGGACGTTTTTAAGCCAAGTGTCTGTC
AGTCAGATATTTCTAATTTTCTTAAACAGCCTTCGTTTTAGATACAATTT
TGAGGAtatgtatgcttataagaaaaacatttttttaagtctCTGTACAT
CCCATGTTTAATTCCTTCCTTGTATAATTGCAACACTTCTACGTATATAT
CTAGGCtcataatttgttcttaaaaacaatagaccttatcggagtttttg
atttttctaaaaaagcaaggcattgtgggattgtttcgagtgtattacaa
tagaattccctcgaggaattcctaagagatttctattgtagtacactcga
aacaatccctcAATGCatccttttttagaaaaatcaaaaactccaataAG
GTCTATTGCTATATAATCCTCCTGACTGTATGTGACAGACACTtgcttga
agaaaaaatttctatCCTGCATTCAAAAGTATCCTTAACTAGGTAATGAC
ACTTTGAAGTGGGGAGATGAAACCTTTCCAACATTGCACGCTTACTGaaa
atattacattatattataataaaaagtcacttttttaaaaatggatATGT
AATTTTACTTACGAAaggtggaaatttttttcataaaatctaTTTTCGTA
TATATAATATTTCACTTGCCCTAAGAATACATTTATTTACCTCGGGACGG
GGACTGGGTTCCAGTTTGCAAAGGTCGTAGTACGTCAAATGTTTGACGTC
ATTGTGCATTGACACACAGTAATTGACGTCACTCAACCTTGGTTAATTCG
AACTTAGCTCCTTTAGTCACATGGTTAATGGTTGTATTTAGAGGACATTG
AAAGGAAAAGCTTTATTATTTTGATCATATTGTATTGTATAAAAATATCA
CGTGACCttctttctctctttaaagaaaatccatttttgaaattttaatc
attTCTTCGTATATTTCTGCTTatttcagttattttatcaGTAGTTTTAA
ATCTT Run BLAST on NCBI transcript from alignment at sc0000638:64534..78916+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027646 ID=TCONS_00027646|Name=TCONS_00027646|organism=Clytia hemisphaerica|type=transcript|length=14383bp|location=Sequence derived from alignment at sc0000638:64534..78916+ (Clytia hemisphaerica)
GCTTGGAATTTATATCTAAATTTTGTGTAAAGAAAGCACTCAAAAGGGGG
GTTTAATGGAGAGAATTGAAAGCTGTTGATGTTATAGTGAAAAGATTTCA
ATAGTCACAAGTTGTCAGATTGCAAACTAAacctaaaaatatcaaaaagt
gcagaaataaaaaaattacctaTCAGCTCTTCTATCGTCAACGGCTCGGC
TGCCATCTTTTTAGTTAAGTAATCAAGCGCATGCGCAGATCGAATTATTC
TTAGAGAGAAGGCTAGCAGGAAAGTTGGTTTTGACGCCTACTATAATTTT
ACTGACCACGACAAAGATAACAAATCTGTAACCATTATGGGGTGGCAACC
AGTCAATTTACAGTAAAAATTTGTATTGAAACTGACATCGATTCTGGTCA
TTATTATACAAAGAAATTAAATCCTTGTgaaaactactaaaaactacAAA
GCTATCAATTTGTGGGATGATCATGGCGCTTATGTGCTGCAAAAGTCAAG
ACGAATATGAGCAGCAACAAAGGTCAAAGAAGATTGATAGCCAAATTGCC
AAGGAGAAGATCCTCTTTAGAAGAAGGGTGAAGATCTTACTCCTTGGTGC
TGGTGAAAGTGGTAAATCAACTTTCCTCAAACAGATGAGAATTATTCATG
GAAAGTCTTACGAGAAAGATGATTTATTGGGATTCCGCCCAATTATTTAT
TCAAATGTTATGAAAGGAATGAAAGTTTTAGTAGATGCCAGGAGAAAACT
GAAGATTCCATGGGGTGATCCAGAATGTCAAGTTTATGGTGAAACATTAT
TGACTTTTCAGCCTCCCCACGGTCAGGGAATAGACACTGATTTATTTTTA
AGCCATTGTGATGCCGTTCATAAGTTGTGGAATGATACCGGAATTTCAGA
GGCATACAAAAGGAGAAATGAATTTCAATTGGTAATTGTTTTTATccatt
aaaattaaaaagctgaAGTTTTACAggagtttgttttgttttgatatttc
tttaaaaaaatagtgTATCCCCTGCCCAGTCAGCGACTTATCCTATTTTG
GGAATGTCCTTATGTGAAAAGGTAATCTAGTGTTTGCTGGGTGTTAACAA
TTTATGTAATGTAGGACTTATGATTGCTTGGCATAATTAAACAACAGTTT
CCCCACCAGACAGAAACAACACCAAACAGTCCAGCAAAATAGGTttttct
aaaggtacggaaaaGGACTTTTTCCCatgaaaagtggcaaaggaatgtGT
TAGGGAAAATgtgaatcttatacaaaacaacagCAAATGGTATCTAGTAA
CATAAAAGCCAGTAAAAGCCagagtactttaatgggataaactttcgcag
ggattaaatttcgcggatttcgcggatttgggtgtcatccgcgagattaa
gtcccaatggaaatttggaagtgcctcatccgcgaaatatttctaaacaa
aactcaaaatatgtcaaataaatactttttgaatggttacttttattaaa
gaggcgcaaataatgtgtatttcaacaaccaacatgtatgatttgacagt
gaaagtcaaaatatcatgaaaatattgattttgcggataggcccaaccgc
aaaatttaatccccgcgaaagtttatcccattaaagtatgatCCTGCAGT
GGGAATCAGTATATATAATGAAGTGCACTCACAAATAttaatttgtcaga
tctaacataATCAGTACagcaaaataaaattaacaaagaattttctgtca
agaacctTGTGAGCATTCCAACAACTTTCATTGAATGAAATGATCTGCCA
CAGCTAGGGCCTATCGTAAGTTtatctaatatcgacatccctcgtctaat
tctgacacccttctttagagagaGGAATACTATACTATGAAAGCTTGAat
tactgattgaaaaaggattattcctctctgaccactaagcaaagaaaaac
aatttcaacctttctataaatttcagctgataaaaagggtgtcggaatta
gaggaggggtgttgacattagaccaagttacggtactgTCAACTCTGccc
taacttgggacgattggtcgaaacatgggactgttgatatctggcctgta
ttttcacttactgttaaatctctttgacaaaaaatttgtcttttttgttt
tcattcaaaatgagtGGACGcctggagaattagagaacgacCGCTACTTT
ACCGCCTAtggcccgatgggattaacaaataacgagtgttttgccactaa
tttgtctTCTTCGTCCAATTTAATGGTCTTCtttgcgtgtgttccactac
ggatttttttcataattcgaTTCAAAAGCCTGCTCAgtgtgaaagagaaa
ttgtgtattttttaatacgctgttcattaactgaaatcaaatgactttgg
aggttcggtgaaatcaAATTGTCGTCCCAAGTTCCCAACCAATATGAGTG
GCCAGAGGCCAAATTAAGGTAATTAAGGTAAAGTaatatagatttaaaaa
atatgacTACAAGTTATTCAGAGGATTTTTAAATTCTTGCCAGCAATTAG
CATTTGTTTTGTGTAGCCAAAAATTGCTGACTGACAAGTGAAAATTTGCA
GATTGCCATTAAAAATTTGCACTTTAGTATAGGTCAAATCCTTTCAGAAA
AAGAATTACACATTTGTTTTGTAATTGATAAACTGCTTGACTGAACAACA
CTCCATAGTGTTGACCTTGATTTTACTTTTCATAATGACAGGCTAGATCA
CTTATTTTTGCCTAAAGATTCATATGTTATTTGACAACACTTATggtttc
aatcttttttaaaaaaaagtttaatctTGGCCTCTTACTCAACTTCTACT
TTTGGATGTATTTTGCACTTGTAACAGACAAACTATTGatcatgaaaaca
tgattttttgtatgaactggtctgcatgaaaggaagtttttcTGTCTGAG
TAGTCTGATTAGTAGATTATCGGATCgcactaccttaagtggataaattt
tggcggggattaacaaatttaacaaaaacataattatgttaaaaatcaca
actttttagtatatttttgagttaattttcacccatttcgatgttccaaa
atttccaattcgccaaaccaatccccatcaagttttatgaaattgatcta
tcgcgaaattaaatatcCGCCTAAAATCGTATTtaggccaatcgccaaat
taaaccCACGCcgaaatttatccacttaaggtatgcactatatattttct
aaaatttagcccaaaacccttgggcgatttttaaaggtttggggtagggt
catttaacaaggggatcagaccccttttcACACTTtgcttttctttaaaa
atttgtattttctaGGTTTTAGAGTTTGGTCCCTCATCCATTAAAATAtt
gtttatattttaattcttagGGAGATTCTACGTCATATTTCTTGAACAAC
TTGGAAAAGATTGGAAAAAGGGTAAGaattaaatttatttaaaacctaaa
ataattatttcttcTAACATATCAATGGCGAAAAAGCTTGGAGTTAAGTT
TGCTAATCAGCAAAATCAGCTGGATttacatagcgtcagcctgggtttag
gtcccaggcaaaaattaggtcccccctgagttttaagccccccaaagatt
tatgaattttttgttagcccccaggacttttgaccctaaacactttccaa
aaattgatctggtaaaaaagttttttccaatgTGAATTACGTTCAGTCct
aagtttaagataaaatattttgcacactttctcTAAAAATATTGCGCTGC
AGgcgaaaatttttcagattcatgagcttcaatttgagtaaatgaagcca
actattaagctaAATTATTTCAGCCCccacgttaagtgatgagattttag
ctccccccaagtacataggtccccccaaaaaagtggtgtacttccagccc
cctcctttttggacctaccccggtggaggtcctataaattaacctatgtt
cgtccgttcgttcgtttttgttcgttaccaacttttctcgagattggctc
attagttttttctgattttttgcacaaagatgtgtaactataaaccctcg
aatgtggcggagcccgattttcgaaacaaaacttttttgggcaaattttg
gccaaaaaacggctaaaaaatgggtttttttggactttgtgaaaaatcgg
ATCATtaatcttttctgattttttgcatgaaagtagggtaccatcatagg
taaaagatggctaaagcagattttcccaaaaaaaatttgttggctcaaaa
aacgcatgtttagctataagaatcactatttaaacaagcatacatcaatg
ttcttagtccaattactcaatttttttatgagatagatgttttttttgct
catgagagcttacttttgaagaatatgtgtgtttggacaggaaattttgg
ttgcttggcgtgtttttatagaaaaactggccaaatttgatattttttta
taagcacattattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNaattacttaggtattagcttttctcga
gattggctctttcattgtttatgattttttgcacaaagatgcataactat
aaaccctcgaatgtgacggagcatgatttttgaaaaaaatgtttttgggc
aaatttgggccaaaaacagctaaaaaacagattttcccaaaaaaaatttg
ttggctcaaaaaacgcatgtttagctataagaatcactattaacaagcat
acatcaatgttcttagtccaatttctcaatttttttatgagatagatgtt
tttttttgctcatgagagcttacttttgaagaatatgtgtgtttagacag
gaaattttggttgcttggcgtgtttttatagaaaaactggcaaAATTcga
tatctatatattaatagcggtgctttgtgtgtctgtgtgtcaccactttc
attttcgctttgtttgtgttttgaaattatgacttttagtctattgctac
acaaatttgttctattggattcgcgccatttgcaaaagatcggatagagc
ttggtttagactttattaagcctttgttttgaaatttaaggcccatctac
atttagtaaatTTAACTTCTGCCCAGacttgcctttttctctcttctttt
gttttaaatgttctcgaatgtatttaacgatcgtatttattagtGACATT
Cggattcttttcaaaacaaaacaatttcatttcatagaaaagaatatttc
aaaagtaaataaagCATAAAAAGGTTTttggacaacaacagcattcaaag
ggcgaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAGTGTGTa
cctacgtcattttttatgtttaaattcgaaaagttatgacaagggtttaa
aaaagcaacttagaattttatatttttttcgatctgataaaaacaaaaag
ttgcactattctttgtgaccttcccactttttcctgaaaaattgtcatta
aaactggacggcatatttaacgcgagcCATACTGTaaagcgagaaaaata
actacctgcagagtcgtttcaaacgacactggtacagtaaacgatgctct
gataacttttgactttaaacaaaaaattatgtcacggGGGGGGGGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGGGGGGGGGCAGTAAACGATccatggttaaaagataagacaccag
gggaaggttagagttaaacgttGTAGATATTTCTTTTATGTGATCGCTTT
Ttaaagccagcttcaacatccaaaggacttttagtgcgttcagctacagc
ttaaccggcgtgcgacgccgggtaccggctagtatttttataagcacatt
atcaattacttaggtattagcttttctcgatattggctctttcattgttt
atgattttttgcacaaagatgcataactataaacccttgaatgtgacgga
gctcaatttttgaagaaaaaaaaacggccaaaaaaagagttttttggact
ttgtgaaatattggatcattgtatttttctgattttttgcatgaaagtag
gtaaaagatggctcaagcagatttttgtaaaaaataatttttcagctcaa
aaaacgcatgtttatctataagaatNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaatgtttttttcataaga
aacaaacgactaattttaatagatcgtcaatatttgtgttctgaatgatt
gtttaatggtcacgtcacgtatatatcaattataaatatgttaaatgcac
aaataggtaggtccataaaagtatcacttgttttggaaaaatttagggtg
taacccccccccccaaccagcATGGGGCTGACGCTATGATTTAGGTTCAA
TTATTCAGAGTATCAGCTCAGGTGTacccaaaaatgtattttgtttctgg
aaaaaaaattctttgagtCCTTCTTCAatatataattttataaaaatctt
caaattttaggGTAATTCTCCACAAACTGTTTTTAATGGCAACCTTTTAC
CATAGTGGGCagcacccctccaacccccacctgaataaagtcacccccac
ctgcatagggtaacccccacctgaaaaatgctaCCGACCCANNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCCCACCTAAGATTTGTGAGCAGG
CTAACCCCCACctgcttaaatttttctgaaaacctccaacccccccccta
aaGTTAGGGGGGGTTCCCACTATGTTAActttgctaaaaaattaaattgt
acGCATATTTTAGACAGCGTTTAGATTCTATTTACctctttaatggacct
acctcaGAAAAACTAATCAACTAATTTGTTACTTCGTTCTTCCGTTCATC
CGGCcattcgtctgttacaagctttcttcttttgcatagtgatgcaaaat
gacagtaCACAAAAAGTGATGGAGCCTGATTTCCTAGAAAGATTTCCtgg
gcaaatttgggtcaaaagtgcctaaaaattgGGTTTTTGGACTTGAGTGT
GAAATTACATAATAATCTTTATGTTCTTTTTTGCATAATAAAGAATTTGG
CTAAAGCTGTTTTCCCTGGAAAATTTTTATTCTCCTTAAAAtacagattt
tcattttttggggGAATTCCCTTTTATTGTTGATagggaaatttaaaata
tttatttacgTACCCCTGTATGACCGATCAGATACTATTTCCTGATTGTA
TCTCATGATTGGAAAGTGCTTAAGAACTTGAAAATTTGGACAGTTTCAGC
TAATGAATATTCAAGTTAAACTTCTTCTGTTTTGATTCAAAAGCCTGTTA
TAAAtatttgtattttacagaccatgaTTATTAAAGGTCAATGATTGATA
TAAAATCAACACTTATTTTCAACATATCTCATTATATAAAAGTGCTAtct
atgaacttgaaattttgactagTAATAGATAATGATGATGCTCAAATTAG
GATTTTATTCTTTTGGTCCGAGACACCCCTGATTTACTggtattttacaa
aaaagaatCTATTAGAGGGTTCCGTTTTATGTTAGTTAACAAAATCAACC
AATTTTGAATGATTTATCATAATTGGAAAATGCTTTAAATTCGTTTTCTT
TGTTagtctcttttcttttctatttcttgctattgttgccattttttcat
aaaatcaatCTTCAGGTAACATAGTTCGatccattttcatgaaaaagtgN
gtctcttttcttttctatttcttgctattgttgccattttttcctttttc
tcatAAAATCAATCTTCAGGTAACATAGTTCGATCCATTTTCATGAAAGG
GGGGGGGTAGCAAGGGAGGGGGTATAGTTTAAGAAGaggggcttacatat
atattgtagattattttcaagcactgttatgaaatttggtcttcatgaaa
ggaagtttcctagagtagtctgagtcgttcaaaaagaagaaggaagttta
ttatttcgctttttctctctaaagatatttcgtatatatttgttagctaa
ttttgtccaaaatccttggggaTAGGTAgttaggggggggggcaagaAGG
GGGAATCATTTAAGAAGGAAgatcagacccctttctgcACCATGGGTAAg
ttcattcagcatgtagcttatTTTTTTACCAATAATTTTTTACAGGAATT
CGTACCTACTATGCAAGACGTTTTACATTCACGTAAAGCAACAAAAGGTA
TCCAAGAATATGATTTCGAGATCNAGTTTGCCAATCAGCAAAATCAGCTG
GATTTAGGTTCAATTATTCAGAGTATCAGGTGTACCCAAAAATGTATttc
atttctgaaaaaaaattctttgtccTTCTTCAatatataattttataaaa
atcttcaaatttttgggTAATTCTCCACAAACTGTTTTTAATGGCAACCT
TTTAACTTtgctaaaaaaagaaattgttaaaaaagtaAATTCTACTCACA
TTTTAGACAGCGTTTAGATTCTATTACCTCTTTAATGGACCTGCTTCATA
AAAAGTAATCAACTAATTTGTTACTTCGTTCTTCCGTTCATCTGTTACAA
GCTTTCATCTTTTGTatagtgatgcaaaatgacagtaCACAtagtgacgg
agcctgatttccaagaaaaaatttcctGGGCAAATTTGGGTCAGAAGTGC
CTAAAAATTGGGTTTTTGGACTTGAGTGTGAAATTACATATTAATTTTTA
TGTTCTTTTTTGCATAACAAAGAATGTGACTAAAGCTGTTTTCCCTGGAT
AATTTTTACTCTCCTTAAAAtacagattttcattttttggggaaattccc
ttttattGTTGATAGGGAAATTTAATATATTTATTTACGTACCCCTGTAT
CAGATAATATTTCCTGATTGTATCTCATGATTGGAAAGTGCTAAAGAACT
TGAAAATTTGGACAGTGACAGCTAATGAATattcaaattaaactttttct
cttttgatTCAAAAGCCTGTTAtatttgtattttacagaccatgaTTATT
AAAGGGTCAATGATTGATATAAAATCAACACTTATTTTCAACATATCTCA
TTATATAAAAGTGCTATAtctatgaacttgaaattttgactagTAATAGA
TAATGATGATGCTCAAATTAGAATTTTATTCGTTTGGTCCGAGAGACCCC
TGATTTACTGGTATTTTACAAAACAGAATCTATTAGAGTGTTCCGTTTTA
TGCTAGCTAACAAAATCAACCAATTTTGAATGATTTATCATGATTGGAAA
ATGCTTTAAATTCGTTTTCTTTGTTagtctcttttcttttctatttcttg
ctattgttgccattttttcctttttctcatAAAATCAATCTTCAGGTAAC
ATAGTTCGATCCATTTTCATGAAAGGGGGGGGGTAGCAAGGGAGGGGGTA
TAGTTTAAGAAGaggggcttacatatatattgtagattattttcaagcac
tgttatgaaatttggtcttcatgaaaggaagtttcctgttagagtagtct
gagtcattcaaaaagaagaaggaagtttattatttcgctttttctctcta
aagatatttcgtatatatttgttagctaattttgtccaaaatccttgggg
aTAGGTAGTTGGGGGGGGCAAGAAGGGAGAATCATTTAAGAAGGAAgatc
agacccctttctgcACATTGGGTAGgttcattcagcatgtagcttatTTT
TACCAATAATTCTTTACAGGAATTTGTACCTACTATGCAAGACGTTTTAC
ATTCACGTAAAGCAACAAAAGGTATCCAAGAATATGATTTTGAGATTAAA
GGAATTCCTTTCGTGATGGTAGATGTTGGTGGACAGAGATCCCAGAGAAC
CAAATGGTTTCAATGCTTTGATGAAGTTACCTCAATATTGTTTATGGTAT
CATCCAGCGCCTACGATCAAGTCATCATGGAGGACCGACGCACAAACTGT
TTAATTGAATCGTGTATGATTTTTGAAACAATCGTAAACAACAAATGTTT
TGCAAATGTATCCATAATCCTTTTCTTAAACAAAACGGACCTTTTAGAGC
AAAAGATTGAGAGTAGGCATAACAGTATCAAGGATTTTTTCCTGCAATTC
AGTGGAGACCCGTACAATTTACAGGATGTACAAAACTTTATATTGCAGAT
GTTTGACAGTCGCCGTCGGGAACGCTCTAAAGCACTTTTCCATCATTTCA
CGACAGCTATCGATACCCAGAATATCAAATTTGTGTTCCATGCAGTCAAG
GATACGATTTTGCAGGATAACTTGAAATCTTTGATGTTGCAATGAGGGAT
TGGTATGGTTTCGGAAATATCTAGATGTCCAACGTTAAAATTAAAGTGAT
TGTGATATTATTATGATACCTATCATCAATTTTTACCATCTTGATTAGAA
TACAAAATTACCAGGTTATTCAGGGCTATTTGAGAATTATATGATGTCGT
TGTGTTGGAGTAACAAAAGGCAAGTTATGAATTTGCCGATTTTACAATGG
AACCCTTGAAATAATGTGAAATTGAAGAAGGTGCAAAACCTAAAGATTGG
ATTTTGTGCTCTAAACACGGTTCGATGTATGTTCTGGCAAGTTGGACTGG
CcgtaaaattataaataaacaaCTCATGGACATATTCCTACGAAATCGTA
AATCTATGTTACCCTTGGATCCAGTAAAGGTCATCTTTGAAAAGAAACTG
CTATAAAAATGGAGACTTTCATTGCAGCAACACAATTTAACAAGAAAACC
CTCACCACACCTGCAACGTTATAAATCTGTTTCAAAAATAGAAGCTATAT
ttacattttaagaaaaatttggaTGCTTTGGTGGTTTAATGATGTGAGAG
AGTTGTAGTTTAACAAATTTTaggtttatttttacttttttaaatgtttt
tttttctcaagatgaCAACTTAGTCTGgattttgtttataagaaaaagaa
gagaagagaataaccaaaacatcttttttgaaatatttttaagaatcttt
aaaattaaagttataTATATATTATTATAAATAGACAATCAATGAGCTTT
GCAATCGCTGATAATTTTTATACAGCGTTTATAATTGTTAATTAATGCTT
GAGTTTGACCTGAATAAGTGCTCTGAGTGCTGATGCATGTCTTTCAATAG
AAGCACTTTAACAGAAGCGAAGAtcattaatgtttttttttttgcctcgt
catttttttcacgcaaaataattttcatgcACTTTTActcacttttgttt
taaaaattggaaataaaattgatattttttcagccaaatcaaaaatataa
atagtGTATTTTGTATAAATATATAATTAGTATTAatcttgaaaagtttt
tttttttttcgtttgttttattttacgTTTGTTTATgttcttctattttt
cattaGTTAATTTCTTAGTGGACCTTTCTTTAAGCTGGAAGCAAAGCGTC
GAACATAGCAACGTTGGTCCTGACTTGCTGACGGTGTATGCTGTTAGGCT
GTTAACTCTCTTTAACTCAAATGTCTCTATAAGTCGAATGTctcaataac
tcgaacaagttttgtGGTCCCTTCAATTCACAATGCCTTGCAAACTtcac
tccataactcgaacagatttgtgttccccttgcgtgttcgagttatagag
actcgaCTGTAgtacctttttcaaaagaataatGTTCTACTCGTTACCTT
TCCAACATCATAGAGTCATGACCATTATAACGGCTAACGGCATTTGATTC
TTCGGGGTCAAAATAACCAggtgagatggagtttttataagatactttaa
taattggtcatttgaagtaataaaaatgacacgttctttagaattgtaac
aaaattgctttattactggttaacaaccaaccaaatcaaataagagcttg
taaaaactccagctcgtCCCAAAATAACTCGAACATCTTGGCCAATGATA
GTTTGTTTGCTTCCAGCTTTTATACTTTTATGCATGAAGTTGAATCACTT
TTCTAAATtgatttgtttatatttttatcgctttgaaatttctttcaatg
tTTATGTGGAATAATTGGGAGTCAAGTTTTAAAAAGCTGAGATTGTGCTT
AAAAATGAATTGACagcaaattcttttttttgaccGAACCTATAAGAACC
GCAATGAGAGAGACTTTTTCGGAGTTTATAACCaggtttttatttgaatt
ttaaatctaTAGGCGTTCTAActcaatttttatgaaatagatATTATGGG
TGGGTCTTTTCTCATCAGGACTTTATTGGAATGAACGTGTTTAAAGTAGT
AGAactgatttcaatttttttgtaataatGATTTTTATTAAGGAGTTGTC
TAGATATTTCTTACATCATTCATCTAGGTTTTTTTTCTGCTAGCTCTTTC
TTGACTTTAGCGCACTCAAGATCAGCAAGTTTCATCTTCCCTATATTTTT
GTGGACGTTTTTAAGCCAAGTGTCTGTCAGTCAGATATTTCTAATTTTCT
TAAACAGCCTTCGTTTTAGATACAATTTTGAGGAtatgtatgcttataag
aaaaacatttttttaagtctCTGTACATCCCATGTTTAATTCCTTCCTTG
TATAATTGCAACACTTCTACGTATATATCTAGGCtcataatttgttctta
aaaacaatagaccttatcggagtttttgatttttctaaaaaagcaaggca
ttgtgggattgtttcgagtgtattacaatagaattccctcgaggaattcc
taagagatttctattgtagtacactcgaaacaatccctcAATGCatcctt
ttttagaaaaatcaaaaactccaataAGGTCTATTGCTATATAATCCTCC
TGACTGTATGTGACAGACACTtgcttgaagaaaaaatttctatCCTGCAT
TCAAAAGTATCCTTAACTAGGTAATGACACTTTGAAGTGGGGAGATGAAA
CCTTTCCAACATTGCACGCTTACTGaaaatattacattatattataataa
aaagtcacttttttaaaaatggatATGTAATTTTACTTACGAAaggtgga
aatttttttcataaaatctaTTTTCGTATATATAATATTTCACTTGCCCT
AAGAATACATTTATTTACCTCGGGACGGGGACTGGGTTCCAGTTTGCAAA
GGTCGTAGTACGTCAAATGTTTGACGTCATTGTGCATTGACACACAGTAA
TTGACGTCACTCAACCTTGGTTAATTCGAACTTAGCTCCTTTAGTCACAT
GGTTAATGGTTGTATTTAGAGGACATTGAAAGGAAAAGCTTTATTATTTT
GATCATATTGTATTGTATAAAAATATCACGTGACCttctttctctcttta
aagaaaatccatttttgaaattttaatcattTCTTCGTATATTTCTGCTT
atttcagttattttatcaGTAGTTTTAAATCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027646-exon-sc0000638-1491911889:64534..65464 | TCONS_00027646-exon-sc0000638-1491911889:64534..65464 | Clytia hemisphaerica | exon |
| TCONS_00027646-exon-sc0000638-1510915933:64534..65464 | TCONS_00027646-exon-sc0000638-1510915933:64534..65464 | Clytia hemisphaerica | exon |
| TCONS_00027646-exon-sc0000638-1575043694:64534..65464 | TCONS_00027646-exon-sc0000638-1575043694:64534..65464 | Clytia hemisphaerica | exon |
| TCONS_00027646-exon-sc0000638-1491911889:67954..68004 | TCONS_00027646-exon-sc0000638-1491911889:67954..68004 | Clytia hemisphaerica | exon |
| TCONS_00027646-exon-sc0000638-1510915933:67954..68004 | TCONS_00027646-exon-sc0000638-1510915933:67954..68004 | Clytia hemisphaerica | exon |
| TCONS_00027646-exon-sc0000638-1575043694:67954..68004 | TCONS_00027646-exon-sc0000638-1575043694:67954..68004 | Clytia hemisphaerica | exon |
| TCONS_00027646-exon-sc0000638-1491911889:73629..73680 | TCONS_00027646-exon-sc0000638-1491911889:73629..73680 | Clytia hemisphaerica | exon |
| TCONS_00027646-exon-sc0000638-1510915933:73629..73680 | TCONS_00027646-exon-sc0000638-1510915933:73629..73680 | Clytia hemisphaerica | exon |
| TCONS_00027646-exon-sc0000638-1575043694:73629..73680 | TCONS_00027646-exon-sc0000638-1575043694:73629..73680 | Clytia hemisphaerica | exon |
| TCONS_00027646-exon-sc0000638-1491911889:75255..76937 | TCONS_00027646-exon-sc0000638-1491911889:75255..76937 | Clytia hemisphaerica | exon |
| TCONS_00027646-exon-sc0000638-1510915933:75255..76937 | TCONS_00027646-exon-sc0000638-1510915933:75255..76937 | Clytia hemisphaerica | exon |
| TCONS_00027646-exon-sc0000638-1575043694:75255..76937 | TCONS_00027646-exon-sc0000638-1575043694:75255..76937 | Clytia hemisphaerica | exon |
| TCONS_00027646-exon-sc0000638-1491911889:77079..78916 | TCONS_00027646-exon-sc0000638-1491911889:77079..78916 | Clytia hemisphaerica | exon |
| TCONS_00027646-exon-sc0000638-1510915933:77079..78916 | TCONS_00027646-exon-sc0000638-1510915933:77079..78916 | Clytia hemisphaerica | exon |
| TCONS_00027646-exon-sc0000638-1575043694:77079..78916 | TCONS_00027646-exon-sc0000638-1575043694:77079..78916 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000638 | supercontig | sc0000638:64534..78916 + |
Blast
BLAST of TCONS_00027646 vs. Swiss-Prot (Human)
Match: GNA13 (Guanine nucleotide-binding protein subunit alpha-13 OS=Homo sapiens GN=GNA13 PE=1 SV=2) HSP 1 Score: 447.588 bits (1150), Expect = 2.964e-143 Identity = 219/362 (60.50%), Postives = 283/362 (78.18%), Query Frame = 2
Query: 485 CCKSQDEYEQQQRSKKIDSQIAKEKILFRRRVKILLLGAGESGKSTFLKQMRIIHGKSYEKDDLLGFRPIIYSNVMKGMKVLVDARRKLKIPWGDPECQVYGETLLTFQ---PPHGQG-IDTDLFLSHCDAVHKLWNDTGISEAYKRRNEFQLGDSTSYFLNNLEKIGKREFVPTMQDVLHSRKATKGIQEYDFEIKGIPFVMVDVGGQRSQRTKWFQCFDEVTSILFMVSSSAYDQVIMEDRRTNCLIESCMIFETIVNNKCFANVSIILFLNKTDLLEQKIESRHNSIKDFFLQFSGDPYNLQDVQNFILQMFDSRRR-ERSKALFHHFTTAIDTQNIKFVFHAVKDTILQDNLKSLMLQ 1555
C + E EQQ++SK+ID +++EK +R VKILLLGAGESGKSTFLKQMRIIHG+ +++ FRP IYSNV+KGM+VLVDAR KL IPWGD Q +G+ +++F P QG ++T +FL + A+ LW D+GI AY RR EFQLG+S YFL+NL+K+G+ +++P+ QD+L +R+ TKGI EYDFEIK +PF MVDVGGQRS+R +WF+CFD VTSILF+VSSS +DQV+MEDR TN L ES IFETIVNN+ F+NVSIILFLNKTDLLE+K++ SIKD+FL+F GDP+ L+DVQ F+++ F ++RR ++ K L+HHFTTAI+T+NI+ VF VKDTIL DNLK LMLQ
Sbjct: 18 CLLTSGEAEQQRKSKEIDKCLSREKTYVKRLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVDAREKLHIPWGDNSNQQHGDKMMSFDTRAPMAAQGMVETRVFLQYLPAIRALWADSGIQNAYDRRREFQLGESVKYFLDNLDKLGEPDYIPSQQDILLARRPTKGIHEYDFEIKNVPFKMVDVGGQRSERKRWFECFDSVTSILFLVSSSEFDQVLMEDRLTNRLTESLNIFETIVNNRVFSNVSIILFLNKTDLLEEKVQI--VSIKDYFLEFEGDPHCLRDVQKFLVECFRNKRRDQQQKPLYHHFTTAINTENIRLVFRDVKDTILHDNLKQLMLQ 377
The following BLAST results are available for this feature:
|
