TCONS_00027647 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027647
Unique NameTCONS_00027647
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4492

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027647 ID=TCONS_00027647|Name=TCONS_00027647|organism=Clytia hemisphaerica|type=transcript|length=4492bp
AATTGAAAGCTGTTGATGTTATAGTGAAAAGATTTCAATAGTCACAAGTT
GTCAGATTGCAAACTAAacctaaaaatatcaaaaagtgcagaaataaaaa
aattacctaTCAGCTCTTCTATCGTCAACGGCTCGGCTGCCATCTTTTTA
GTTAAGTAATCAAGCGCATGCGCAGATCGAATTATTCTTAGAGAGAAGGC
TAGCAGGAAAGTTGGTTTTGACGCCTACTATAATTTTACTGACCACGACA
AAGATAACAAATCTGTAACCATTATGGGGTGGCAACCAGTCAATTTACAG
TAAAAATTTGTATTGAAACTGACATCGATTCTGGTCATTATTATACAAAG
AAATTAAATCCTTGTgaaaactactaaaaactacAAAGCTATCAATTTGT
GGGATGATCATGGCGCTTATGTGCTGCAAAAGTCAAGACGAATATGAGCA
GCAACAAAGGTCAAAGAAGATTGATAGCCAAATTGCCAAGGAGAAGATCC
TCTTTAGAAGAAGGGTGAAGATCTTACTCCTTGGTGCTGGTGAAAGTGGT
AAATCAACTTTCCTCAAACAGATGAGAATTATTCATGGAAAGTCTTACGA
GAAAGATGATTTATTGGGATTCCGCCCAATTATTTATTCAAATGTTATGA
AAGGAATGAAAGTTTTAGTAGATGCCAGGAGAAAACTGAAGATTCCATGG
GGTGATCCAGAATGTCAAGTTTATGGTGAAACATTATTGACTTTTCAGCC
TCCCCACGGTCAGGGAATAGACACTGATTTATTTTTAAGCCATTGTGATG
CCGTTCATAAGTTGTGGAATGATACCGGAATTTCAGAGGCATACAAAAGG
AGAAATGAATTTCAATTGGGAGATTCTACGTCATATTTCTTGAACAACTT
GGAAAAGATTGGAAAAAGGGAATTCGTACCTACTATGCAAGACGTTTTAC
ATTCACGTAAAGCAACAAAAGGTATCCAAGAATATGATTTTGAGATTAAA
GGAATTCCTTTCGTGATGGTAGATGTTGGTGGACAGAGATCCCAGAGAAC
CAAATGGTTTCAATGCTTTGATGAAGTTACCTCAATATTGTTTATGGTAT
CATCCAGCGCCTACGATCAAGTCATCATGGAGGACCGACGCACAAACTGT
TTAATTGAATCGTGTATGATTTTTGAAACAATCGTAAACAACAAATGTTT
TGCAAATGTATCCATAATCCTTTTCTTAAACAAAACGGACCTTTTAGAGC
AAAAGATTGAGAGTAGGCATAACAGTATCAAGGATTTTTTCCTGCAATTC
AGTGGAGACCCGTACAATTTACAGGATGTACAAAACTTTATATTGCAGAT
GTTTGACAGTCGCCGTCGGGAACGCTCTAAAGCACTTTTCCATCATTTCA
CGACAGCTATCGATACCCAGAATATCAAATTTGTGTTCCATGCAGTCAAG
GATACGATTTTGCAGGATAACTTGAAATCTTTGATGTTGCAATGAGGGAT
TGGTATGGTTTCGGAAATATCTAGATGTCCAACGTTAAAATTAAAGTGAT
TGTGATATTATTATGATACCTATCATCAATTTTTACCATCTTGATTAGAA
TACAAAATTACCAGGTTATTCAGGGCTATTTGAGAATTATATGATGTCGT
TGTGTTGGAGTAACAAAAGGCAAGTTATGAATTTGCCGATTTTACAATGG
AACCCTTGAAATAATGTGAAATTGAAGAAGGTGCAAAACCTAAAGATTGG
ATTTTGTGCTCTAAACACGGTTCGATGTATGTTCTGGCAAGTTGGACTGG
CcgtaaaattataaataaacaaCTCATGGACATATTCCTACGAAATCGTA
AATCTATGTTACCCTTGGATCCAGTAAAGGTCATCTTTGAAAAGAAACTG
CTATAAAAATGGAGACTTTCATTGCAGCAACACAATTTAACAAGAAAACC
CTCACCACACCTGCAACGTTATAAATCTGTTTCAAAAATAGAAGCTATAT
ttacattttaagaaaaatttggaTGCTTTGGTGGTTTAATGATGTGAGAG
AGTTGTAGTTTAACAAATTTTaggtttatttttacttttttaaatgtttt
tttttctcaagatgaCAACTTAGTCTGgattttgtttataagaaaaagaa
gagaagagaataaccaaaacatcttttttgaaatatttttaagaatcttt
aaaattaaagttataTATATATTATTATAAATAGACAATCAATGAGCTTT
GCAATCGCTGATAATTTTTATACAGCGTTTATAATTGTTAATTAATGCTT
GAGTTTGACCTGAATAAGTGCTCTGAGTGCTGATGCATGTCTTTCAATAG
AAGCACTTTAACAGAAGCGAAGAtcattaatgtttttttttttgcctcgt
catttttttcacgcaaaataattttcatgcACTTTTActcacttttgttt
taaaaattggaaataaaattgatattttttcagccaaatcaaaaatataa
atagtGTATTTTGTATAAATATATAATTAGTATTAatcttgaaaagtttt
tttttttttcgtttgttttattttacgTTTGTTTATgttcttctattttt
cattaGTTAATTTCTTAGTGGACCTTTCTTTAAGCTGGAAGCAAAGCGTC
GAACTtcactccataactcgaacagatttgtgttccccttgcgtgttcga
gttatagagactcgaCTGTAgtacctttttcaaaagaataatGTTCTACT
CGTTACCTTTCCAACATCATAGAGTCATGACCATTATAACGGCTAACGGC
ATTTGATTCTTCGGGGTCAAAATAACCAggtgagatggagtttttataag
atactttaataattggtcatttgaagtaataaaaatgacacgttctttag
aattgtaacaaaattgctttattactggttaacaaccaaccaaatcaaat
aagagcttgtaaaaactccagctcgtCCCAAAATAACTCGAACATCTTGG
CCAATGATAGTTTGTTTGCTTCCAGCTTTTATACTTTTATGCATGAAGTT
GAATCACTTTTCTAAATtgatttgtttatatttttatcgctttgaaattt
ctttcaatgtTTATGTGGAATAATTGGGAGTCAAGTTTTAAAAAGCTGAG
ATTGTGCTTAAAAATGAATTGACagcaaattcttttttttgaccGAACCT
ATAAGAACCGCAATGAGAGAGACTTTTTCGGAGTTTATAACCaggttttt
atttgaattttaaatctaTAGGCGTTCTAActcaatttttatgaaataga
tATTATGGGTGGGTCTTTTCTCATCAGGACTTTATTGGAATGAACGTGTT
TAAAGTAGTAGAactgatttcaatttttttgtaataatGATTTTTATTAA
GGAGTTGTCTAGATATTTCTTACATCATTCATCTAGGTTTTTTTTCTGCT
AGCTCTTTCTTGACTTTAGCGCACTCAAGATCAGCAAGTTTCATCTTCCC
TATATTTTTGTGGACGTTTTTAAGCCAAGTGTCTGTCAGTCAGATATTTC
TAATTTTCTTAAACAGCCTTCGTTTTAGATACAATTTTGAGGAtatgtat
gcttataagaaaaacatttttttaagtctCTGTACATCCCATGTTTAATT
CCTTCCTTGTATAATTGCAACACTTCTACGTATATATCTAGGCtcataat
ttgttcttaaaaacaatagaccttatcggagtttttgatttttctaaaaa
agcaaggcattgtgggattgtttcgagtgtattacaatagaattccctcg
aggaattcctaagagatttctattgtagtacactcgaaacaatccctcAA
TGCatccttttttagaaaaatcaaaaactccaataAGGTCTATTGCTATA
TAATCCTCCTGACTGTATGTGACAGACACTtgcttgaagaaaaaatttct
atCCTGCATTCAAAAGTATCCTTAACTAGGTAATGACACTTTGAAGTGGG
GAGATGAAACCTTTCCAACATTGCACGCTTACTGaaaatattacattata
ttataataaaaagtcacttttttaaaaatggatATGTAATTTTACTTACG
AAaggtggaaatttttttcataaaatctaTTTTCGTATATATAATATTTC
ACTTGCCCTAAGAATACATTTATTTACCTCGGGACGGGGACTGGGTTCCA
GTTTGCAAAGGTCGTAGTACGTCAAATGTTTGACGTCATTGTGCATTGAC
ACACAGTAATTGACGTCACTCAACCTTGGTTAATTCGAACTTAGCTCCTT
TAGTCACATGGTTAATGGTTGTATTTAGAGGACATTGAAAGGAAAAGCTT
TATTATTTTGATCATATTGTATTGTATAAAAATATCACGTGACCttcttt
ctctctttaaagaaaatccatttttgaaattttaatcattTCTTCGTATA
TTTCTGCTTatttcagttattttatcaGTAGTTTTAAATCTT
Run BLAST on NCBI

protein sequence of TCONS_00027647-protein

>TCONS_00027647-protein ID=TCONS_00027647-protein|Name=TCONS_00027647-protein|organism=Clytia hemisphaerica|type=polypeptide|length=363bp
MIMALMCCKSQDEYEQQQRSKKIDSQIAKEKILFRRRVKILLLGAGESGK
STFLKQMRIIHGKSYEKDDLLGFRPIIYSNVMKGMKVLVDARRKLKIPWG
DPECQVYGETLLTFQPPHGQGIDTDLFLSHCDAVHKLWNDTGISEAYKRR
NEFQLGDSTSYFLNNLEKIGKREFVPTMQDVLHSRKATKGIQEYDFEIKG
IPFVMVDVGGQRSQRTKWFQCFDEVTSILFMVSSSAYDQVIMEDRRTNCL
IESCMIFETIVNNKCFANVSIILFLNKTDLLEQKIESRHNSIKDFFLQFS
GDPYNLQDVQNFILQMFDSRRRERSKALFHHFTTAIDTQNIKFVFHAVKD
TILQDNLKSLMLQ
Run BLAST on NCBI

transcript from alignment at sc0000638:64597..78916+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027647 ID=TCONS_00027647|Name=TCONS_00027647|organism=Clytia hemisphaerica|type=transcript|length=14320bp|location=Sequence derived from alignment at sc0000638:64597..78916+ (Clytia hemisphaerica)
AATTGAAAGCTGTTGATGTTATAGTGAAAAGATTTCAATAGTCACAAGTT
GTCAGATTGCAAACTAAacctaaaaatatcaaaaagtgcagaaataaaaa
aattacctaTCAGCTCTTCTATCGTCAACGGCTCGGCTGCCATCTTTTTA
GTTAAGTAATCAAGCGCATGCGCAGATCGAATTATTCTTAGAGAGAAGGC
TAGCAGGAAAGTTGGTTTTGACGCCTACTATAATTTTACTGACCACGACA
AAGATAACAAATCTGTAACCATTATGGGGTGGCAACCAGTCAATTTACAG
TAAAAATTTGTATTGAAACTGACATCGATTCTGGTCATTATTATACAAAG
AAATTAAATCCTTGTgaaaactactaaaaactacAAAGCTATCAATTTGT
GGGATGATCATGGCGCTTATGTGCTGCAAAAGTCAAGACGAATATGAGCA
GCAACAAAGGTCAAAGAAGATTGATAGCCAAATTGCCAAGGAGAAGATCC
TCTTTAGAAGAAGGGTGAAGATCTTACTCCTTGGTGCTGGTGAAAGTGGT
AAATCAACTTTCCTCAAACAGATGAGAATTATTCATGGAAAGTCTTACGA
GAAAGATGATTTATTGGGATTCCGCCCAATTATTTATTCAAATGTTATGA
AAGGAATGAAAGTTTTAGTAGATGCCAGGAGAAAACTGAAGATTCCATGG
GGTGATCCAGAATGTCAAGTTTATGGTGAAACATTATTGACTTTTCAGCC
TCCCCACGGTCAGGGAATAGACACTGATTTATTTTTAAGCCATTGTGATG
CCGTTCATAAGTTGTGGAATGATACCGGAATTTCAGAGGCATACAAAAGG
AGAAATGAATTTCAATTGGTAATTGTTTTTATccattaaaattaaaaagc
tgaAGTTTTACAggagtttgttttgttttgatatttctttaaaaaaatag
tgTATCCCCTGCCCAGTCAGCGACTTATCCTATTTTGGGAATGTCCTTAT
GTGAAAAGGTAATCTAGTGTTTGCTGGGTGTTAACAATTTATGTAATGTA
GGACTTATGATTGCTTGGCATAATTAAACAACAGTTTCCCCACCAGACAG
AAACAACACCAAACAGTCCAGCAAAATAGGTttttctaaaggtacggaaa
aGGACTTTTTCCCatgaaaagtggcaaaggaatgtGTTAGGGAAAATgtg
aatcttatacaaaacaacagCAAATGGTATCTAGTAACATAAAAGCCAGT
AAAAGCCagagtactttaatgggataaactttcgcagggattaaatttcg
cggatttcgcggatttgggtgtcatccgcgagattaagtcccaatggaaa
tttggaagtgcctcatccgcgaaatatttctaaacaaaactcaaaatatg
tcaaataaatactttttgaatggttacttttattaaagaggcgcaaataa
tgtgtatttcaacaaccaacatgtatgatttgacagtgaaagtcaaaata
tcatgaaaatattgattttgcggataggcccaaccgcaaaatttaatccc
cgcgaaagtttatcccattaaagtatgatCCTGCAGTGGGAATCAGTATA
TATAATGAAGTGCACTCACAAATAttaatttgtcagatctaacataATCA
GTACagcaaaataaaattaacaaagaattttctgtcaagaacctTGTGAG
CATTCCAACAACTTTCATTGAATGAAATGATCTGCCACAGCTAGGGCCTA
TCGTAAGTTtatctaatatcgacatccctcgtctaattctgacacccttc
tttagagagaGGAATACTATACTATGAAAGCTTGAattactgattgaaaa
aggattattcctctctgaccactaagcaaagaaaaacaatttcaaccttt
ctataaatttcagctgataaaaagggtgtcggaattagaggaggggtgtt
gacattagaccaagttacggtactgTCAACTCTGccctaacttgggacga
ttggtcgaaacatgggactgttgatatctggcctgtattttcacttactg
ttaaatctctttgacaaaaaatttgtcttttttgttttcattcaaaatga
gtGGACGcctggagaattagagaacgacCGCTACTTTACCGCCTAtggcc
cgatgggattaacaaataacgagtgttttgccactaatttgtctTCTTCG
TCCAATTTAATGGTCTTCtttgcgtgtgttccactacggatttttttcat
aattcgaTTCAAAAGCCTGCTCAgtgtgaaagagaaattgtgtatttttt
aatacgctgttcattaactgaaatcaaatgactttggaggttcggtgaaa
tcaAATTGTCGTCCCAAGTTCCCAACCAATATGAGTGGCCAGAGGCCAAA
TTAAGGTAATTAAGGTAAAGTaatatagatttaaaaaatatgacTACAAG
TTATTCAGAGGATTTTTAAATTCTTGCCAGCAATTAGCATTTGTTTTGTG
TAGCCAAAAATTGCTGACTGACAAGTGAAAATTTGCAGATTGCCATTAAA
AATTTGCACTTTAGTATAGGTCAAATCCTTTCAGAAAAAGAATTACACAT
TTGTTTTGTAATTGATAAACTGCTTGACTGAACAACACTCCATAGTGTTG
ACCTTGATTTTACTTTTCATAATGACAGGCTAGATCACTTATTTTTGCCT
AAAGATTCATATGTTATTTGACAACACTTATggtttcaatcttttttaaa
aaaaagtttaatctTGGCCTCTTACTCAACTTCTACTTTTGGATGTATTT
TGCACTTGTAACAGACAAACTATTGatcatgaaaacatgattttttgtat
gaactggtctgcatgaaaggaagtttttcTGTCTGAGTAGTCTGATTAGT
AGATTATCGGATCgcactaccttaagtggataaattttggcggggattaa
caaatttaacaaaaacataattatgttaaaaatcacaactttttagtata
tttttgagttaattttcacccatttcgatgttccaaaatttccaattcgc
caaaccaatccccatcaagttttatgaaattgatctatcgcgaaattaaa
tatcCGCCTAAAATCGTATTtaggccaatcgccaaattaaaccCACGCcg
aaatttatccacttaaggtatgcactatatattttctaaaatttagccca
aaacccttgggcgatttttaaaggtttggggtagggtcatttaacaaggg
gatcagaccccttttcACACTTtgcttttctttaaaaatttgtattttct
aGGTTTTAGAGTTTGGTCCCTCATCCATTAAAATAttgtttatattttaa
ttcttagGGAGATTCTACGTCATATTTCTTGAACAACTTGGAAAAGATTG
GAAAAAGGGTAAGaattaaatttatttaaaacctaaaataattatttctt
cTAACATATCAATGGCGAAAAAGCTTGGAGTTAAGTTTGCTAATCAGCAA
AATCAGCTGGATttacatagcgtcagcctgggtttaggtcccaggcaaaa
attaggtcccccctgagttttaagccccccaaagatttatgaattttttg
ttagcccccaggacttttgaccctaaacactttccaaaaattgatctggt
aaaaaagttttttccaatgTGAATTACGTTCAGTCctaagtttaagataa
aatattttgcacactttctcTAAAAATATTGCGCTGCAGgcgaaaatttt
tcagattcatgagcttcaatttgagtaaatgaagccaactattaagctaA
ATTATTTCAGCCCccacgttaagtgatgagattttagctccccccaagta
cataggtccccccaaaaaagtggtgtacttccagccccctcctttttgga
cctaccccggtggaggtcctataaattaacctatgttcgtccgttcgttc
gtttttgttcgttaccaacttttctcgagattggctcattagttttttct
gattttttgcacaaagatgtgtaactataaaccctcgaatgtggcggagc
ccgattttcgaaacaaaacttttttgggcaaattttggccaaaaaacggc
taaaaaatgggtttttttggactttgtgaaaaatcggATCATtaatcttt
tctgattttttgcatgaaagtagggtaccatcataggtaaaagatggcta
aagcagattttcccaaaaaaaatttgttggctcaaaaaacgcatgtttag
ctataagaatcactatttaaacaagcatacatcaatgttcttagtccaat
tactcaatttttttatgagatagatgttttttttgctcatgagagcttac
ttttgaagaatatgtgtgtttggacaggaaattttggttgcttggcgtgt
ttttatagaaaaactggccaaatttgatatttttttataagcacattatt
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNaattacttaggtattagcttttctcgagattggctctttc
attgtttatgattttttgcacaaagatgcataactataaaccctcgaatg
tgacggagcatgatttttgaaaaaaatgtttttgggcaaatttgggccaa
aaacagctaaaaaacagattttcccaaaaaaaatttgttggctcaaaaaa
cgcatgtttagctataagaatcactattaacaagcatacatcaatgttct
tagtccaatttctcaatttttttatgagatagatgtttttttttgctcat
gagagcttacttttgaagaatatgtgtgtttagacaggaaattttggttg
cttggcgtgtttttatagaaaaactggcaaAATTcgatatctatatatta
atagcggtgctttgtgtgtctgtgtgtcaccactttcattttcgctttgt
ttgtgttttgaaattatgacttttagtctattgctacacaaatttgttct
attggattcgcgccatttgcaaaagatcggatagagcttggtttagactt
tattaagcctttgttttgaaatttaaggcccatctacatttagtaaatTT
AACTTCTGCCCAGacttgcctttttctctcttcttttgttttaaatgttc
tcgaatgtatttaacgatcgtatttattagtGACATTCggattcttttca
aaacaaaacaatttcatttcatagaaaagaatatttcaaaagtaaataaa
gCATAAAAAGGTTTttggacaacaacagcattcaaagggcgaNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNAAAAAGTGTGTacctacgtcatttt
ttatgtttaaattcgaaaagttatgacaagggtttaaaaaagcaacttag
aattttatatttttttcgatctgataaaaacaaaaagttgcactattctt
tgtgaccttcccactttttcctgaaaaattgtcattaaaactggacggca
tatttaacgcgagcCATACTGTaaagcgagaaaaataactacctgcagag
tcgtttcaaacgacactggtacagtaaacgatgctctgataacttttgac
tttaaacaaaaaattatgtcacggGGGGGGGGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGG
GCAGTAAACGATccatggttaaaagataagacaccaggggaaggttagag
ttaaacgttGTAGATATTTCTTTTATGTGATCGCTTTTtaaagccagctt
caacatccaaaggacttttagtgcgttcagctacagcttaaccggcgtgc
gacgccgggtaccggctagtatttttataagcacattatcaattacttag
gtattagcttttctcgatattggctctttcattgtttatgattttttgca
caaagatgcataactataaacccttgaatgtgacggagctcaatttttga
agaaaaaaaaacggccaaaaaaagagttttttggactttgtgaaatattg
gatcattgtatttttctgattttttgcatgaaagtaggtaaaagatggct
caagcagatttttgtaaaaaataatttttcagctcaaaaaacgcatgttt
atctataagaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNaatgtttttttcataagaaacaaacgactaa
ttttaatagatcgtcaatatttgtgttctgaatgattgtttaatggtcac
gtcacgtatatatcaattataaatatgttaaatgcacaaataggtaggtc
cataaaagtatcacttgttttggaaaaatttagggtgtaacccccccccc
caaccagcATGGGGCTGACGCTATGATTTAGGTTCAATTATTCAGAGTAT
CAGCTCAGGTGTacccaaaaatgtattttgtttctggaaaaaaaattctt
tgagtCCTTCTTCAatatataattttataaaaatcttcaaattttaggGT
AATTCTCCACAAACTGTTTTTAATGGCAACCTTTTACCATAGTGGGCagc
acccctccaacccccacctgaataaagtcacccccacctgcatagggtaa
cccccacctgaaaaatgctaCCGACCCANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCCCACCTAAGATTTGTGAGCAGGCTAACCCCCACct
gcttaaatttttctgaaaacctccaaccccccccctaaaGTTAGGGGGGG
TTCCCACTATGTTAActttgctaaaaaattaaattgtacGCATATTTTAG
ACAGCGTTTAGATTCTATTTACctctttaatggacctacctcaGAAAAAC
TAATCAACTAATTTGTTACTTCGTTCTTCCGTTCATCCGGCcattcgtct
gttacaagctttcttcttttgcatagtgatgcaaaatgacagtaCACAAA
AAGTGATGGAGCCTGATTTCCTAGAAAGATTTCCtgggcaaatttgggtc
aaaagtgcctaaaaattgGGTTTTTGGACTTGAGTGTGAAATTACATAAT
AATCTTTATGTTCTTTTTTGCATAATAAAGAATTTGGCTAAAGCTGTTTT
CCCTGGAAAATTTTTATTCTCCTTAAAAtacagattttcattttttgggg
GAATTCCCTTTTATTGTTGATagggaaatttaaaatatttatttacgTAC
CCCTGTATGACCGATCAGATACTATTTCCTGATTGTATCTCATGATTGGA
AAGTGCTTAAGAACTTGAAAATTTGGACAGTTTCAGCTAATGAATATTCA
AGTTAAACTTCTTCTGTTTTGATTCAAAAGCCTGTTATAAAtatttgtat
tttacagaccatgaTTATTAAAGGTCAATGATTGATATAAAATCAACACT
TATTTTCAACATATCTCATTATATAAAAGTGCTAtctatgaacttgaaat
tttgactagTAATAGATAATGATGATGCTCAAATTAGGATTTTATTCTTT
TGGTCCGAGACACCCCTGATTTACTggtattttacaaaaaagaatCTATT
AGAGGGTTCCGTTTTATGTTAGTTAACAAAATCAACCAATTTTGAATGAT
TTATCATAATTGGAAAATGCTTTAAATTCGTTTTCTTTGTTagtctcttt
tcttttctatttcttgctattgttgccattttttcataaaatcaatCTTC
AGGTAACATAGTTCGatccattttcatgaaaaagtgNgtctcttttcttt
tctatttcttgctattgttgccattttttcctttttctcatAAAATCAAT
CTTCAGGTAACATAGTTCGATCCATTTTCATGAAAGGGGGGGGGTAGCAA
GGGAGGGGGTATAGTTTAAGAAGaggggcttacatatatattgtagatta
ttttcaagcactgttatgaaatttggtcttcatgaaaggaagtttcctag
agtagtctgagtcgttcaaaaagaagaaggaagtttattatttcgctttt
tctctctaaagatatttcgtatatatttgttagctaattttgtccaaaat
ccttggggaTAGGTAgttaggggggggggcaagaAGGGGGAATCATTTAA
GAAGGAAgatcagacccctttctgcACCATGGGTAAgttcattcagcatg
tagcttatTTTTTTACCAATAATTTTTTACAGGAATTCGTACCTACTATG
CAAGACGTTTTACATTCACGTAAAGCAACAAAAGGTATCCAAGAATATGA
TTTCGAGATCNAGTTTGCCAATCAGCAAAATCAGCTGGATTTAGGTTCAA
TTATTCAGAGTATCAGGTGTACCCAAAAATGTATttcatttctgaaaaaa
aattctttgtccTTCTTCAatatataattttataaaaatcttcaaatttt
tgggTAATTCTCCACAAACTGTTTTTAATGGCAACCTTTTAACTTtgcta
aaaaaagaaattgttaaaaaagtaAATTCTACTCACATTTTAGACAGCGT
TTAGATTCTATTACCTCTTTAATGGACCTGCTTCATAAAAAGTAATCAAC
TAATTTGTTACTTCGTTCTTCCGTTCATCTGTTACAAGCTTTCATCTTTT
GTatagtgatgcaaaatgacagtaCACAtagtgacggagcctgatttcca
agaaaaaatttcctGGGCAAATTTGGGTCAGAAGTGCCTAAAAATTGGGT
TTTTGGACTTGAGTGTGAAATTACATATTAATTTTTATGTTCTTTTTTGC
ATAACAAAGAATGTGACTAAAGCTGTTTTCCCTGGATAATTTTTACTCTC
CTTAAAAtacagattttcattttttggggaaattcccttttattGTTGAT
AGGGAAATTTAATATATTTATTTACGTACCCCTGTATCAGATAATATTTC
CTGATTGTATCTCATGATTGGAAAGTGCTAAAGAACTTGAAAATTTGGAC
AGTGACAGCTAATGAATattcaaattaaactttttctcttttgatTCAAA
AGCCTGTTAtatttgtattttacagaccatgaTTATTAAAGGGTCAATGA
TTGATATAAAATCAACACTTATTTTCAACATATCTCATTATATAAAAGTG
CTATAtctatgaacttgaaattttgactagTAATAGATAATGATGATGCT
CAAATTAGAATTTTATTCGTTTGGTCCGAGAGACCCCTGATTTACTGGTA
TTTTACAAAACAGAATCTATTAGAGTGTTCCGTTTTATGCTAGCTAACAA
AATCAACCAATTTTGAATGATTTATCATGATTGGAAAATGCTTTAAATTC
GTTTTCTTTGTTagtctcttttcttttctatttcttgctattgttgccat
tttttcctttttctcatAAAATCAATCTTCAGGTAACATAGTTCGATCCA
TTTTCATGAAAGGGGGGGGGTAGCAAGGGAGGGGGTATAGTTTAAGAAGa
ggggcttacatatatattgtagattattttcaagcactgttatgaaattt
ggtcttcatgaaaggaagtttcctgttagagtagtctgagtcattcaaaa
agaagaaggaagtttattatttcgctttttctctctaaagatatttcgta
tatatttgttagctaattttgtccaaaatccttggggaTAGGTAGTTGGG
GGGGGCAAGAAGGGAGAATCATTTAAGAAGGAAgatcagacccctttctg
cACATTGGGTAGgttcattcagcatgtagcttatTTTTACCAATAATTCT
TTACAGGAATTTGTACCTACTATGCAAGACGTTTTACATTCACGTAAAGC
AACAAAAGGTATCCAAGAATATGATTTTGAGATTAAAGGAATTCCTTTCG
TGATGGTAGATGTTGGTGGACAGAGATCCCAGAGAACCAAATGGTTTCAA
TGCTTTGATGAAGTTACCTCAATATTGTTTATGGTATCATCCAGCGCCTA
CGATCAAGTCATCATGGAGGACCGACGCACAAACTGTTTAATTGAATCGT
GTATGATTTTTGAAACAATCGTAAACAACAAATGTTTTGCAAATGTATCC
ATAATCCTTTTCTTAAACAAAACGGACCTTTTAGAGCAAAAGATTGAGAG
TAGGCATAACAGTATCAAGGATTTTTTCCTGCAATTCAGTGGAGACCCGT
ACAATTTACAGGATGTACAAAACTTTATATTGCAGATGTTTGACAGTCGC
CGTCGGGAACGCTCTAAAGCACTTTTCCATCATTTCACGACAGCTATCGA
TACCCAGAATATCAAATTTGTGTTCCATGCAGTCAAGGATACGATTTTGC
AGGATAACTTGAAATCTTTGATGTTGCAATGAGGGATTGGTATGGTTTCG
GAAATATCTAGATGTCCAACGTTAAAATTAAAGTGATTGTGATATTATTA
TGATACCTATCATCAATTTTTACCATCTTGATTAGAATACAAAATTACCA
GGTTATTCAGGGCTATTTGAGAATTATATGATGTCGTTGTGTTGGAGTAA
CAAAAGGCAAGTTATGAATTTGCCGATTTTACAATGGAACCCTTGAAATA
ATGTGAAATTGAAGAAGGTGCAAAACCTAAAGATTGGATTTTGTGCTCTA
AACACGGTTCGATGTATGTTCTGGCAAGTTGGACTGGCcgtaaaattata
aataaacaaCTCATGGACATATTCCTACGAAATCGTAAATCTATGTTACC
CTTGGATCCAGTAAAGGTCATCTTTGAAAAGAAACTGCTATAAAAATGGA
GACTTTCATTGCAGCAACACAATTTAACAAGAAAACCCTCACCACACCTG
CAACGTTATAAATCTGTTTCAAAAATAGAAGCTATATttacattttaaga
aaaatttggaTGCTTTGGTGGTTTAATGATGTGAGAGAGTTGTAGTTTAA
CAAATTTTaggtttatttttacttttttaaatgtttttttttctcaagat
gaCAACTTAGTCTGgattttgtttataagaaaaagaagagaagagaataa
ccaaaacatcttttttgaaatatttttaagaatctttaaaattaaagtta
taTATATATTATTATAAATAGACAATCAATGAGCTTTGCAATCGCTGATA
ATTTTTATACAGCGTTTATAATTGTTAATTAATGCTTGAGTTTGACCTGA
ATAAGTGCTCTGAGTGCTGATGCATGTCTTTCAATAGAAGCACTTTAACA
GAAGCGAAGAtcattaatgtttttttttttgcctcgtcatttttttcacg
caaaataattttcatgcACTTTTActcacttttgttttaaaaattggaaa
taaaattgatattttttcagccaaatcaaaaatataaatagtGTATTTTG
TATAAATATATAATTAGTATTAatcttgaaaagtttttttttttttcgtt
tgttttattttacgTTTGTTTATgttcttctatttttcattaGTTAATTT
CTTAGTGGACCTTTCTTTAAGCTGGAAGCAAAGCGTCGAACATAGCAACG
TTGGTCCTGACTTGCTGACGGTGTATGCTGTTAGGCTGTTAACTCTCTTT
AACTCAAATGTCTCTATAAGTCGAATGTctcaataactcgaacaagtttt
gtGGTCCCTTCAATTCACAATGCCTTGCAAACTtcactccataactcgaa
cagatttgtgttccccttgcgtgttcgagttatagagactcgaCTGTAgt
acctttttcaaaagaataatGTTCTACTCGTTACCTTTCCAACATCATAG
AGTCATGACCATTATAACGGCTAACGGCATTTGATTCTTCGGGGTCAAAA
TAACCAggtgagatggagtttttataagatactttaataattggtcattt
gaagtaataaaaatgacacgttctttagaattgtaacaaaattgctttat
tactggttaacaaccaaccaaatcaaataagagcttgtaaaaactccagc
tcgtCCCAAAATAACTCGAACATCTTGGCCAATGATAGTTTGTTTGCTTC
CAGCTTTTATACTTTTATGCATGAAGTTGAATCACTTTTCTAAATtgatt
tgtttatatttttatcgctttgaaatttctttcaatgtTTATGTGGAATA
ATTGGGAGTCAAGTTTTAAAAAGCTGAGATTGTGCTTAAAAATGAATTGA
CagcaaattcttttttttgaccGAACCTATAAGAACCGCAATGAGAGAGA
CTTTTTCGGAGTTTATAACCaggtttttatttgaattttaaatctaTAGG
CGTTCTAActcaatttttatgaaatagatATTATGGGTGGGTCTTTTCTC
ATCAGGACTTTATTGGAATGAACGTGTTTAAAGTAGTAGAactgatttca
atttttttgtaataatGATTTTTATTAAGGAGTTGTCTAGATATTTCTTA
CATCATTCATCTAGGTTTTTTTTCTGCTAGCTCTTTCTTGACTTTAGCGC
ACTCAAGATCAGCAAGTTTCATCTTCCCTATATTTTTGTGGACGTTTTTA
AGCCAAGTGTCTGTCAGTCAGATATTTCTAATTTTCTTAAACAGCCTTCG
TTTTAGATACAATTTTGAGGAtatgtatgcttataagaaaaacatttttt
taagtctCTGTACATCCCATGTTTAATTCCTTCCTTGTATAATTGCAACA
CTTCTACGTATATATCTAGGCtcataatttgttcttaaaaacaatagacc
ttatcggagtttttgatttttctaaaaaagcaaggcattgtgggattgtt
tcgagtgtattacaatagaattccctcgaggaattcctaagagatttcta
ttgtagtacactcgaaacaatccctcAATGCatccttttttagaaaaatc
aaaaactccaataAGGTCTATTGCTATATAATCCTCCTGACTGTATGTGA
CAGACACTtgcttgaagaaaaaatttctatCCTGCATTCAAAAGTATCCT
TAACTAGGTAATGACACTTTGAAGTGGGGAGATGAAACCTTTCCAACATT
GCACGCTTACTGaaaatattacattatattataataaaaagtcacttttt
taaaaatggatATGTAATTTTACTTACGAAaggtggaaatttttttcata
aaatctaTTTTCGTATATATAATATTTCACTTGCCCTAAGAATACATTTA
TTTACCTCGGGACGGGGACTGGGTTCCAGTTTGCAAAGGTCGTAGTACGT
CAAATGTTTGACGTCATTGTGCATTGACACACAGTAATTGACGTCACTCA
ACCTTGGTTAATTCGAACTTAGCTCCTTTAGTCACATGGTTAATGGTTGT
ATTTAGAGGACATTGAAAGGAAAAGCTTTATTATTTTGATCATATTGTAT
TGTATAAAAATATCACGTGACCttctttctctctttaaagaaaatccatt
tttgaaattttaatcattTCTTCGTATATTTCTGCTTatttcagttattt
tatcaGTAGTTTTAAATCTT

Coding sequence (CDS) from alignment at sc0000638:64597..78916+

>TCONS_00027647 ID=TCONS_00027647|Name=TCONS_00027647|organism=Clytia hemisphaerica|type=CDS|length=4368bp|location=Sequence derived from alignment at sc0000638:64597..78916+ (Clytia hemisphaerica)
ATGATCATGGCGCTTATGTGCTGCAAAAGTCAAGACGAATATGAGCAGCA
ACAAAGGTCAAAGAAGATTGATAGCCAAATTGCCAAGGAGAAGATCCTCT
TTAGAAGAAGGGTGAAGATCTTACTCCTTGGTGCTGGTGAAAGTGGTAAA
TCAACTTTCCTCAAACAGATGAGAATTATTCATGGAAAGTCTTACGAGAA
AGATGATTTATTGGGATTCCGCCCAATTATTTATTCAAATGTTATGAAAG
GAATGAAAGTTTTAGTAGATGCCAGGAGAAAACTGAAGATTCCATGGGGT
GATCCAGAATGTCAAGTTTATGGTGAAACATTATTGACTTTTCAGCCTCC
CCACGGTCAGGGAATAGACACTGATTTATTTTTAAGCCATTGTGATGCCG
TTCATAAGTTGTGGAATGATACCGGAATTTCAGAGGCATACAAAAGGAGA
AATGAATTTCAATTGGGAGATTCTACGTCATATTTCTTGAACAACTTGGA
AAAGATTGGAAAAAGGGAATTCGTACCTACTATGCAAGACGTTTTACATT
CACGTAAAGCAACAAAAGGTATCCAAGAATATGATTTTGAGATTAAAGGA
ATTCCTTTCGTGATGGTAGATGTTGGTGGACAGAGATCCCAGAGAACCAA
ATGGTTTCAATGCTTTGATGAAGTTACCTCAATATTGTTTATGGTATCAT
CCAGCGCCTACGATCAAGTCATCATGGAGGACCGACGCACAAACTGTTTA
ATTGAATCGTGTATGATTTTTGAAACAATCGTAAACAACAAATGTTTTGC
AAATGTATCCATAATCCTTTTCTTAAACAAAACGGACCTTTTAGAGCAAA
AGATTGAGAGTAGGCATAACAGTATCAAGGATTTTTTCCTGCAATTCAGT
GGAGACCCGTACAATTTACAGGATGTACAAAACTTTATATTGCAGATGTT
TGACAGTCGCCGTCGGGAACGCTCTAAAGCACTTTTCCATCATTTCACGA
CAGCTATCGATACCCAGAATATCAAATTTGTGTTCCATGCAGTCAAGGAT
ACGATTTTGCAGGATAACTTGAAATCTTTGATGTTGCAATGAATGATCAT
GGCGCTTATGTGCTGCAAAAGTCAAGACGAATATGAGCAGCAACAAAGGT
CAAAGAAGATTGATAGCCAAATTGCCAAGGAGAAGATCCTCTTTAGAAGA
AGGGTGAAGATCTTACTCCTTGGTGCTGGTGAAAGTGGTAAATCAACTTT
CCTCAAACAGATGAGAATTATTCATGGAAAGTCTTACGAGAAAGATGATT
TATTGGGATTCCGCCCAATTATTTATTCAAATGTTATGAAAGGAATGAAA
GTTTTAGTAGATGCCAGGAGAAAACTGAAGATTCCATGGGGTGATCCAGA
ATGTCAAGTTTATGGTGAAACATTATTGACTTTTCAGCCTCCCCACGGTC
AGGGAATAGACACTGATTTATTTTTAAGCCATTGTGATGCCGTTCATAAG
TTGTGGAATGATACCGGAATTTCAGAGGCATACAAAAGGAGAAATGAATT
TCAATTGGGAGATTCTACGTCATATTTCTTGAACAACTTGGAAAAGATTG
GAAAAAGGGAATTCGTACCTACTATGCAAGACGTTTTACATTCACGTAAA
GCAACAAAAGGTATCCAAGAATATGATTTTGAGATTAAAGGAATTCCTTT
CGTGATGGTAGATGTTGGTGGACAGAGATCCCAGAGAACCAAATGGTTTC
AATGCTTTGATGAAGTTACCTCAATATTGTTTATGGTATCATCCAGCGCC
TACGATCAAGTCATCATGGAGGACCGACGCACAAACTGTTTAATTGAATC
GTGTATGATTTTTGAAACAATCGTAAACAACAAATGTTTTGCAAATGTAT
CCATAATCCTTTTCTTAAACAAAACGGACCTTTTAGAGCAAAAGATTGAG
AGTAGGCATAACAGTATCAAGGATTTTTTCCTGCAATTCAGTGGAGACCC
GTACAATTTACAGGATGTACAAAACTTTATATTGCAGATGTTTGACAGTC
GCCGTCGGGAACGCTCTAAAGCACTTTTCCATCATTTCACGACAGCTATC
GATACCCAGAATATCAAATTTGTGTTCCATGCAGTCAAGGATACGATTTT
GCAGGATAACTTGAAATCTTTGATGTTGCAATGAATGATCATGGCGCTTA
TGTGCTGCAAAAGTCAAGACGAATATGAGCAGCAACAAAGGTCAAAGAAG
ATTGATAGCCAAATTGCCAAGGAGAAGATCCTCTTTAGAAGAAGGGTGAA
GATCTTACTCCTTGGTGCTGGTGAAAGTGGTAAATCAACTTTCCTCAAAC
AGATGAGAATTATTCATGGAAAGTCTTACGAGAAAGATGATTTATTGGGA
TTCCGCCCAATTATTTATTCAAATGTTATGAAAGGAATGAAAGTTTTAGT
AGATGCCAGGAGAAAACTGAAGATTCCATGGGGTGATCCAGAATGTCAAG
TTTATGGTGAAACATTATTGACTTTTCAGCCTCCCCACGGTCAGGGAATA
GACACTGATTTATTTTTAAGCCATTGTGATGCCGTTCATAAGTTGTGGAA
TGATACCGGAATTTCAGAGGCATACAAAAGGAGAAATGAATTTCAATTGG
GAGATTCTACGTCATATTTCTTGAACAACTTGGAAAAGATTGGAAAAAGG
GAATTCGTACCTACTATGCAAGACGTTTTACATTCACGTAAAGCAACAAA
AGGTATCCAAGAATATGATTTTGAGATTAAAGGAATTCCTTTCGTGATGG
TAGATGTTGGTGGACAGAGATCCCAGAGAACCAAATGGTTTCAATGCTTT
GATGAAGTTACCTCAATATTGTTTATGGTATCATCCAGCGCCTACGATCA
AGTCATCATGGAGGACCGACGCACAAACTGTTTAATTGAATCGTGTATGA
TTTTTGAAACAATCGTAAACAACAAATGTTTTGCAAATGTATCCATAATC
CTTTTCTTAAACAAAACGGACCTTTTAGAGCAAAAGATTGAGAGTAGGCA
TAACAGTATCAAGGATTTTTTCCTGCAATTCAGTGGAGACCCGTACAATT
TACAGGATGTACAAAACTTTATATTGCAGATGTTTGACAGTCGCCGTCGG
GAACGCTCTAAAGCACTTTTCCATCATTTCACGACAGCTATCGATACCCA
GAATATCAAATTTGTGTTCCATGCAGTCAAGGATACGATTTTGCAGGATA
ACTTGAAATCTTTGATGTTGCAATGAATGATCATGGCGCTTATGTGCTGC
AAAAGTCAAGACGAATATGAGCAGCAACAAAGGTCAAAGAAGATTGATAG
CCAAATTGCCAAGGAGAAGATCCTCTTTAGAAGAAGGGTGAAGATCTTAC
TCCTTGGTGCTGGTGAAAGTGGTAAATCAACTTTCCTCAAACAGATGAGA
ATTATTCATGGAAAGTCTTACGAGAAAGATGATTTATTGGGATTCCGCCC
AATTATTTATTCAAATGTTATGAAAGGAATGAAAGTTTTAGTAGATGCCA
GGAGAAAACTGAAGATTCCATGGGGTGATCCAGAATGTCAAGTTTATGGT
GAAACATTATTGACTTTTCAGCCTCCCCACGGTCAGGGAATAGACACTGA
TTTATTTTTAAGCCATTGTGATGCCGTTCATAAGTTGTGGAATGATACCG
GAATTTCAGAGGCATACAAAAGGAGAAATGAATTTCAATTGGGAGATTCT
ACGTCATATTTCTTGAACAACTTGGAAAAGATTGGAAAAAGGGAATTCGT
ACCTACTATGCAAGACGTTTTACATTCACGTAAAGCAACAAAAGGTATCC
AAGAATATGATTTTGAGATTAAAGGAATTCCTTTCGTGATGGTAGATGTT
GGTGGACAGAGATCCCAGAGAACCAAATGGTTTCAATGCTTTGATGAAGT
TACCTCAATATTGTTTATGGTATCATCCAGCGCCTACGATCAAGTCATCA
TGGAGGACCGACGCACAAACTGTTTAATTGAATCGTGTATGATTTTTGAA
ACAATCGTAAACAACAAATGTTTTGCAAATGTATCCATAATCCTTTTCTT
AAACAAAACGGACCTTTTAGAGCAAAAGATTGAGAGTAGGCATAACAGTA
TCAAGGATTTTTTCCTGCAATTCAGTGGAGACCCGTACAATTTACAGGAT
GTACAAAACTTTATATTGCAGATGTTTGACAGTCGCCGTCGGGAACGCTC
TAAAGCACTTTTCCATCATTTCACGACAGCTATCGATACCCAGAATATCA
AATTTGTGTTCCATGCAGTCAAGGATACGATTTTGCAGGATAACTTGAAA
TCTTTGATGTTGCAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015596XLOC_015596Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027647-exon-sc0000638-1491911889:64597..65464TCONS_00027647-exon-sc0000638-1491911889:64597..65464Clytia hemisphaericaexon
TCONS_00027647-exon-sc0000638-1510915933:64597..65464TCONS_00027647-exon-sc0000638-1510915933:64597..65464Clytia hemisphaericaexon
TCONS_00027647-exon-sc0000638-1575043694:64597..65464TCONS_00027647-exon-sc0000638-1575043694:64597..65464Clytia hemisphaericaexon
TCONS_00027647-exon-sc0000638-1491911889:67954..68004TCONS_00027647-exon-sc0000638-1491911889:67954..68004Clytia hemisphaericaexon
TCONS_00027647-exon-sc0000638-1510915933:67954..68004TCONS_00027647-exon-sc0000638-1510915933:67954..68004Clytia hemisphaericaexon
TCONS_00027647-exon-sc0000638-1575043694:67954..68004TCONS_00027647-exon-sc0000638-1575043694:67954..68004Clytia hemisphaericaexon
TCONS_00027647-exon-sc0000638-1491911889:73629..73659TCONS_00027647-exon-sc0000638-1491911889:73629..73659Clytia hemisphaericaexon
TCONS_00027647-exon-sc0000638-1510915933:73629..73659TCONS_00027647-exon-sc0000638-1510915933:73629..73659Clytia hemisphaericaexon
TCONS_00027647-exon-sc0000638-1575043694:73629..73659TCONS_00027647-exon-sc0000638-1575043694:73629..73659Clytia hemisphaericaexon
TCONS_00027647-exon-sc0000638-1491911889:75234..76937TCONS_00027647-exon-sc0000638-1491911889:75234..76937Clytia hemisphaericaexon
TCONS_00027647-exon-sc0000638-1510915933:75234..76937TCONS_00027647-exon-sc0000638-1510915933:75234..76937Clytia hemisphaericaexon
TCONS_00027647-exon-sc0000638-1575043694:75234..76937TCONS_00027647-exon-sc0000638-1575043694:75234..76937Clytia hemisphaericaexon
TCONS_00027647-exon-sc0000638-1491911889:77079..78916TCONS_00027647-exon-sc0000638-1491911889:77079..78916Clytia hemisphaericaexon
TCONS_00027647-exon-sc0000638-1510915933:77079..78916TCONS_00027647-exon-sc0000638-1510915933:77079..78916Clytia hemisphaericaexon
TCONS_00027647-exon-sc0000638-1575043694:77079..78916TCONS_00027647-exon-sc0000638-1575043694:77079..78916Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027647-proteinTCONS_00027647-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000638supercontigsc0000638:64597..78916 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.36934	4.89566	1.88904	3.16202	49.613	33.5023	31.9716	33.57	19.5372	21.2456	18.3382	12.4147	15.0844	12.2215	14.1874	16.4735	20.8039	20.9729	16.0402	18.2376	29.4247	29.3867	14.6135	16.4305	9.36923	11.8062	35.3525	28.7483	31.5751	36.844
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000469Gprotein_alpha_12/13
IPR001019Gprotein_alpha_su
IPR011025GproteinA_insert
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0001664G-protein coupled receptor binding
GO:0004871signal transducer activity
GO:0003924GTPase activity
GO:0031683G-protein beta/gamma-subunit complex binding
GO:0005525GTP binding
GO:0019001guanyl nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
GO:0007186G-protein coupled receptor signaling pathway
GO:0007165signal transduction
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
biological_process GO:0007165 signal transduction
biological_process GO:0007264 small GTPase mediated signal transduction
molecular_function GO:0031683 G-protein beta/gamma-subunit complex binding
molecular_function GO:0001664 G-protein coupled receptor binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0019001 guanyl nucleotide binding
molecular_function GO:0004871 signal transducer activity
Blast
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BLAST of TCONS_00027647 vs. Swiss-Prot (Human)
Match: GNA13 (Guanine nucleotide-binding protein subunit alpha-13 OS=Homo sapiens GN=GNA13 PE=1 SV=2)

HSP 1 Score: 447.588 bits (1150), Expect = 2.236e-143
Identity = 219/362 (60.50%), Postives = 283/362 (78.18%), Query Frame = 2 
Query:  422 CCKSQDEYEQQQRSKKIDSQIAKEKILFRRRVKILLLGAGESGKSTFLKQMRIIHGKSYEKDDLLGFRPIIYSNVMKGMKVLVDARRKLKIPWGDPECQVYGETLLTFQ---PPHGQG-IDTDLFLSHCDAVHKLWNDTGISEAYKRRNEFQLGDSTSYFLNNLEKIGKREFVPTMQDVLHSRKATKGIQEYDFEIKGIPFVMVDVGGQRSQRTKWFQCFDEVTSILFMVSSSAYDQVIMEDRRTNCLIESCMIFETIVNNKCFANVSIILFLNKTDLLEQKIESRHNSIKDFFLQFSGDPYNLQDVQNFILQMFDSRRR-ERSKALFHHFTTAIDTQNIKFVFHAVKDTILQDNLKSLMLQ 1492
            C  +  E EQQ++SK+ID  +++EK   +R VKILLLGAGESGKSTFLKQMRIIHG+ +++     FRP IYSNV+KGM+VLVDAR KL IPWGD   Q +G+ +++F    P   QG ++T +FL +  A+  LW D+GI  AY RR EFQLG+S  YFL+NL+K+G+ +++P+ QD+L +R+ TKGI EYDFEIK +PF MVDVGGQRS+R +WF+CFD VTSILF+VSSS +DQV+MEDR TN L ES  IFETIVNN+ F+NVSIILFLNKTDLLE+K++    SIKD+FL+F GDP+ L+DVQ F+++ F ++RR ++ K L+HHFTTAI+T+NI+ VF  VKDTIL DNLK LMLQ
Sbjct:   18 CLLTSGEAEQQRKSKEIDKCLSREKTYVKRLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVDAREKLHIPWGDNSNQQHGDKMMSFDTRAPMAAQGMVETRVFLQYLPAIRALWADSGIQNAYDRRREFQLGESVKYFLDNLDKLGEPDYIPSQQDILLARRPTKGIHEYDFEIKNVPFKMVDVGGQRSERKRWFECFDSVTSILFLVSSSEFDQVLMEDRLTNRLTESLNIFETIVNNRVFSNVSIILFLNKTDLLEEKVQI--VSIKDYFLEFEGDPHCLRDVQKFLVECFRNKRRDQQQKPLYHHFTTAINTENIRLVFRDVKDTILHDNLKQLMLQ 377
The following BLAST results are available for this feature:
BLAST of TCONS_00027647 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GNA132.236e-14360.50Guanine nucleotide-binding protein subunit alpha-1... [more]
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