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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027738 ID=TCONS_00027738|Name=TCONS_00027738|organism=Clytia hemisphaerica|type=transcript|length=243bp
GTTAATAATTTGGAAGATCAGATGAAAGAGCGTTTAGAGGAAACAGATGG
CAATTTAGGGCAAATCAAAAACGAGATTATGGGGGAGATAGGCAGTCTCA
GGACTATATTGGAGAAGGCAGTCGACCAGTTTTCGATGTCAAGAAGCCGA
TCTGGTGGCAAAAAGTCCCTAGAATTGCTTGACAAGGTGAGGTCTCTTTA
CCGAGCTAACTTCAAAGATGGAGAAGGCTACGATTTATCGAAA Run BLAST on NCBI transcript from alignment at sc0000643:40321..41457- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027738 ID=TCONS_00027738|Name=TCONS_00027738|organism=Clytia hemisphaerica|type=transcript|length=1137bp|location=Sequence derived from alignment at sc0000643:40321..41457- (Clytia hemisphaerica)
GTTAATAATTTGGAAGATCAGATGAAAGAGCGTTTAGAGGAAACAGATGG
CAATTTAGGGCAAATCAAAAACGAGATTATGGGGGAGATAGGCAGTCTCA
GGACTATATTGGAGAAGGCAGTCGACCAGTTTTCGATGTCAAGAAGCCGA
TCTGGTGGCAAAAAGTCCCTAGAATTGCTTGTAAGAAAAACATTTATCAT
TTCTCTCATTCAGCTTATTCATAATATTTGCTCAGAGTAGGACCGCACTG
ATAATAGGAATATTATAAAATGAGTTAATCGGAGGAATAATAAAGCACAC
AATCTCGTCATTTTCTATTTTTCATTTATTAACAATGAATTCCCCAAGAA
GAAGCAGCACAGGAAACAAATCACAAAATTTTAATCTAAATTTTTCTATT
ATTTCAAATATTAACTTGACAGTGAGAAGAAAAAGATTTTTAAGCAGAAT
TTCGACAGCAATTTTTATGGTTCGTATACCATGATAAGAATGAAATTAGT
TCTCAGCCCCGAGAAATTTAGGGAAATTTTGAAATAAACGCTTTTTTTTC
CATAAGAATACACTTTATAAGAATGTGCATGATGAGAACAATCCTAAGAA
TTTCACCATTATGGAATTTTGCTACTCAAGCCAAGAATGCCATTTTAGAG
CATTTCCATTTATAAATTGTCAATTACCCCCAAGTAAGACTCCTTTCACA
AAAACTCCGTTTTATGCTAGAGACGTATGTACTAAATGTTAAATCTAGTA
TGAATTAGGATCTTAACCTAAGAAGTAAGAATATTTTAGGATGATTTTCC
TAAGAAAGTTAAGAATATCCATGATGAAATGAATTTACACAATTCTTATA
AAAAAGCGTGTAGGTTAAAAAGTACCCGGAAATGAATAAATTAGAACTTG
TCATAATAATTTATCCTACCAACTTAGAGGTGTGTTAAATTAGAGAATTG
ATAGAACGGCGTTCCAGGAACGCCTAAAGTATTCCAAAACTTATCCTACG
GCAATTACAACAACTTTGAAGAATCTTTGTCACTAAATATATTTCTCAAA
CTGATTTTTTCTTCTTTCCTTTAGGACAAGGTGAGGTCTCTTTACCGAGC
TAACTTCAAAGATGGAGAAGGCTACGATTTATCGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027738-exon-sc0000643-1575043694:41278..41457 | TCONS_00027738-exon-sc0000643-1575043694:41278..41457 | Clytia hemisphaerica | exon |
| TCONS_00027738-exon-sc0000643-1575043694:40321..40383 | TCONS_00027738-exon-sc0000643-1575043694:40321..40383 | Clytia hemisphaerica | exon |
| TCONS_00027738-exon-sc0000643-1510915933:41278..41457 | TCONS_00027738-exon-sc0000643-1510915933:41278..41457 | Clytia hemisphaerica | exon |
| TCONS_00027738-exon-sc0000643-1510915933:40321..40383 | TCONS_00027738-exon-sc0000643-1510915933:40321..40383 | Clytia hemisphaerica | exon |
| TCONS_00027738-exon-sc0000643-1491911889:41278..41457 | TCONS_00027738-exon-sc0000643-1491911889:41278..41457 | Clytia hemisphaerica | exon |
| TCONS_00027738-exon-sc0000643-1491911889:40321..40383 | TCONS_00027738-exon-sc0000643-1491911889:40321..40383 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000643 | supercontig | sc0000643:40321..41457 - |
Blast
The following BLAST results are available for this feature:
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