TCONS_00027751 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027751
Unique NameTCONS_00027751
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length6807

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027751 ID=TCONS_00027751|Name=TCONS_00027751|organism=Clytia hemisphaerica|type=transcript|length=6807bp
TCGATTTCCTTTGAGAAGTCTCGTTTTAACGAAAGGATTCACAAAAGTAA
AATGGCGTAGATTTTACATTTATTTGACCTTGCCGAAGTTTCTGTTCGCT
AAATTTGTACGTCCAAAGTATTTTGAATCGGTCCATCTTTGCTTTCAATA
CGGTTGACAAATTATTTCAAAGAACAATATACACAGGTACAAGCTGCATT
TCCACTGGTACATACACTGGTTATGATACCATCGTTGCAAAGTACATCAA
ATTCATTTAGCAGCTGAAGATACTTTGATTTATTTAAAAGATGCGAGTAC
CTGGCAATAGTATTAGCAGATAGTTCATTTAGTCGCTTTTCTTCTTGATG
GCGATTCTGCATTTGTGGATGGTTGTTGATGTAATCAAGCCGGTCTTGTG
GTATTTTATCAATTAGACACCATCGATCCTCACTTTCAGCTCTCGATAAA
GCAGTATAGGTTATTCCCAAACTTTGCTGTTCCATGTACTTAGCTTCTTG
TATACTCACCCTCATGAATTCGGCAGGTTGATTATTTCCAACAGTGATAC
CTTGAGCCTTAGCTATTGGGAGGGAATAACCAGGCATCAATGGTAAGCCA
GCNATGGTATTGTGGCAACAGGAACATTTAAGTTGGCTAAATTCTTTCGG
TTTTCTTTATTCACCTCACGCCAAGTTTCATGCAATGTTATTGTTGTTTC
AGCATTGCAGTAATTCTTCTTTTCAGCCTCGGGAAGCTCTTTTTCGTATC
TGGCATTTACAGCAAGCCAGTCTTGTTGGGTGATTCTGCCACCTCTAATT
CTTAATAACCTTtcaagaaacattttttcacACTCTTTCTGTCGCATTGT
CTGATTAAGAACAATGACGTCTTGAAAGTTTCGGTAAATGGCAAACCCGG
CAAGCTCATCAGGTGAAGCATTCTTTGCAGGGCGGAGATGAAGATCTAAT
TTTTTGACTGGCCCAAGCTGGCCAAGATCACCAAAAAAGTTCACAACTGG
AATTGATCCGAAGGTATTGTCACAATTATTTGTGGCTTGGGNGAGTGAAC
TGTCCGACCACCTGGGAGAAGCAAACTTGCTGTTCCAGTAGGAGCCAGAT
TCAACACTGCATTATTTCTTTGACGTAATCTCCTTGCTATAAAACTAAGT
GAATTTATGACAAAAGTTTTACCTGTACCTGCAGTCCCCTGTACCAATAA
TCGTAACGGTTCATAGTTCTCCCCTTTCTGGAGTAAAATCATACGTTCTA
GATTTATTGCTATTATTAGTCTTTGCAACTCGTTGGCTAAAAGTAGATTA
ATTCTTGGCAAGTCACATCTACCGTACGAATTGACTGTTTGTTTCTCAAC
TTCGGCATCCATATCATCCAACCAAGAGCCAACATTGTCTGGCCAAGCTT
GTCCTAAGCATTGCATTGCATACTCATGCCAATCAAAGTCTGGTCCTCCA
TCAAGTAATGGAACCTCAAGTTCCTCATCAACAGCATTCGAGGGATTAGC
ATCGTGAAGCTCATTCAACAATTCATGAGCTACATTAACTTCCCTCATTT
GATAATCTTGTGAAAAGTTACTGGAGGAAAAGGAGTATTGAGAATCAGCT
TGTGACTCTTGATTTGCATTATCATTGTGCTGTTCATTTAGCTTGTGCCT
TCTTTTACGTTCTCTCTCCATTTTTTCATCATATCTCTTTTTTGCTGATT
TCACATTATCTTTAACAACACGTGGGCATTGATCTGTATCAAGAAAGCGT
GCAAAAGCTTCACCAAAAGTTTCTTCTTCTATCTTCAAATCTTCAGGTTT
TGTCCATACTCCAGGTGAAAACATCATGAGCTTACCTTTACAGTAGTCTT
CTGAGAGTGGCCAGACAGGATTCACTTGGATACCTGTGAAAACTGGGCAG
TGATCAGCAGCGCATTTGGTTCTGCAAGAACATTCTCTCACCCAATCATA
TAAGGTCATTGTAGGATTCTTTTCTCTACGCTCATTACTTAGAAACTTAT
CGATAGCAATTTTTTGAGTGAAGTTTTCACCATCAGGCTTATTGCTAAGA
GGCCTATAATCACTCAAACCAACAGATTGAAACTTTCTAGTACAATGCCA
CAGTTTGCCACCAGAATTGATAAAGTCACAACAAGCAGCAGGTGTATCAA
TTTTACCAAGTATCCTATTGAGCAGTCTTAATACGATACTTTTAACTGAA
GCATTGGGATCTGCACTGTCTAAAAGGTGACCATAGATAGTGACCAAATC
CTGTGTTGCGGCAGCACCTTTGCATGCGTAAGATGtgatatatttttgta
aatttaacAAATCTTGATCAACCAGAGCCTGAGTATCGCAGTTGGCCAAC
CAGGATAATAAATGAGCTTTTACATTCATTATCATCCTGCAATGGTCTCT
GGGGCCCTCATACCTTGGATGCTTATCTCCAGTTAGAATTGGGGCGAAAG
GATGTAATTCTTTTCCTGGTGTTTTTTTAGTTATGGGATCTTCTTTTCCA
AAATGGACCCTACAGTATCGTGTATCAGAGTcaactctttttcttttcag
acaATAGTCATTACAATTATGTAATGCTACTCGATTCACAAGATAAAGAT
ACAattctctaactttttctgGGGTGGTGCAATATTCTGTCATTATAAGA
TTCAGTGGGTCAATTTTAGGAGGCTCTTGGGTACCCTCTGGTTTTGCCCA
TTTTTCCATATTTGGAATCCAGACTTTAGAGCCATCTTGGCCATTCTCTT
GGGAGCCACCTGCAGGGTGCATACTAACAAAGCCTGGTGAAAATATGGTA
TCTGTGTCTTCTTCATGTGTTTGAAGCCATTTATATAAGGTCTCAGCTTT
TTCTTGGTCACTAGATAAACCATCTATATCAAGAGCTTGCTCGATATTTT
TGGCTTGAGTTTCAGAAAATAGGAGTCCATGGCTGTGAATTTGTCCTCTT
GATTTGGCAAATTCAAAGCGAAACCAATAATCAGTTAAGTTAAACAACTC
TTTGGCTACTGTGTTATAGTAATTTATTGTCCTTGTCTCGAAATATAAAG
TGGCAATGTGCAGATTTTGTAAAACTGTTCTTCTGAGATAATGCATATCT
GTATtcaatttatttaaaatgttATCATAAGTGATCTCACATGTAGAACT
AATGTATTTAGCCAAAAATTGTTTAAGTGGAGCCCAGTGGAGTTCTGCCA
TACTATTAGTATGAAAGTAACTTGGTAAATCCCCTATTGAGTATCTTCTA
AAGAAAAGTAAAGCATCCAATTCTCTTTTGCATCTGTTCCAATATGGGTC
AGAATTGACAAGATTGGAGCCCATCCTGATAACTTTTCTGGCAATTGAAT
CGTCATTATTGTTAAAACGCTCTTTCAGTTCATCAATGCTAATGTGACTG
TCGGTTAGCTGTTGCGCTACTAAAAAGTTGCCAttgtttaaagctttttt
acgTAGTGATAGATTGTacagaaaaaattttaaaaatggatGTTTAGAGA
CACGGTTatccttttgaaaataaatatgctttaTCCATTCATCCAAACTG
ACTGTCACCAAAGGATTATGGGTAAAGTCACAGGTAGCTGCTGTGAAGAT
GGATGGAAAGGCTTGTGCAAAAAAGCCAGGAGTTTTTAATTCGGATAAAG
GTTCAGCATCTGCATATTTCCATTCTGCTAGTGCAAACTTGTTGGCAATA
TCTTCACTTCCTGTCACATTTTTAACAATCGTTTTAATTTCTTCACTAAC
ATCTTTGGGTTCAGCAGGTAATATGATACTTGATGTTGTATAGCTTTCGT
CGTCAGGTGAGAAGGGTACTTCAAACTGGGCAGGTGCCGGGCCTAGCTCA
GTTTCAGGTACATTGTTTTCCGTAAACACAGTTTTTAATCCGGAAAATTC
CTCCCTTTCTGCTGGTAGAGCACTCAATCTTTCAAACATTATATCAACAT
CAAAATAATAAGGGTTtggaaaatgctcaaaatattTGTTAGTCAATGTT
CTATTTTTATGGTCTGGTCCGccatatttttttgtattaacTTTAATTGT
GTTATAGCCACCGTTTGGGATACCAAAGCATAAACATTTCAATGCAATTT
CAACTGCTTGTCTTTGTACAGTGAAATGTCGGACTTTCTGTTGCTTTTGA
CCTTTGCGTTTTAAGNTGTGTTATAACCACCGTTTGGTATACCAAAGCAC
AAACATTTCAATGCAATTTCAACTGCTTGTCTTTGTACAGTGAAATGCTt
gattttctgttgttttttacCTCTGCGTGTTAAGACAACAATGCCTACCT
GCTCAGGAAGTTTAGGTAACTGGGTGGCGATTGACATCCTCTGAGGGATG
CTTATAGAATGGCCCTTAGATGACAACATGCCATACCTCAGCATGTGAAC
ACGCATACAGACAGTTATTTTAGATATGAGTGCCAATTCAACAGTtgtaa
gatttttcaaacattctggAATTGGACCAAAGTGCATGTTATTATGCCTA
ATTATGTCTTGCTTTGGACCAAGATCACTTTCAGGACTATCAATACCTGA
CCACTTTGCAGCTCTAAgctcttgattttctttattattggatttatttt
tcttagtACATTTTACATCTTGATTTTCATTGCTTGCGGTCTTTTTTGGT
TTGCGCTTTTTACTGTCTGTGACACATTTTGGacagatatttttttttat
tgagtTTTATATTATTTAAATTGACTAAGCGATTATCTTTGTTTTCAAAA
GATGTGTGGAATTGAGGATGTGTTTCCATACATATATCGCATTTCAAAAA
CGTGTGACTCATTTCcccattttcaaatcttttaatTGATTCATACACTT
TAGGATTCTTATGAATGGCTGAGGAGACATTAGAAGTGACACCTGAGGAT
ATTTCATTGTCCTCTTGGACGATCGGCTGTTCCGTTTCTGGTATTGAACT
CAAAATTTCAGGACTCTCATTTTTAACTTGATTTGGGtaatttattttaa
ttattgGCTTATCaagtgaaaatttcttcaaaggAAAGGTACATATAGCT
TTGCCATAATACTTAGGATTACTCTTGTTTGAAATAGAATTAATAGAAGT
GATTGAAAAATCAAATGTGGGTTTGTCAATTTGAGGTTGATTAGGAGGTA
TATTTGAATTGTTGACAAGACTgggaaattgttttttaaagacTGGTGTT
TTTTCATCTATAGCACATGCTTTAAAGTGAAAGTCTTCCTTTTTGTTTTC
AggacatttttttttgtgtttaatTTCATCTCGCATTGTTTTTCTTCGTT
TCCTTATGGCGGTGGTTgattcattttcctttgacggTAAAAATGTAATC
CCATATAAATCACATTCTTTCTGTAGAATTTGGTCAGCTTTGTTTCTTCG
GTTGTTGTTAACCTCATTAGGTGTAGTTGTTGTCAGCGTTGGTTTTGTTA
GGAAGGATATCAGAGgagaatttgtttttgtttgattaaTATTTAATTGC
AAATTAGAGAAGTGACAGGCATGATTAGCAAAAGATGTAAcaacatttga
tttttttatacaTTAATAAATAGGGCACAATATGGTCATTCACTTTACAG
TTAAAATTAGGGTTGTTGATAGGATTCACTCTGGCATCGTCCACAGAAAA
CCACTGTTCACCATATTTTACAGCTGATGTGTAATGGCCGCTATTTGCAG
TTTCGCCATGGTGAAAGATGACTGGTTGTAATTGTAAAGTTCCCAATAGA
ATATTGTCAATTTGATTCTCAATTGTAATTTCTGGAATTACTTTTCTACA
AGTATTTGTTGCTTGATCAAAACGAAATACACCCAAGGAAATAATCAGAT
AATCAGAAACATGGAGCAGTGTTGTTGATTTTAATGCCATCGTTCGAATG
GGACAGTTAGAACACACATATGGCTCATCAAGCAGCTCTGCGTTTTGTGC
ATTTATCAGTTtcaaaagttctttttcaatggAATTGTTATATAAGTTAG
AAAATTTAATACAGCATATAGAATCATACatatttttctctgaaatttgT
TGACAGTTTTTACAAAGCAATTCCTCTAACATTGCaattttaaaaatcga
agcgtCTAACACAGTATTATCTGCATTTGATGGATAAATAATTTCCAATA
TATGTAAAAGACATTCTTGAGCATCAAACTGCTCAAATCTGGAATGGTCG
TATCCCCCAATGCCAAAGAAAGGTAGTAGTTGATATGTTTCTATCGGAAC
AGCCGAAGATGTCATTGATGTAAATAATTCATTGATCGCCATTGTTTTAA
CTGGGGTACTGAcattaatttcaaaatgacaaaCACGTTCCCGAAGACTT
TTAATAGAATACAATGCTTGGACGAGTGAATTAAAGAAACAAACATTTTG
ACCAAGATTTTTAAGGCCTAAAGGTGCCGTCCTTGATTGCAAAATATTCA
TCTTTGCAGAACAATGTGTTATTAGCTGNACACGTTCCCGAAGACTTTTA
ATCGAATACAATGCTTGGACGAGTGAATTAAAGAAACAAACATTTTGACC
AAGATTTTTAAGGCCTAAAGGTGCCGTCCTTGATTGCAAAATATTCATCT
TTGCAGAACAATGTAAAGTGACAATTATTAGCTGGTGGTGTTAGTTAGGA
GTATATTATCACAACTCTGTTGGAGTGAAAACCTTTTACTACAGTTTCTA
CAGAAAATGTGcaaagttaaaaacaaaaaagtaaatataCTTCCCTAGCT
AGCTGGAAACAGTTGAACGAACCACCAGAACAAATCGATGATGGGAACCA
ACAGCAG
Run BLAST on NCBI

transcript from alignment at sc0000644:14667..21549-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027751 ID=TCONS_00027751|Name=TCONS_00027751|organism=Clytia hemisphaerica|type=transcript|length=6883bp|location=Sequence derived from alignment at sc0000644:14667..21549- (Clytia hemisphaerica)
TCGATTTCCTTTGAGAAGTCTCGTTTTAACGAAAGGATTCACAAAAGTAA AATGGCGTAGATTTTACATTTATTTGACCTTGCCGAAGTTTCTGTTCGCT AAATTTGTACGTCCAAAGTATTTTGAATCGGTCCATCTTTGCTTTCAATA CGGTTGACAAATTATTTCAAAGAACAATATACACAGGTACAAGCTGCATT TCCACTGGTACATACACTGGTTATGATACCATCGTTGCAAAGTACATCAA ATTCATTTAGCAGCTGAAGATACTTTGATTTATTTAAAAGATGCGAGTAC CTGGCAATAGTATTAGCAGATAGTTCATTTAGTCGCTTTTCTTCTTGATG GCGATTCTGCATTTGTGGATGGTTGTTGATGTAATCAAGCCGGTCTTGTG GTATTTTATCAATTAGACACCATCGATCCTCACTTTCAGCTCTCGATAAA GCAGTATAGGTTATTCCCAAACTTTGCTGTTCCATGTACTTAGCTTCTTG TATACTCACCCTCATGAATTCGGCAGGTTGATTATTTCCAACAGTGATAC CTTGAGCCTTAGCTATTGGGAGGGAATAACCAGGCATCAATGGTAAGCCA GCNATGGTATTGTGGCAACAGGAACATTTAAGTTGGCTAAATTCTTTCGG TTTTCTTTATTCACCTCACGCCAAGTTTCATGCAATGTTATTGTTGTTTC AGCATTGCAGTAATTCTTCTTTTCAGCCTCGGGAAGCTCTTTTTCGTATC TGGCATTTACAGCAAGCCAGTCTTGTTGGGTGATTCTGCCACCTCTAATT CTTAATAACCTTTCAAGAAACATTTTTTCACACTCTTTCTGTCGCATTGT CTGATTAAGAACAATGACGTCTTGAAAGTTTCGGTAAATGGCAAACCCGG CAAGCTCATCAGGTGAAGCATTCTTTGCAGGGCGGAGATGAAGATCTAAT TTTTTGACTGGCCCAAGCTGGCCAAGATCACCAAAAAAGTTCACAACTGG AATTGATCCGAAGGTATTGTCACAATTATTTGTGGCTTGGGNGAGTGAAC TGTCCGACCACCTGGGAGAAGCAAACTTGCTGTTCCAGTAGGAGCCAGAT TCAACACTGCATTATTTCTTTGACGTAATCTCCTTGCTATAAAACTAAGT GAATTTATGACAAAAGTTTTACCTGTACCTGCAGTCCCCTGTACCAATAA TCGTAACGGTTCATAGTTCTCCCCTTTCTGGAGTAAAATCATACGTTCTA GATTTATTGCTATTATTAGTCTTTGCAACTCGTTGGCTAAAAGTAGATTA ATTCTTGGCAAGTCACATCTACCGTACGAATTGACTGTTTGTTTCTCAAC TTCGGCATCCATATCATCCAACCAAGAGCCAACATTGTCTGGCCAAGCTT GTCCTAAGCATTGCATTGCATACTCATGCCAATCAAAGTCTGGTCCTCCA TCAAGTAATGGAACCTCAAGTTCCTCATCAACAGCATTCGAGGGATTAGC ATCGTGAAGCTCATTCAACAATTCATGAGCTACATTAACTTCCCTCATTT GATAATCTTGTGAAAAGTTACTGGAGGAAAAGGAGTATTGAGAATCAGCT TGTGACTCTTGATTTGCATTATCATTGTGCTGTTCATTTAGCTTGTGCCT TCTTTTACGTTCTCTCTCCATTTTTTCATCATATCTCTTTTTTGCTGATT TCACATTATCTTTAACAACACGTGGGCATTGATCTGTATCAAGAAAGCGT GCAAAAGCTTCACCAAAAGTTTCTTCTTCTATCTTCAAATCTTCAGGTTT TGTCCATACTCCAGGTGAAAACATCATGAGCTTACCTTTACAGTAGTCTT CTGAGAGTGGCCAGACAGGATTCACTTGGATACCTGTGAAAACTGGGCAG TGATCAGCAGCGCATTTGGTTCTGCAAGAACATTCTCTCACCCAATCATA TAAGGTCATTGTAGGATTCTTTTCTCTACGCTCATTACTTAGAAACTTAT CGATAGCAATTTTTTGAGTGAAGTTTTCACCATCAGGCTTATTGCTAAGA GGCCTATAATCACTCAAACCAACAGATTGAAACTTTCTAGTACAATGCCA CAGTTTGCCACCAGAATTGATAAAGTCACAACAAGCAGCAGGTGTATCAA TTTTACCAAGTATCCTATTGAGCAGTCTTAATACGATACTTTTAACTGAA GCATTGGGATCTGCACTGTCTAAAAGGTGACCATAGATAGTGACCAAATC CTGTGTTGCGGCAGCACCTTTGCATGCGTAAGATGTGATATATTTTTGTA AATTTAACAAATCTTGATCAACCAGAGCCTGAGTATCGCAGTTGGCCAAC CAGGATAATAAATGAGCTTTTACATTCATTATCATCCTGCAATGGTCTCT GGGGCCCTCATACCTTGGATGCTTATCTCCAGTTAGAATTGGGGCGAAAG GATGTAATTCTTTTCCTGGTGTTTTTTTAGTTATGGGATCTTCTTTTCCA AAATGGACCCTACAGTATCGTGTATCAGAGTCAACTCTTTTTCTTTTCAG ACAATAGTCATTACAATTATGTAATGCTACTCGATTCACAAGATAAAGAT ACAATTCTCTAACTTTTTCTGGGGTGGTGCAATATTCTGTCATTATAAGA TTCAGTGGGTCAATTTTAGGAGGCTCTTGGGTACCCTCTGGTTTTGCCCA TTTTTCCATATTTGGAATCCAGACTTTAGAGCCATCTTGGCCATTCTCTT GGGAGCCACCTGCAGGGTGCATACTAACAAAGCCTGGTGAAAATATGGTA TCTGTGTCTTCTTCATGTGTTTGAAGCCATTTATATAAGGTCTCAGCTTT TTCTTGGTCACTAGATAAACCATCTATATCAAGAGCTTGCTCGATATTTT TGGCTTGAGTTTCAGAAAATAGGAGTCCATGGCTGTGAATTTGTCCTCTT GATTTGGCAAATTCAAAGCGAAACCAATAATCAGTTAAGTTAAACAACTC TTTGGCTACTGTGTTATAGTAATTTATTGTCCTTGTCTCGAAATATAAAG TGGCAATGTGCAGATTTTGTAAAACTGTTCTTCTGAGATAATGCATATCT GTATTCAATTTATTTAAAATGTTATCATAAGTGATCTCACATGTAGAACT AATGTATTTAGCCAAAAATTGTTTAAGTGGAGCCCAGTGGAGTTCTGCCA TACTATTAGTATGAAAGTAACTTGGTAAATCCCCTATTGAGTATCTTCTA AAGAAAAGTAAAGCATCCAATTCTCTTTTGCATCTGTTCCAATATGGGTC AGAATTGACAAGATTGGAGCCCATCCTGATAACTTTTCTGGCAATTGAAT CGTCATTATTGTTAAAACGCTCTTTCAGTTCATCAATGCTAATGTGACTG TCGGTTAGCTGTTGCGCTACTAAAAAGTTGCCATTGTTTAAAGCTTTTTT ACGTAGTGATAGATTGTACAGAAAAAATTTTAAAAATGGATGTTTAGAGA CACGGTTATCCTTTTGAAAATAAATATGCTTTATCCATTCATCCAAACTG ACTGTCACCAAAGGATTATGGGTAAAGTCACAGGTAGCTGCTGTGAAGAT GGATGGAAAGGCTTGTGCAAAAAAGCCAGGAGTTTTTAATTCGGATAAAG GTTCAGCATCTGCATATTTCCATNATGGATGGAAAGGCTTGCGCAAAAAA GCCGGGAGTTTTTAATTCAGATAAAGGTTCAGCATCTGCATATTTCCATT CTGCTAGTGCAAACTTGTTGGCAATATCTTCACTTCCTGTCACATTTTTA ACAATCGTTTTAATTTCTTCACTAACATCTTTGGGTTCAGCAGGTAATAT GATACTTGATGTTGTATAGCTTTCGTCGTCAGGTGAGAAGGGTACTTCAA ACTGGGCAGGTGCCGGGCCTAGCTCAGTTTCAGGTACATTGTTTTCCGTA AACACAGTTTTTAATCCGGAAAATTCCTCCCTTTCTGCTGGTAGAGCACT CAATCTTTCAAACATTATATCAACATCAAAATAATAAGGGTTTGGAAAAT GCTCAAAATATTTGTTAGTCAATGTTCTATTTTTATGGTCTGGTCCGCCA TATTTTTTTGTATTAACTTTAATTGTGTTATAGCCACCGTTTGGGATACC AAAGCATAAACATTTCAATGCAATTTCAACTGCTTGTCTTTGTACAGTGA AATGTCGGACTTTCTGTTGCTTTTGACCTTTGCGTTTTAAGNTGTGTTAT AACCACCGTTTGGTATACCAAAGCACAAACATTTCAATGCAATTTCAACT GCTTGTCTTTGTACAGTGAAATGCTTGATTTTCTGTTGTTTTTTACCTCT GCGTGTTAAGACAACAATGCCTACCTGCTCAGGAAGTTTAGGTAACTGGG TGGCGATTGACATCCTCTGAGGGATGCTTATAGAATGGCCCTTAGATGAC AACATGCCATACCTCAGCATGTGAACACGCATACAGACAGTTATTTTAGA TATGAGTGCCAATTCAACAGTTGTAAGATTTTTCAAACATTCTGGAATTG GACCAAAGTGCATGTTATTATGCCTAATTATGTCTTGCTTTGGACCAAGA TCACTTTCAGGACTATCAATACCTGACCACTTTGCAGCTCTAAGCTCTTG ATTTTCTTTATTATTGGATTTATTTTTCTTAGTACATTTTACATCTTGAT TTTCATTGCTTGCGGTCTTTTTTGGTTTGCGCTTTTTACTGTCTGTGACA CATTTTGGACAGATATTTTTTTTTATTGAGTTTTATATTATTTAAATTGA CTAAGCGATTATCTTTGTTTTCAAAAGATGTGTGGAATTGAGGATGTGTT TCCATACATATATCGCATTTCAAAAACGTGTGACTCATTTCCCCATTTTC AAATCTTTTAATTGATTCATACACTTTAGGATTCTTATGAATGGCTGAGG AGACATTAGAAGTGACACCTGAGGATATTTCATTGTCCTCTTGGACGATC GGCTGTTCCGTTTCTGGTATTGAACTCAAAATTTCAGGACTCTCATTTTT AACTTGATTTGGGTAATTTATTTTAATTATTGGCTTATCAAGTGAAAATT TCTTCAAAGGAAAGGTACATATAGCTTTGCCATAATACTTAGGATTACTC TTGTTTGAAATAGAATTAATAGAAGTGATTGAAAAATCAAATGTGGGTTT GTCAATTTGAGGTTGATTAGGAGGTATATTTGAATTGTTGACAAGACTGG GAAATTGTTTTTTAAAGACTGGTGTTTTTTCATCTATAGCACATGCTTTA AAGTGAAAGTCTTCCTTTTTGTTTTCAGGACATTTTTTTTTGTGTTTAAT TTCATCTCGCATTGTTTTTCTTCGTTTCCTTATGGCGGTGGTTGATTCAT TTTCCTTTGACGGTAAAAATGTAATCCCATATAAATCACATTCTTTCTGT AGAATTTGGTCAGCTTTGTTTCTTCGGTTGTTGTTAACCTCATTAGGTGT AGTTGTTGTCAGCGTTGGTTTTGTTAGGAAGGATATCAGAGGAGAATTTG TTTTTGTTTGATTAATATTTAATTGCAAATTAGAGAAGTGACAGGCATGA TTAGCAAAAGATGTAACAACATTTGATTTTTTTATACATTAATAAATAGG GCACAATATGGTCATTCACTTTACAGTTAAAATTAGGGTTGTTGATAGGA TTCACTCTGGCATCGTCCACAGAAAACCACTGTTCACCATATTTTACAGC TGATGTGTAATGGCCGCTATTTGCAGTTTCGCCATGGTGAAAGATGACTG GTTGTAATTGTAAAGTTCCCAATAGAATATTGTCAATTTGATTCTCAATT GTAATTTCTGGAATTACTTTTCTACAAGTATTTGTTGCTTGATCAAAACG AAATACACCCAAGGAAATAATCAGATAATCAGAAACATGGAGCAGTGTTG TTGATTTTAATGCCATCGTTCGAATGGGACAGTTAGAACACACATATGGC TCATCAAGCAGCTCTGCGTTTTGTGCATTTATCAGTTTCAAAAGTTCTTT TTCAATGGAATTGTTATATAAGTTAGAAAATTTAATACAGCATATAGAAT CATACATATTTTTCTCTGAAATTTGTTGACAGTTTTTACAAAGCAATTCC TCTAACATTGCAATTTTAAAAATCGAAGCGTCTAACACAGTATTATCTGC ATTTGATGGATAAATAATTTCCAATATATGTAAAAGACATTCTTGAGCAT CAAACTGCTCAAATCTGGAATGGTCGTATCCCCCAATGCCAAAGAAAGGT AGTAGTTGATATGTTTCTATCGGAACAGCCGAAGATGTCATTGATGTAAA TAATTCATTGATCGCCATTGTTTTAACTGGGGTACTGACATTAATTTCAA AATGACAAACACGTTCCCGAAGACTTTTAATAGAATACAATGCTTGGACG AGTGAATTAAAGAAACAAACATTTTGACCAAGATTTTTAAGGCCTAAAGG TGCCGTCCTTGATTGCAAAATATTCATCTTTGCAGAACAATGTGTTATTA GCTGNACACGTTCCCGAAGACTTTTAATCGAATACAATGCTTGGACGAGT GAATTAAAGAAACAAACATTTTGACCAAGATTTTTAAGGCCTAAAGGTGC CGTCCTTGATTGCAAAATATTCATCTTTGCAGAACAATGTAAAGTGACAA TTATTAGCTGGTGGTGTTAGTTAGGAGTATATTATCACAACTCTGTTGGA GTGAAAACCTTTTACTACAGTTTCTACAGAAAATGTGCAAAGTTAAAAAC AAAAAAGTAAATATACTTCCCTAGCTAGCTGGAAACAGTTGAACGAACCA CCAGAACAAATCGATGATGGGAACCAACAGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015670XLOC_015670Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027751-exon-sc0000644-1575043694:17900..21549TCONS_00027751-exon-sc0000644-1575043694:17900..21549Clytia hemisphaericaexon
TCONS_00027751-exon-sc0000644-1575043694:14667..17823TCONS_00027751-exon-sc0000644-1575043694:14667..17823Clytia hemisphaericaexon
TCONS_00027751-exon-sc0000644-1510915933:17900..21549TCONS_00027751-exon-sc0000644-1510915933:17900..21549Clytia hemisphaericaexon
TCONS_00027751-exon-sc0000644-1510915933:14667..17823TCONS_00027751-exon-sc0000644-1510915933:14667..17823Clytia hemisphaericaexon
TCONS_00027751-exon-sc0000644-1491911889:17900..21549TCONS_00027751-exon-sc0000644-1491911889:17900..21549Clytia hemisphaericaexon
TCONS_00027751-exon-sc0000644-1491911889:14667..17823TCONS_00027751-exon-sc0000644-1491911889:14667..17823Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000644supercontigsc0000644:14667..21549 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.08646 2.95021 1.71957 1.01183 2.89473 2.46558 3.99108 4.73489 4.05791 2.99451 5.98124 5.17166 4.33756 5.06598 3.77942 3.82532 4.25643 5.386 4.33653 3.69954 6.30389 6.25614 2.15505 3.90354 10.981 11.1728 1.82994 1.1083 1.38616 1.36885
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR025476Helitron_helicase-like
IPR010285DNA_helicase_pif1-like
IPR027417P-loop_NTPase
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0000723telomere maintenance
Vocabulary: Molecular Function
TermDefinition
GO:0003678DNA helicase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006281 DNA repair
biological_process GO:0000723 telomere maintenance
molecular_function GO:0003678 DNA helicase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027751 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top