TCONS_00027767 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027767
Unique NameTCONS_00027767
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length411

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027767 ID=TCONS_00027767|Name=TCONS_00027767|organism=Clytia hemisphaerica|type=transcript|length=411bp
aaaaacagcaaaattctgtgaaaaagttCCCATATGAGATGAGgagtgaa
aaatacacacccccACCCCCAAAGTAGTAACGGGTACTAACACCACCACC
TGGCTATGGGTCAGTCAGTACCTTGTGTCTGTACCCCCTGTTGTGATTAC
AGCACAGTACAcaaagttgtttttttattttcctcatttttcatctttat
tttcccTTTTCTCTATTTTGTACAAAATGCCAttcttgaatatcttttca
cCAAGCATAAAATCACTATTATTGATTCTAGTTCAATCAAAAAGTGTTAG
CCTTTTTGTCTCCATTTCATCTACTAGTACTACAGTATTAAAAACATTGT
GTAAGTTTGCTCTTGTAAAAAAACAGGAGTCATTTCATGGAGCGATGAAG
TAAAGCCAGCT
Run BLAST on NCBI

transcript from alignment at sc0000644:111622..112032

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027767 ID=TCONS_00027767|Name=TCONS_00027767|organism=Clytia hemisphaerica|type=transcript|length=411bp|location=Sequence derived from alignment at sc0000644:111622..112032 (Clytia hemisphaerica)
AGCTGGCTTTACTTCATCGCTCCATGAAATGACTCCTGTTTTTTTACAAG
AGCAAACTTACACAATGTTTTTAATACTGTAGTACTAGTAGATGAAATGG
AGACAAAAAGGCTAACACTTTTTGATTGAACTAGAATCAATAATAGTGAT
TTTATGCTTGgtgaaaagatattcaagaaTGGCATTTTGTACAAAATAGA
GAAAAgggaaaataaagatgaaaaatgaggaaaataaaaaaacaactttg
TGTACTGTGCTGTAATCACAACAGGGGGTACAGACACAAGGTACTGACTG
ACCCATAGCCAGGTGGTGGTGTTAGTACCCGTTACTACTTTGGGGGTggg
ggtgtgtatttttcactcCTCATCTCATATGGGaactttttcacagaatt
ttgctgttttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015683XLOC_015683Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027767-exon-sc0000644-1491911889:111622..112032TCONS_00027767-exon-sc0000644-1491911889:111622..112032Clytia hemisphaericaexon
TCONS_00027767-exon-sc0000644-1510915933:111622..112032TCONS_00027767-exon-sc0000644-1510915933:111622..112032Clytia hemisphaericaexon
TCONS_00027767-exon-sc0000644-1575043694:111622..112032TCONS_00027767-exon-sc0000644-1575043694:111622..112032Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000644supercontigsc0000644:111622..112032 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.70253	0.513808	0.39772	1.55643	0	0	0.225803	0	0	0	0.355878	0	0.116808	0.121306	0.0997299	0	0	0.270277	0	0	0	0	0	0.732322	0.377137	0	0	0	0.194938	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027767 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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