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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027854 ID=TCONS_00027854|Name=TCONS_00027854|organism=Clytia hemisphaerica|type=transcript|length=967bp
CTAGGGGCTGGAGATGATGATCAACAAATGCCGAGTTTTAACCTGTTTAG
CCAGGGGCTGGAGATTATGATCAACAAATGCCGAGGTTTACTATATGTTT
TTGTTACTAGTATGAAAGAAAATATCGGTTTAAATAAATGCCACGCCAAA
AGAAAGCTTATTTAACGCCCTTTCCGAGCGTCAAAGTTCCTTATCTACTT
TGGTTTACGGGTTGTTTCAAAATATGGGTTTTAGTTCCATGACAATCGAG
CAAAAGTGTAAACAAAATGGAAGCAAGTTCTGTGATTTTGAAACTGTATT
TTGTTGGTGTAAAGCCATTTTATTTGCATGAAATGACATTGCTGATGGAT
TATTCTTATTGTAATTTGTTGTTGAAGAGTTCTTGGATGTATTTGGACAA
GCTTTTGTGTTGTTAATATCCTGAAGAGGTTGGCTATCCGGTACAAAACC
ATTTGTCGTTATGTGATTTTCTGGAAGGATTTCTGCAGCTCTTCTTGACA
TTCAAACTATTTTGTGATTTACTATGAACCACTAGTTAATTGGAGTAACC
AGAAAATTCCATTGTACCATCAATTAGACGTCCACAATACAATAAATGGT
GTATATACTTATATGGCTTCGAGAGGGTTGAAATCTGGTATGAGCAACCG
ATCGCGCAGACCTCGCACCTTGAACGACAACATAAAAAACCCTAATTGAC
AGTCAGAGACTGACTCCATTTGATTGAAAATGCATGATAATATTTTATTG
AGTGAACTGAAATGAAATATACCCAAGATTTGGTGAATAAAGAGTCAAAA
TGGACTTTGCGCAAGCCAAATACATGATTTTTGTTAGTTTGGCGCAACAC
GAAATAGGACAAAATGCAAGGATTTTGGACGTTATTGATGATTACACTGG
TTATGTGATATAAATTATGGATTATTTTACAAATACAGTCAAAAGGCTGA
AAAAACTAggttaaaaa Run BLAST on NCBI transcript from alignment at sc0000647:86834..87800 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027854 ID=TCONS_00027854|Name=TCONS_00027854|organism=Clytia hemisphaerica|type=transcript|length=967bp|location=Sequence derived from alignment at sc0000647:86834..87800 (Clytia hemisphaerica)
tttttaaccTAGTTTTTTCAGCCTTTTGACTGTATTTGTAAAATAATCCA
TAATTTATATCACATAACCAGTGTAATCATCAATAACGTCCAAAATCCTT
GCATTTTGTCCTATTTCGTGTTGCGCCAAACTAACAAAAATCATGTATTT
GGCTTGCGCAAAGTCCATTTTGACTCTTTATTCACCAAATCTTGGGTATA
TTTCATTTCAGTTCACTCAATAAAATATTATCATGCATTTTCAATCAAAT
GGAGTCAGTCTCTGACTGTCAATTAGGGTTTTTTATGTTGTCGTTCAAGG
TGCGAGGTCTGCGCGATCGGTTGCTCATACCAGATTTCAACCCTCTCGAA
GCCATATAAGTATATACACCATTTATTGTATTGTGGACGTCTAATTGATG
GTACAATGGAATTTTCTGGTTACTCCAATTAACTAGTGGTTCATAGTAAA
TCACAAAATAGTTTGAATGTCAAGAAGAGCTGCAGAAATCCTTCCAGAAA
ATCACATAACGACAAATGGTTTTGTACCGGATAGCCAACCTCTTCAGGAT
ATTAACAACACAAAAGCTTGTCCAAATACATCCAAGAACTCTTCAACAAC
AAATTACAATAAGAATAATCCATCAGCAATGTCATTTCATGCAAATAAAA
TGGCTTTACACCAACAAAATACAGTTTCAAAATCACAGAACTTGCTTCCA
TTTTGTTTACACTTTTGCTCGATTGTCATGGAACTAAAACCCATATTTTG
AAACAACCCGTAAACCAAAGTAGATAAGGAACTTTGACGCTCGGAAAGGG
CGTTAAATAAGCTTTCTTTTGGCGTGGCATTTATTTAAACCGATATTTTC
TTTCATACTAGTAACAAAAACATATAGTAAACCTCGGCATTTGTTGATCA
TAATCTCCAGCCCCTGGCTAAACAGGTTAAAACTCGGCATTTGTTGATCA
TCATCTCCAGCCCCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027854-exon-sc0000647-1491911889:86834..87800 | TCONS_00027854-exon-sc0000647-1491911889:86834..87800 | Clytia hemisphaerica | exon |
| TCONS_00027854-exon-sc0000647-1510915933:86834..87800 | TCONS_00027854-exon-sc0000647-1510915933:86834..87800 | Clytia hemisphaerica | exon |
| TCONS_00027854-exon-sc0000647-1575043694:86834..87800 | TCONS_00027854-exon-sc0000647-1575043694:86834..87800 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000647 | supercontig | sc0000647:86834..87800 . |
Blast
The following BLAST results are available for this feature:
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