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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027884 ID=TCONS_00027884|Name=TCONS_00027884|organism=Clytia hemisphaerica|type=transcript|length=1140bp
TGTTCCTAACTTTACGTAACTTTAACAATGCCGAAAGATCAGCTGTTGAA
AATcttatctttttataagaactgttACAGCTAATCTGCTTGGTTAATAT
CTCAGATTTAGAATCTGCTTCCGTTTTGGCTCAGGTGTTGAATGTAGCAG
AACCAAAATGGAAGCAGTTGTAAAAACATAAGGAAAActggttttatgtt
ttataaactcctttatttttatttcaaagtctttGGATCTCAATATCTCC
CTAAAACAGTTCCCAGACTCTTATCTAGAATGTGCTTCCATTTTGGTTCG
GGTGATGAATATGGCAGAACCAAAATGGAAGCAGTCGTAAAAACATAAGG
AAAActggttttatgttttataaactccttcatttttatttcaaagtctt
tGGATCTCAATATCTCCCTAAAGTAAAACAGTTCCCAGACTCTTATCTAG
AATGTGCTTCCATTTTGGTTCGGGTGTTGAATATAGCAGAACCAAAATGG
AAGCAGTCGTAAAAACATAAAGATAActggttttatgttttataaactcc
tttcatttttatttcaaagtagtTGGATCTCAATATCTCCCTAAAACAGG
TCCCAGATTCGTATCTAGAATCTGCTTCCATTTTGGTTCGGGTGTTGAAT
ATAGCAGAACCAAAATTGAAGCAGATCTAAATCGCAATTCGGAATACCTT
TCTAAAGAAGAATTACACCGTTAGACTCCCAAAACACTTCGAAATGAAAA
TATGTAAATGAGTAGATAACATAGAATCAGTTTTTCTTATGATTTTACTA
GTGCTTCCATTTTGGTTCTGCTATATTCAACACATGAACCAAAATGGAAG
CAGATTCTAAATTAGAATACTATGAGATGTGTTAGGGAGATACTGAGGGA
TATTGACATCCAAAACACttcaaattaaatcaaaacgaaaataattttaa
ttgttttaattttcttaatgtTTTCACAAGTGCTTCCATCTTGGTTCCGT
GATATTCAAAACCTAAACCAAACTGGAAGCAGAACCTAAATCCGAATCTT
TAATTACATAACGCCTTTACATTGCTTAAAAGACTTAAACTTCTCTCTTC
AATCCACAAAACTTACGCTCACtgtaagttcttataaaaa Run BLAST on NCBI transcript from alignment at sc0000649:127361..128500 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027884 ID=TCONS_00027884|Name=TCONS_00027884|organism=Clytia hemisphaerica|type=transcript|length=1140bp|location=Sequence derived from alignment at sc0000649:127361..128500 (Clytia hemisphaerica)
tttttataagaacttacaGTGAGCGTAAGTTTTGTGGATTGAAGAGAGAA
GTTTAAGTCTTTTAAGCAATGTAAAGGCGTTATGTAATTAAAGATTCGGA
TTTAGGTTCTGCTTCCAGTTTGGTTTAGGTTTTGAATATCACGGAACCAA
GATGGAAGCACTTGTGAAAacattaagaaaattaaaacaattaaaattat
tttcgttttgatttaatttgaaGTGTTTTGGATGTCAATATCCCTCAGTA
TCTCCCTAACACATCTCATAGTATTCTAATTTAGAATCTGCTTCCATTTT
GGTTCATGTGTTGAATATAGCAGAACCAAAATGGAAGCACTAGTAAAATC
ATAAGAAAAACTGATTCTATGTTATCTACTCATTTACATATTTTCATTTC
GAAGTGTTTTGGGAGTCTAACGGTGTAATTCTTCTTTAGAAAGGTATTCC
GAATTGCGATTTAGATCTGCTTCAATTTTGGTTCTGCTATATTCAACACC
CGAACCAAAATGGAAGCAGATTCTAGATACGAATCTGGGACCTGTTTTAG
GGAGATATTGAGATCCAactactttgaaataaaaatgaaaggagtttata
aaacataaaaccagTTATCTTTATGTTTTTACGACTGCTTCCATTTTGGT
TCTGCTATATTCAACACCCGAACCAAAATGGAAGCACATTCTAGATAAGA
GTCTGGGAACTGTTTTACTTTAGGGAGATATTGAGATCCaaagactttga
aataaaaatgaaggagtttataaaacataaaaccagTTTTCCTTATGTTT
TTACGACTGCTTCCATTTTGGTTCTGCCATATTCATCACCCGAACCAAAA
TGGAAGCACATTCTAGATAAGAGTCTGGGAACTGTTTTAGGGAGATATTG
AGATCCaaagactttgaaataaaaataaaggagtttataaaacataaaac
cagTTTTCCTTATGTTTTTACAACTGCTTCCATTTTGGTTCTGCTACATT
CAACACCTGAGCCAAAACGGAAGCAGATTCTAAATCTGAGATATTAACCA
AGCAGATTAGCTGTaacagttcttataaaaagataagATTTTCAACAGCT
GATCTTTCGGCATTGTTAAAGTTACGTAAAGTTAGGAACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027884-exon-sc0000649-1491911889:127361..128500 | TCONS_00027884-exon-sc0000649-1491911889:127361..128500 | Clytia hemisphaerica | exon |
| TCONS_00027884-exon-sc0000649-1510915933:127361..128500 | TCONS_00027884-exon-sc0000649-1510915933:127361..128500 | Clytia hemisphaerica | exon |
| TCONS_00027884-exon-sc0000649-1575043694:127361..128500 | TCONS_00027884-exon-sc0000649-1575043694:127361..128500 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000649 | supercontig | sc0000649:127361..128500 . |
Blast
The following BLAST results are available for this feature:
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