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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027907 ID=TCONS_00027907|Name=TCONS_00027907|organism=Clytia hemisphaerica|type=transcript|length=1593bp
GAGACAAAGGTCATATACAGCCATcattaaataaaaagaataaaaaaata
aattataaaataaaggACCATATAATTGAAAGGTTTCCATTTAATATAAT
ATCTCTTTTTTTACAAGGTCAAATTATTAAACAATCAACTTaacaataaa
tttttaaaaaattggtcaAGGGCGATGAcagcaaaaaaagctaaaattca
TGCGAAAGGTACTGTGACAGTGTGGCAAATAACTAAAAATAAGGTGTTTA
ACAAAAGCATAACAGATAATAGGGgttagtatttttttaatacaTCGAAG
CTTAAAATCTAACATCTAATGGAACGAAGTAAAAAAGtgcaagaatgaac
aaaaatataaaCTATCTTTAATAATATGTAAAAAACATTTTGtggtattt
acaaattttattttcaaaaaaaatcaacaaaagaaataaatttttcaaca
aCTAAATAATCCGtctttataaatttttgaagATCCCCCATTAAAATCTA
GACCAATACGAATTTAGAATAACTACAATGTATaaagcttgaaaataatc
tGCAGTGCGACAAAAAAAAGATTAactcataaaaaaacaaattttgattt
ttatagatTGTGCATAACAATTCTAATaactttgttcttaaaaaaatttt
cataattcttAATTAATATTAAatgtcaaaattaaattatGTCAAGATgg
ctaatttttctttttaaaaaacaaaacattttcacaagattcatgaattt
taaaaaatatactgAATTAGATATAATAAGTCTCTGTAAAAGTAAAATTG
TTTCCATACTGCCTAagcaaattttaagatattaagaATGACTTGATTCA
GCTGCCTTAGTTTTGATTGAGAATTCCGTAGACCTTGAATAACAGCGCAT
GCTCTATTTTATAGCCTTGCTATAAAAGCAGAAATATCCGATTTGAGCTT
GGAAAGGGTTACAAGCAGAAAAATGCCTTCAAGGCAAGATTTTGCCTGCA
GACTGTTAGTATACATCGGCAATGTTATCTAGGGGTAGGTTTTGTATAAA
GACTTCAGATTAGACCATGGGATCTTGTAACTTAGAAAATGCCATGAAGC
TTTATTACTtttgaaccagtgaaccagtcAACTGCTACATAATCCATTTC
AGCAAAAGGTCACACCAGATAGAAAAACACAATCAAGCCAAACACTTCCA
CTACATTGGACCATCAATGAAAACCAGAGAAGATTTCTCAAATCTAACTG
TGGCAATGAATTTTTTCGCTACAACTACAAGACATACAGCTCATTTTCTC
AAACTCCAAATCTTATACCTTTGGACCACTTCTATCATTCGTTTGTGTTT
TCTTCAAACCGCCCTTGAAACCACTAATAGAGCTCAACAGGGCGCCTCTT
CCTTCTTGGGTGGGTGGTGGCGGACTTTTAGGAGCGTTATTTGTTGGTGC
AGGTGGAGGGGGTGGCGCAACTGGGGCGCTTGATTCAGTGGGCGTTTTTG
GTGCTTTTGATATAGACGCTTGCTTGGTAACTGGTGGTTTTGCTAAGAAA
TATGTAAAACAAAGGACTTGCAAAATGGGTATAACTAATCCAA Run BLAST on NCBI transcript from alignment at sc0000653:102783..104375 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027907 ID=TCONS_00027907|Name=TCONS_00027907|organism=Clytia hemisphaerica|type=transcript|length=1593bp|location=Sequence derived from alignment at sc0000653:102783..104375 (Clytia hemisphaerica)
TTGGATTAGTTATACCCATTTTGCAAGTCCTTTGTTTTACATATTTCTTA
GCAAAACCACCAGTTACCAAGCAAGCGTCTATATCAAAAGCACCAAAAAC
GCCCACTGAATCAAGCGCCCCAGTTGCGCCACCCCCTCCACCTGCACCAA
CAAATAACGCTCCTAAAAGTCCGCCACCACCCACCCAAGAAGGAAGAGGC
GCCCTGTTGAGCTCTATTAGTGGTTTCAAGGGCGGTTTGAAGAAAACACA
AACGAATGATAGAAGTGGTCCAAAGGTATAAGATTTGGAGTTTGAGAAAA
TGAGCTGTATGTCTTGTAGTTGTAGCGAAAAAATTCATTGCCACAGTTAG
ATTTGAGAAATCTTCTCTGGTTTTCATTGATGGTCCAATGTAGTGGAAGT
GTTTGGCTTGATTGTGTTTTTCTATCTGGTGTGACCTTTTGCTGAAATGG
ATTATGTAGCAGTTgactggttcactggttcaaaAGTAATAAAGCTTCAT
GGCATTTTCTAAGTTACAAGATCCCATGGTCTAATCTGAAGTCTTTATAC
AAAACCTACCCCTAGATAACATTGCCGATGTATACTAACAGTCTGCAGGC
AAAATCTTGCCTTGAAGGCATTTTTCTGCTTGTAACCCTTTCCAAGCTCA
AATCGGATATTTCTGCTTTTATAGCAAGGCTATAAAATAGAGCATGCGCT
GTTATTCAAGGTCTACGGAATTCTCAATCAAAACTAAGGCAGCTGAATCA
AGTCATtcttaatatcttaaaatttgctTAGGCAGTATGGAAACAATTTT
ACTTTTACAGAGACTTATTATATCTAATTcagtatattttttaaaattca
tgaatcttgtgaaaatgttttgttttttaaaaagaaaaattagccATCTT
GACataatttaattttgacatTTAATATTAATTaagaattatgaaaattt
ttttaagaacaaagttATTAGAATTGTTATGCACAatctataaaaatcaa
aatttgtttttttatgagtTAATCTTTTTTTTGTCGCACTGCagattatt
ttcaagctttATACATTGTAGTTATTCTAAATTCGTATTGGTCTAGATTT
TAATGGGGGATcttcaaaaatttataaagaCGGATTATTTAGttgttgaa
aaatttatttcttttgttgattttttttgaaaataaaatttgtaaatacc
aCAAAATGTTTTTTACATATTATTAAAGATAGtttatatttttgttcatt
cttgcaCTTTTTTACTTCGTTCCATTAGATGTTAGATTTTAAGCTTCGAt
gtattaaaaaaatactaacCCCTATTATCTGTTATGCTTTTGTTAAACAC
CTTATTTTTAGTTATTTGCCACACTGTCACAGTACCTTTCGCAtgaattt
tagctttttttgctgTCATCGCCCTtgaccaattttttaaaaatttattg
ttAAGTTGATTGTTTAATAATTTGACCTTGTAAAAAAAGAGATATTATAT
TAAATGGAAACCTTTCAATTATATGGTcctttattttataatttattttt
ttattctttttatttaatgATGGCTGTATATGACCTTTGTCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027907-exon-sc0000653-1491911889:102783..104375 | TCONS_00027907-exon-sc0000653-1491911889:102783..104375 | Clytia hemisphaerica | exon |
| TCONS_00027907-exon-sc0000653-1510915933:102783..104375 | TCONS_00027907-exon-sc0000653-1510915933:102783..104375 | Clytia hemisphaerica | exon |
| TCONS_00027907-exon-sc0000653-1575043694:102783..104375 | TCONS_00027907-exon-sc0000653-1575043694:102783..104375 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000653 | supercontig | sc0000653:102783..104375 . |
Blast
The following BLAST results are available for this feature:
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