TCONS_00027958 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027958
Unique NameTCONS_00027958
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length231

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027958 ID=TCONS_00027958|Name=TCONS_00027958|organism=Clytia hemisphaerica|type=transcript|length=231bp
TTTTTAGAATGTGTTGTAGGACTAAATAATGAAATTGCTGACTGACTGAT
TTTACATCAAATTTACTCCTTAAACGTTCAAAGAATATCAAAGGATTCGA
ATCATATTCACCATGAAATTTGCCTATAGATTCACTTAAAAAACCCACTC
TTTTAGAGAAGGCAATATTTTGCAAAGCAAAGTCATCTAAATAAAGGTAG
TGGGCCACTAGAGGAAAATTAAGGCAAAAAC
Run BLAST on NCBI

transcript from alignment at sc0000658:164520..164750

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027958 ID=TCONS_00027958|Name=TCONS_00027958|organism=Clytia hemisphaerica|type=transcript|length=231bp|location=Sequence derived from alignment at sc0000658:164520..164750 (Clytia hemisphaerica)
GTTTTTGCCTTAATTTTCCTCTAGTGGCCCACTACCTTTATTTAGATGAC
TTTGCTTTGCAAAATATTGCCTTCTCTAAAAGAGTGGGTTTTTTAAGTGA
ATCTATAGGCAAATTTCATGGTGAATATGATTCGAATCCTTTGATATTCT
TTGAACGTTTAAGGAGTAAATTTGATGTAAAATCAGTCAGTCAGCAATTT
CATTATTTAGTCCTACAACACATTCTAAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015817XLOC_015817Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027958-exon-sc0000658-1491911889:164520..164750TCONS_00027958-exon-sc0000658-1491911889:164520..164750Clytia hemisphaericaexon
TCONS_00027958-exon-sc0000658-1510915933:164520..164750TCONS_00027958-exon-sc0000658-1510915933:164520..164750Clytia hemisphaericaexon
TCONS_00027958-exon-sc0000658-1575043694:164520..164750TCONS_00027958-exon-sc0000658-1575043694:164520..164750Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000658supercontigsc0000658:164520..164750 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027958 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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