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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027990 ID=TCONS_00027990|Name=TCONS_00027990|organism=Clytia hemisphaerica|type=transcript|length=1009bp
ttgcggacaaagctagaacatcaattgttttctgaaacaatgaaaataca
atgatcgctctccatcgttttatgagtcgtttatccagtgtataataaat
ctttgccCCAACCTAATTCAACTTCATATTCATTTACTTAGTTTGCTTTT
TCTATGTCAGTAATGCAAGTTGATGGATACGATGCTGATAAAAGAGATCA
TACATTCTCTGAGaaagtatcaaaaattgtttattttgtggTATACCTTG
CTCTGTTGTTGTATCTTTGTGGACTATCAGATCTCGCCCGAATAATATAC
TGTTTTGCCTCACATATCTAGACGATGATAAAGACAGTCATGTACAGTCA
CTATATTTTTGTACGACGGTATAAAAATCCCAAAATTGACGATGTGCTTC
CATAATACGAACTTTTATGAAGATGACCAGCATACGCTGATTGAAGCATT
TTTACAAAAAGCGTCTCTATGCTTGTTACCAATCTCCTCAAAAGCTTTCC
ACGTCACTAAGGGTTGATATGTACATCGTTATACAAACTCGAAGACCTTT
AACCCAAAGTTAACAGTACCATAACCAAAATGAAACTTacaaattggcac
aaaattaaTCCAAGTGTCATATATTTAGGCCAAGAACTATAACAGTTTAA
AAAGTCTTCCGTGTATAATATAACTTCACACGCATCTAAATTACGTCGTC
GCATATTATCTTCCAATATTTCTTGTTCATGTTGTGAGATAGTATGTAAT
CGTGTTATGGTGCTGTATGTCGTTTTTATGAAGCGAATGTTTGCACTGAA
ATGGAATAATGTGAGTTCATGTGATTCTCCAGAATCGACTAATCCAATAG
TCCCACTTGGTACTCGGAATGTAAACCAAGCTCGTTTCCAGTCTTTTCGA
TTctgaatcaaaacaaacaaaacgtAGAAATGCCACAAGAGTGCCATGAA
TGATGTCACAAAAAAGAACCATGCTAATCCATGAAAAACATCCGATTCCC
TAACAGGTT Run BLAST on NCBI transcript from alignment at sc0000660:78867..79875 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027990 ID=TCONS_00027990|Name=TCONS_00027990|organism=Clytia hemisphaerica|type=transcript|length=1009bp|location=Sequence derived from alignment at sc0000660:78867..79875 (Clytia hemisphaerica)
AACCTGTTAGGGAATCGGATGTTTTTCATGGATTAGCATGGTTCTTTTTT
GTGACATCATTCATGGCACTCTTGTGGCATTTCTacgttttgtttgtttt
gattcagAATCGAAAAGACTGGAAACGAGCTTGGTTTACATTCCGAGTAC
CAAGTGGGACTATTGGATTAGTCGATTCTGGAGAATCACATGAACTCACA
TTATTCCATTTCAGTGCAAACATTCGCTTCATAAAAACGACATACAGCAC
CATAACACGATTACATACTATCTCACAACATGAACAAGAAATATTGGAAG
ATAATATGCGACGACGTAATTTAGATGCGTGTGAAGTTATATTATACACG
GAAGACTTTTTAAACTGTTATAGTTCTTGGCCTAAATATATGACACTTGG
AttaattttgtgccaatttgtAAGTTTCATTTTGGTTATGGTACTGTTAA
CTTTGGGTTAAAGGTCTTCGAGTTTGTATAACGATGTACATATCAACCCT
TAGTGACGTGGAAAGCTTTTGAGGAGATTGGTAACAAGCATAGAGACGCT
TTTTGTAAAAATGCTTCAATCAGCGTATGCTGGTCATCTTCATAAAAGTT
CGTATTATGGAAGCACATCGTCAATTTTGGGATTTTTATACCGTCGTACA
AAAATATAGTGACTGTACATGACTGTCTTTATCATCGTCTAGATATGTGA
GGCAAAACAGTATATTATTCGGGCGAGATCTGATAGTCCACAAAGATACA
ACAACAGAGCAAGGTATAccacaaaataaacaatttttgatactttCTCA
GAGAATGTATGATCTCTTTTATCAGCATCGTATCCATCAACTTGCATTAC
TGACATAGAAAAAGCAAACTAAGTAAATGAATATGAAGTTGAATTAGGTT
GGggcaaagatttattatacactggataaacgactcataaaacgatggag
agcgatcattgtattttcattgtttcagaaaacaattgatgttctagctt
tgtccgcaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027990-exon-sc0000660-1491911889:78867..79875 | TCONS_00027990-exon-sc0000660-1491911889:78867..79875 | Clytia hemisphaerica | exon |
| TCONS_00027990-exon-sc0000660-1510915933:78867..79875 | TCONS_00027990-exon-sc0000660-1510915933:78867..79875 | Clytia hemisphaerica | exon |
| TCONS_00027990-exon-sc0000660-1575043694:78867..79875 | TCONS_00027990-exon-sc0000660-1575043694:78867..79875 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000660 | supercontig | sc0000660:78867..79875 . |
Blast
The following BLAST results are available for this feature:
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