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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028015 ID=TCONS_00028015|Name=TCONS_00028015|organism=Clytia hemisphaerica|type=transcript|length=477bp
CCAATTGAAAGCTTTCAACCACCAAGCTCTGACTTCAACCGAATAagaat
caaccaatcaatgaGCAAGAGTGCTGAACCAAGAATTACAGCTTTCACAA
CTTTAATTGATGACTCTTTACCGTCTACTCCTGATGAAAATTCATTCCTT
GTTCCGTCAAAAAGTACAACAGAGGATGATACTTCATCAAAAATAGAGAC
AGGATATTCTTCGGAGCCGGCAAAAAGACACACTAAAACTGTTGTTGCAG
AAACCAtaaaaatcaatagaaacacAGAATGCTGCGGTAAAACAATTGGA
TCCGTAATTAAAACAGCCGAATCTCTCAACAAAACCAAATCTGTTTTGAC
TCCTTCGACGATTCTGACGACGTTTTCGTCCAAAGTAAATTCGGGAATGT
CCCTAGCGAAATCAAGAATTGAGCCCATTTCGACTTCAAATGATAACACC
ACCTCTAATAAAGAGAACGTATCACCC Run BLAST on NCBI transcript from alignment at sc0000661:79097..80145+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028015 ID=TCONS_00028015|Name=TCONS_00028015|organism=Clytia hemisphaerica|type=transcript|length=1049bp|location=Sequence derived from alignment at sc0000661:79097..80145+ (Clytia hemisphaerica)
CCAATTGAAAGCTTTCAACCACCAAGCTCTGACTTCAACCGAATAagaat
caaccaatcaatgaGCAAGAGTGCTGAACCAAGAATTACAGCTTTCACAA
CTTTAATTGATGACTCTTTACCGTCTACTCCTGATGAAAATTCATTCCTT
GTTCCGTCAAAAAGTACAACAGAGGATGATACTTCATCAAAAATAGAGAC
AGGTAAGCGAGCTTAAATTTCTTTTCTGTAACCTCCagctttcatttttc
aatcgaGCCCTTTCTTCACAATTTTCCTAAATATTTTACGTACCCAACCT
cgcaaaaatcgccatttatcAAGTTTATCTGGTGTTCAAATCTTTGCATC
CGGCAACTTATCCCGGGCTGCAAACTAGCAGAGCTACTGCAAATAGTTAT
CATCGGTTTTTCTTGAAACtctttaaaacttatttttatctTCCTTTGTA
TGTTACCTTTCTAGGATATTCTTCGGAGCCGGCAAAAAGACACACTAAAA
CTGTTGTTGCAGAAACCAtaaaaatcaatagaaacacAGAATGCTGCGGT
AAAACAATTGGATCCGTAATTAAAACAGCCGAATCTCTCAACAAAACCAA
ATCTGTTTTGACTCCTTCGACGATTCTGACGACGTTTTCGTCCAAAGTAA
ATTCGGGAATGTCCCTAGCGAAATCAAGAATTGAGGTATATATTTATTTC
TTTATTGGGGAGTCCGGGGAGTCCTATGTATAAACCAAATGTTCAGATTT
GGTTAGAATTTAGTTTTTTATGAAGATATGGGGAATGGATTTGTTTGGTT
TAACAATGGCAGTGAAGACGATGAAGATGGCATAAACATCACCCGGTTAT
TCTCTTATTAGAACTTTAACATTTCGATTGTTTTCGCCATCGTCGCTTAA
ATAAAGAAAACTTTCCACTGAAAACTTTGAGTGGTGAGATTTCTAAGTTG
TCTGTACTTGTAAGTAGTGATTCTTATTGACGATTTCTTTTCCAGCCCAT
TTCGACTTCAAATGATAACACCACCTCTAATAAAGAGAACGTATCACCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028015-exon-sc0000661-1491911889:79097..79298 | TCONS_00028015-exon-sc0000661-1491911889:79097..79298 | Clytia hemisphaerica | exon |
| TCONS_00028015-exon-sc0000661-1510915933:79097..79298 | TCONS_00028015-exon-sc0000661-1510915933:79097..79298 | Clytia hemisphaerica | exon |
| TCONS_00028015-exon-sc0000661-1575043694:79097..79298 | TCONS_00028015-exon-sc0000661-1575043694:79097..79298 | Clytia hemisphaerica | exon |
| TCONS_00028015-exon-sc0000661-1491911889:79561..79781 | TCONS_00028015-exon-sc0000661-1491911889:79561..79781 | Clytia hemisphaerica | exon |
| TCONS_00028015-exon-sc0000661-1510915933:79561..79781 | TCONS_00028015-exon-sc0000661-1510915933:79561..79781 | Clytia hemisphaerica | exon |
| TCONS_00028015-exon-sc0000661-1575043694:79561..79781 | TCONS_00028015-exon-sc0000661-1575043694:79561..79781 | Clytia hemisphaerica | exon |
| TCONS_00028015-exon-sc0000661-1491911889:80092..80145 | TCONS_00028015-exon-sc0000661-1491911889:80092..80145 | Clytia hemisphaerica | exon |
| TCONS_00028015-exon-sc0000661-1510915933:80092..80145 | TCONS_00028015-exon-sc0000661-1510915933:80092..80145 | Clytia hemisphaerica | exon |
| TCONS_00028015-exon-sc0000661-1575043694:80092..80145 | TCONS_00028015-exon-sc0000661-1575043694:80092..80145 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000661 | supercontig | sc0000661:79097..80145 + |
Blast
The following BLAST results are available for this feature:
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