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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028124 ID=TCONS_00028124|Name=TCONS_00028124|organism=Clytia hemisphaerica|type=transcript|length=959bp
GGTGACGATGGTGTATCTATCTGTACACCAGCAACATGTTTTGTTATGAC
AGGAATGAGGATTGAGAGATAGTGGTTAAGACATATTGAAAACTATGTGT
CCATCCTATGGAATTCCGGCTGAATTGAGGGCAAATTAATGGTCTTTTCA
TGCTAATCACAAAGACCCAACAAAATTGGTATGTAGGAATATTTAATATG
TTTCATTAGTTTCACATCCTTTTTGAAGGTCATGCCAAGTTTTACATGTC
TTATTTTTGAACAGCTTTCGATTTCAAGGAAAGCTAGTTTCTCACTCTAG
ATTGAGTCATGTTTTAGTTTTAGAGgcaagtttcttctttttctctcttc
tgtCGATCAGGAAGGGACTTATATCCATTCTCGACACCTTGGGAACTAAT
TCTCAATTTCacttgagctagaatctgacaatttGCGAATTTCTATGTGT
TACAAAAAATTTGATACAgcctgaagacttcaaaaatggtcaaatttcgT
TGAAATATCGTACAATTGTTCCTTGGATGAACTCCTTgggatattttttt
cattttttgaaaattttgatttttcgagCCTGGAGACTAGACTAACTTTA
GGTCAGCCTGGAGACCTCAAAAGTGGTGCGCTTGGCTGAAATTAAGCACG
CTATTCCTTGGGTGATtattctttttacaaaaaatttagatttttgggtt
ttttttcctttgatgccttttttaattgaatATCAATTGTACGGggtatt
gattttgattttgactataagaagccAAAATCTATTAaattggagacatg
gcaatcctgctctatttgaagaaattgaaattatgccatgatttcttcgg
gagaCTGTTCTTCCTCtccgatttcttgtgtttacaatgaaatcacatcc
tttttcaaggccatgccaaggtttgcctaacttatttttaaattacctca
atttcaagt Run BLAST on NCBI transcript from alignment at sc0000665:3212..4304+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028124 ID=TCONS_00028124|Name=TCONS_00028124|organism=Clytia hemisphaerica|type=transcript|length=1093bp|location=Sequence derived from alignment at sc0000665:3212..4304+ (Clytia hemisphaerica)
GGTGACGATGGTGTATCTATCTGTACACCAGCAACATGTTTTGTTATGAC
AGGAATGAGGATTGAGAGATAGTGGTTAAGACATATTGAAAACTATGTGT
CCATCCTATGGAATTCCGGCTGAATTGAGGGCAAATTAATGGTCTTTTCA
TGCTAATCACAAAGACCCAACAAAATTGGTATGTAGGAATATTTAATATG
TTTCATTAGTTTCACATCCTTTTTGAAGGTCATGCCAAGTTTTACATGTC
TTATTTTTGAACAGCTTTCGATTTCAAGGAAAGCTAGTTTCTCACTCTAG
ATTGAGTCATGTTTTAGTTTTAGAGgcaagtttcttctttttctctcttc
tgtCGATCAGGAAGGGACTTATATCCATTCTCGACACCTTGGGAACTAAT
TCTCAATTTCacttgagctagaatctgacaatttGCGAATTTCTATGTGT
TACAAAAAATTTGATACAgcctgaagacttcaaaaatggtcaaatttcgT
TGAAATATCGTACAATTGTTCCTTGGATGAACTCCTTgggatattttttt
cattttttgaaaattttgatttttcgagCCTGGAGACTAGACTAACTTTA
GGTCAGCCTGGAGACCTCAAAAGTGGTGCGCTTGGCTGAAATTAAGCACG
CTATTCCTTGGGGCCTGGGAACTAATCTTTCGGTTTATGCTACCATTGGT
ATAGGCCTACAGCtgtaaataatttgaagattctgaagttgaacccagtg
cgttgcgcaccgGCTANGGCTGAAATTAAGCACGCTATTCCTTGGGTGAT
tattctttttacaaaaaatttagatttttgggttttttttcctttgatgc
cttttttaattgaatATCAATTGTACGGggtattgattttgattttgact
ataagaagccAAAATCTATTAaattggagacatggcaatcctgctctatt
tgaagaaattgaaattatgccatgatttcttcgggagaCTGTTCTTCCTC
tccgatttcttgtgtttacaatgaaatcacatcctttttcaaggccatgc
caaggtttgcctaacttatttttaaattacctcaatttcaagt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028124-exon-sc0000665-1491911889:3212..3845 | TCONS_00028124-exon-sc0000665-1491911889:3212..3845 | Clytia hemisphaerica | exon |
| TCONS_00028124-exon-sc0000665-1510915933:3212..3845 | TCONS_00028124-exon-sc0000665-1510915933:3212..3845 | Clytia hemisphaerica | exon |
| TCONS_00028124-exon-sc0000665-1575043694:3212..3845 | TCONS_00028124-exon-sc0000665-1575043694:3212..3845 | Clytia hemisphaerica | exon |
| TCONS_00028124-exon-sc0000665-1491911889:3980..4304 | TCONS_00028124-exon-sc0000665-1491911889:3980..4304 | Clytia hemisphaerica | exon |
| TCONS_00028124-exon-sc0000665-1510915933:3980..4304 | TCONS_00028124-exon-sc0000665-1510915933:3980..4304 | Clytia hemisphaerica | exon |
| TCONS_00028124-exon-sc0000665-1575043694:3980..4304 | TCONS_00028124-exon-sc0000665-1575043694:3980..4304 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000665 | supercontig | sc0000665:3212..4304 + |
Blast
The following BLAST results are available for this feature:
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