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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028143 ID=TCONS_00028143|Name=TCONS_00028143|organism=Clytia hemisphaerica|type=transcript|length=889bp
TAAAAGCTTTGGaaatgttttttcacacaaCTAACACTTTTAAAGTCTAG
ACTTTTCTATGAATTGAACATGAAGAAATTCTTAGCAAGTTCAgagaaac
aaatgaaaatacCTACCTCTGACAACAGTCAACAAAGTGTAGCAGATGTT
TTGGTTTCTTTTCTTGATTAATCATTGAGATGAAGTTGGTGATATCCAGA
CCAGATCCTGATGATCTCTTTCAAAATCAAAGGGTACATAAAGCATTTTC
TTGATGAATGAAatcttctttctttattttcgtTATTGATTAGATAGGGA
AAACATCAAAATCCTGAAAACTATATTCAATCCTTTCATGCATTTCACGT
ACCATAACTTTAACTCACTTTCTCTTTGTTCAtctctgttttaaatttct
tttagagttaaattctttgctttagaagaaaaaaaatcccaTTAAAATTC
CACTTCATGCATTTCAAAACAGCCTTTGACACGATCTGGCTATAGGTCTT
ATGGAAAATGCCGAGATCAATTGGAATCGATTACAAACAATAGTGTTGGC
ATACTAGGAATATACAAAATGTGCAGTCAGATAGTTGGAAAACGGACCAG
TTCGAACTGTTTGGTTTTCAGTCCAAACAGATAGAAAACTGGCCGGCTCT
AACTGAAAGGTTTGCAGTCCAGAAGGATGGAAAAGTGATCGGTTTTTGAG
CTGGATGGTTTGCAATCCAAATAGATGGAGAACTGACCGGTTTTGAACTG
GATGGTTTGCAGTCCAGAAGGATGGAAAATTGATTAATTATTGAACTGAG
GGGTTTGCAGTTCAAATAGATGGAGAACTGACCGGTTTGAACTGGATGTT
TGCAGTCCAGAAGGATGGAAAAGTGACTGGTTTTTGAAC Run BLAST on NCBI transcript from alignment at sc0000665:12868..13756 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028143 ID=TCONS_00028143|Name=TCONS_00028143|organism=Clytia hemisphaerica|type=transcript|length=889bp|location=Sequence derived from alignment at sc0000665:12868..13756 (Clytia hemisphaerica)
GTTCAAAAACCAGTCACTTTTCCATCCTTCTGGACTGCAAACATCCAGTT
CAAACCGGTCAGTTCTCCATCTATTTGAACTGCAAACCCCTCAGTTCAAT
AATTAATCAATTTTCCATCCTTCTGGACTGCAAACCATCCAGTTCAAAAC
CGGTCAGTTCTCCATCTATTTGGATTGCAAACCATCCAGCTCAAAAACCG
ATCACTTTTCCATCCTTCTGGACTGCAAACCTTTCAGTTAGAGCCGGCCA
GTTTTCTATCTGTTTGGACTGAAAACCAAACAGTTCGAACTGGTCCGTTT
TCCAACTATCTGACTGCACATTTTGTATATTCCTAGTATGCCAACACTAT
TGTTTGTAATCGATTCCAATTGATCTCGGCATTTTCCATAAGACCTATAG
CCAGATCGTGTCAAAGGCTGTTTTGAAATGCATGAAGTGGAATTTTAAtg
ggattttttttcttctaaagcaaagaatttaactctaaaagaaatttaaa
acagagaTGAACAAAGAGAAAGTGAGTTAAAGTTATGGTACGTGAAATGC
ATGAAAGGATTGAATATAGTTTTCAGGATTTTGATGTTTTCCCTATCTAA
TCAATAacgaaaataaagaaagaagatTTCATTCATCAAGAAAATGCTTT
ATGTACCCTTTGATTTTGAAAGAGATCATCAGGATCTGGTCTGGATATCA
CCAACTTCATCTCAATGATTAATCAAGAAAAGAAACCAAAACATCTGCTA
CACTTTGTTGACTGTTGTCAGAGGTAGgtattttcatttgtttctcTGAA
CTTGCTAAGAATTTCTTCATGTTCAATTCATAGAAAAGTCTAGACTTTAA
AAGTGTTAGttgtgtgaaaaaacatttCCAAAGCTTTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028143-exon-sc0000665-1491911889:12868..13756 | TCONS_00028143-exon-sc0000665-1491911889:12868..13756 | Clytia hemisphaerica | exon |
| TCONS_00028143-exon-sc0000665-1510915933:12868..13756 | TCONS_00028143-exon-sc0000665-1510915933:12868..13756 | Clytia hemisphaerica | exon |
| TCONS_00028143-exon-sc0000665-1575043694:12868..13756 | TCONS_00028143-exon-sc0000665-1575043694:12868..13756 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000665 | supercontig | sc0000665:12868..13756 . |
Blast
The following BLAST results are available for this feature:
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