|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028155 ID=TCONS_00028155|Name=TCONS_00028155|organism=Clytia hemisphaerica|type=transcript|length=903bp
AAGAGCATCCATCAAAAAATTACACTTCAAGACATCACTGAATGATACAT
GGGATTACAGTTTTTACCATCCAGCAACAGTGGGCGTGAAATATTCCATT
CGTGTCGAGCAAAAATATAAAGGCAATGGCTTATAccaattttcagtttt
gataAATGGAGAGAAAATTCACACAGTTGAGAACTCGATACCTCggcaat
tttacaaaattgatgtGCTGACGAAACGAAGTTTCAAGCTTCCTTGTAAC
GTTACTGTAAATAACTTTAAAATAACAAACTTTTTGTAATGTTGGCTATC
CTGGTATTCAAATCAAGGACAAAACTACGTATACTTAACCAGGGTGTACT
TGATTATCCCTAAATTTTTAAGggtgatgaaaaaaaattaggtatAAACT
ATGGACAATCTGGAGCAGCCCAATCTTGTAAAATCTAAGGTAAGTACAAT
CAAGGACAACTTTGGATAGAGTTTTCTCAATCAAGTACAATTCCGGTACA
TTCCAATTCATCCCTGATATCCAGGGATTTTCGCTACAACGTGTACTTTT
GTTTTGTTCTTGATTTGTCCAAAGGATAACCAAGGATTGTCCTTGATTTA
AATATTTGGTATCCCTACACCCATTGAAGTAAAAGACTGTATCCAAggca
aaaagaaaatgaaaccaAAAGTCATCGCAAAAGTTGAGTGCCGCTGTTTC
CACATAATATACAACGAGGACTCTCACAAATGCACAcacagaaaatgaaa
aactactTGATTCGATCAATAGACCTTTACATAAATTACTTTACGAACAT
CATTTGCCtccttttgaaattattgctatggtgattaactcccagcggat
tttattaaaactacttcctattcatagaAAATTTATTTGATGTATCGAGA
GAC Run BLAST on NCBI transcript from alignment at sc0000665:180976..181878 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028155 ID=TCONS_00028155|Name=TCONS_00028155|organism=Clytia hemisphaerica|type=transcript|length=903bp|location=Sequence derived from alignment at sc0000665:180976..181878 (Clytia hemisphaerica)
GTCTCTCGATACATCAAATAAATTTtctatgaataggaagtagttttaat
aaaatccgctgggagttaatcaccatagcaataatttcaaaaggaGGCAA
ATGATGTTCGTAAAGTAATTTATGTAAAGGTCTATTGATCGAATCAagta
gtttttcattttctgtgTGTGCATTTGTGAGAGTCCTCGTTGTATATTAT
GTGGAAACAGCGGCACTCAACTTTTGCGATGACTTTtggtttcattttct
ttttgccTTGGATACAGTCTTTTACTTCAATGGGTGTAGGGATACCAAAT
ATTTAAATCAAGGACAATCCTTGGTTATCCTTTGGACAAATCAAGAACAA
AACAAAAGTACACGTTGTAGCGAAAATCCCTGGATATCAGGGATGAATTG
GAATGTACCGGAATTGTACTTGATTGAGAAAACTCTATCCAAAGTTGTCC
TTGATTGTACTTACCTTAGATTTTACAAGATTGGGCTGCTCCAGATTGTC
CATAGTTTatacctaattttttttcatcaccCTTAAAAATTTAGGGATAA
TCAAGTACACCCTGGTTAAGTATACGTAGTTTTGTCCTTGATTTGAATAC
CAGGATAGCCAACATTACAAAAAGTTTGTTATTTTAAAGTTATTTACAGT
AACGTTACAAGGAAGCTTGAAACTTCGTTTCGTCAGCacatcaattttgt
aaaattgccGAGGTATCGAGTTCTCAACTGTGTGAATTTTCTCTCCATTt
atcaaaactgaaaattggTATAAGCCATTGCCTTTATATTTTTGCTCGAC
ACGAATGGAATATTTCACGCCCACTGTTGCTGGATGGTAAAAACTGTAAT
CCCATGTATCATTCAGTGATGTCTTGAAGTGTAATTTTTTGATGGATGCT
CTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028155-exon-sc0000665-1491911889:180976..181878 | TCONS_00028155-exon-sc0000665-1491911889:180976..181878 | Clytia hemisphaerica | exon |
| TCONS_00028155-exon-sc0000665-1510915933:180976..181878 | TCONS_00028155-exon-sc0000665-1510915933:180976..181878 | Clytia hemisphaerica | exon |
| TCONS_00028155-exon-sc0000665-1575043694:180976..181878 | TCONS_00028155-exon-sc0000665-1575043694:180976..181878 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000665 | supercontig | sc0000665:180976..181878 . |
Blast
The following BLAST results are available for this feature:
|
