TCONS_00028157 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00028157
Unique Name	TCONS_00028157
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	712

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000667:2280..16454+
coding sequence from alignment at sc0000667:2280..16454+

transcript sequence

>TCONS_00028157 ID=TCONS_00028157|Name=TCONS_00028157|organism=Clytia hemisphaerica|type=transcript|length=712bp
GTTTATTTTGACTACAAACACAAATCAGATTGTATTTCATTGTTTACACA
CTGTATATTTTATTGATCGCTTTTTAGTAAATAAGAAAATGTCATTGTTA
GCAACTTCCTATCGTTATGAAATCGACGGAAGTAAACGAAAATCTTTACA
AAAGGCTCTGGCAAGAGAAGAGTCAAGAATCAAGGAAGATGAAATGTATG
CAGAGCAAACACGAAGACTTGAATCgaATCAGATGGTAAATGAAGTCAGC
AAATGGACTGAAAATTTGGAGGAgGCTAGTGGTAGACGTCGTGTGAAAAT
GGAAAAGGCtcttatcaaagaagaaattagGTTGGGTAGCAAAGCTTCCA
TTATGGTACGGAAGGCTCAATTGAAGCAACTTCTTACGACAGAACACGCC
AAGTATGAAGAAGAGCTGAACAAACTTGGTCTTGCTTTTTATCAAGAAAG
ATTATGATCCCCATTCCGCTTGTACTTGTATTATAGTGTCACTAGGCTAA
TTATTAATTTATAGTTTGTTATtaattgtttttgataattaaaatttgat
ttttttattttcaaagtttagcaaatgtttttgtttgggTACAGTATGGC
TTCAGAGCTGTTAttttgaatatatatttttttaactttatgaaatattt
taattgaaaatgaattgtaaaatttgcaaaaattgaaCATGTCGTtgctt
tttgtgtttttt

Run BLAST on NCBI

protein sequence of TCONS_00028157-protein

>TCONS_00028157-protein ID=TCONS_00028157-protein|Name=TCONS_00028157-protein|organism=Clytia hemisphaerica|type=polypeptide|length=151bp
FILTTNTNQIVFHCLHTVYFIDRFLVNKKMSLLATSYRYEIDGSKRKSLQ
KALAREESRIKEDEMYAEQTRRLESNQMVNEVSKWTENLEEASGRRRVKM
EKALIKEEIRLGSKASIMVRKAQLKQLLTTEHAKYEEELNKLGLAFYQER
L

Run BLAST on NCBI

transcript from alignment at sc0000667:2280..16454+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00028157 ID=TCONS_00028157|Name=TCONS_00028157|organism=Clytia hemisphaerica|type=transcript|length=14175bp|location=Sequence derived from alignment at sc0000667:2280..16454+ (Clytia hemisphaerica)
GTTTATTTTGACTACAAACACAAATCAGATTGTATTTCATTGTTTACACA
CTGTATATTTTATTGATCGCTTTTTAGTAAATAAGAAAATGTCATTGTTA
GCAACTTCCTATCGTTATGAAATCGACGGAAGTAAACGAAAATCTTTACA
AAAGGCTCTGGCAAGAGAAGAGTCAAGAATCAAGGTTAGTGAAAATAAAG
TGTATGAAGTTCTTTCAAATTGATATCCATGTTCCCTTTCAACCCTTAAA
AATAATAAGACTTTTCGTAACGTTCCTAGCTTTGTAAAATTTTAAACCAA
TAGcatatagaaatatttttttagaaaaatgaattGTGTTAAAAAGTTGA
CAGATTTGGATGAAAAGGTTTGATATTTCACTTATGAAAAGTTTGACATG
ATTTCTCTCGTTCTTTGTAAAGGAAGATGAAATGTATGCAGAGCAAACAC
GAAGACTTGAATCGTAAGTCTTATAAATTCTTAATGCATTTGAAATATCA
TATCTTCCCAAACAGTGGTCTACCCAGTTTCTACTCAGTTTATCCATTAT
TTTCTGTATACCTCAAATTTTTTACTGATGAAAATGATTATTCCCAATCT
GCTTATATATAATCtaagaatttgtttttttaggaATCAGATGGTAAATG
AAGTCAGCAAATGGACTGAAAATTTGGAGGAggtaaattttcatttaaat
gGGTTTTTTGCACCCCTTTTTTTGTCAGTGGTAATAAAGTGCGATTTTAT
ATGCTTCTTATGTATTTTTTAGTgagtattatttttttcaaatacagacg
aaattttcacttttaagtTAGCCCAGGGTCCACTTGGAAATAAGGgattc
aaaatctgttattgatgtttgttctCATTTCTAATTATATTTTTGGTCAG
CCCcgatgacccttcaaatcccttttTTCCAGCCGCCGCAACTTAAgagt
ttggtttttttattccgatttTTCCGATTTTACTTTCGGTTTCTTGTGTC
TTAATATTCGGAAAACCGGGACTTTAATGGCGTTCGCTGCGCGATTTCTT
GCATCAGCCATTACCTCCCTAATAACGCGCCACCTATTCTTTTAAGCGTT
TCTTTCGGTTTCTTgggaaaatgttaaaattagCTAAGCAATAATAGGCC
AGTTTAGTTCGTGTAAATTCTAAATCGTGGCTGGTTGACTTTTGGACGAC
AGAAGTAGTTCATATTCACAAGGGTGAGAGTTTTTTGTTTCTGCTTCGTT
TCAAAGTGTATTACAAATCTGGCAAGTATCATTACTTGTATTCCAAAATA
GATAGCAGCAAGTGTAAACACTGGTAAAAAGTCTGCCTCACTTGAAAGTT
ATCATAAAAGATAGCAGCAAGTGTAAACACTGGTAAAAAGTTTACCTCAC
TTGCAAGTTATCATTAAAAGATAGCATAAGCTTGTCTGTGTTATATATCA
GACAAGCAGCTACACCCAGAGGTTGCATGCGAACTCCTTGCATCCTCTTG
CTAAGCTTACTTAACCTACTTAACCTACTTAACCTGCTTAACCTATCAAA
CCTATATAACCTGCAAAATTTGCACAAACTACAATATTGTCttacttatt
ttgaaaatatgtcgTCAAACATGCCAACGTATCAAGTTTCGAAAGCTGTC
TTAGGTTCATTTAATCAAGCTGACGAAAACTTATTCGGTCAAACAGCTGG
GACACAATGTAGCGTTAATTGCCTTTATGCTATATTTTGGTCACATTTCC
GTCGTGTTTCTATTTGGAAGACAACAGACCTTGACAAAATTTTAATCGAA
GGAGACAAGTTGTACAAACAATTAAATACAAATCGTCATCTTTCTGTCGA
TGATATGCCACGCTTCATTGAAATAAATGGTAACGTAACtgatattaatt
ttttgaattttactaATGGTGAAGCTAAGTTGATTGATGATTATCCTCTA
CTTCAAATCCCTCTGAGTGAATGTGAAAATCTAGAAGAATTCAATGCATT
AATGATTATTAATGGTTTTACTATTGCAATTATGAGTCGGCTTCAAGAAT
ATTTTGTCTTTGACTCGCATAGTCGAAACGAATTTGGTCTGCTTGACCCG
TCAAATGGAAAGTCCTGTCTATTAaaatttgataacatttttgaacttga
aaaatatattcaatatttttatttacaagaaatGGACAAAAAGAGTGCCT
ACTTTGATATCCAATTTATTCAAATCTGTGAACCAAAAGAAGAGCTTAAA
AACATACTCCAACGAGActtttcagcatttttaagATATTGTACAAATAA
GCGAAAAAATAATTgcgatgatgaaaatgatactGCTAAGCGTCAAAGAA
GATGtcaagaaaacagaaaatattatgagaaaaacaaagaagtgcttatc
aaaaatcaaaaaatctatgattcccaaaacaaagagaaagttaagcaaaa
aaataaaaattttagatcCCAAAACAAGGAGAAAGTTcatcaaaaagata
aaaattatagatccaaaaacaaagagaaagttcgtcaaaaagataaaaat
tataGTTCCCAAAACAAGgagaaaatcaatgaaaaagataGAACCTAcca
taaaaataacaaagataAAGTagctggaagaaaaaaaaaaactacaagaa
aaataaaacccaaaaaaatgatgatcttgtgaaaaaatttaaaaatctta
tttACGAAGGTCCTTTTTATGTATGTGTTTGTTGCAACAGATGTCTCTAT
CGACAAACGGTGATTAAGTATTTACCTGAAAAGTATGATATGCCAGAAGA
AGATTTTTGTTCAGAGGTTGCTTCATTTGATGGCAAATTGTACATTTGTA
AAACATGTCAtaacaaactcaaaaaaaataatttaccatgccaatctgtc
aaaaataaactTAGCCTTGATGAATTACCTGCCGAATTTCACACTCTTCG
CAgacttgaaaaagttttaatttctcgcagaattttatttaaaaaaatag
caNAGCCTTGATGAATTACCTGCTGAATTTCACACTCTTCACAgacttga
aaaagttttaatttctcgcagaattttatttaaaaaaatagcaATTATGC
CGAAAGGTCAGTTCCCCAAACTTAAAGGTTCAATTTGTAATGTACCCATT
GATGTTGAAGATGTTGCCAATACTTTGCCAAGAAAAACAAGTGATAACGG
TTTAGTCATTGTTAAACTTAAAAGAAAACTGGAATATAGAGGACACGTAA
TTTTTGAGTCTATTAGGCCTGATTTCATCCAGCACATATTGAGTTATTTG
AAAGTGAACAATCCTCTTTATCAAGACATTGAAATTGATGTCAGCAATAT
TTCTAATGATGAGACCATGATACAAAATAATACAGATGTTGACGAGGAAA
CAAATTCTAATGGAAAGGACCATTGTGATGAAAATATTTCTGATAATGAA
CTTGAAGGAACGCAAAATAATACTTCAGTCACAGAGGAACTAGAAACCAC
AGTTAACCCACTTGATGTTCACCGTTCAAGTGCAAATGAAACAACTCTTA
TGCCTCACACTCCTACCAATGCAGAAGTAGATAACGAGATTTTAACATTA
GCACCTGGTCAAGGTAAAAAACCTGTTTCAATCTTGAATgatgaaaattg
tgaaatgCTTGCTCATCCCCATTTATTTCCCAAAGGTAGATTTGGTTACA
GAGTTGAACGCAATGTAAAACTAAGTCCGTCTAAGTACTTTAACCAGCGT
TTGTTGAACTATACACAAAAGTTTGCTTCTGACTCCGACTACatattttt
tgctaattttgtaACACAACAAGTCTCTTtaacaaatcaaataaatattG
CAATGAAAAAAGTTTCCGCCTCTAATGTAACTGCCGGTATGTTAAGtcag
aatttcaaagaaacagtCAAACAATTCATTGCAAATGACAAGGCATTTGC
CTTTATGAGTACTGTCAAAGGAACTCCTGcatattggaaaaaatttcagc
aAGAAGTTTTGGCAATGGTTAAACAATTAGGACCACcaactttctttttt
actttaagCTGTGCCGACCTTAGATGGAATGAATTGATCTCTATAATTTA
CAAGCTCAAGGGTGAAAACCATACTGATGAATTCATTGAGAATCTTTCTT
ATCATGAAAGATGTGATTTGTTAAATAGTAATCCTGTACTTGTTGCTAGA
CATTTTCAATACAGAGTTGAGGTATTTTTTAAAACTATTGTTTTGGATGG
TCCGCTTGGCAAAACAACTTATTATGCTATCCGTGTTGAATTTCAAGTCC
GTGGGAGCCCTCATATTCATTCTTTCCTTTGGATTTTAAATGCACCAATA
TTGTCTACAGAAACCAAAACTGAATACATANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTACGAAGGTCCTTTTTATGTATGTGTTTGTTGCAACAGATGTC
TCTATCGACAAACGGTGATTAAGTATTTACCTGAAAAGTATGATATGCCA
GAAGAAGATTTTTGTTCAGAGGTTGTTTCATTTGATGGCAAATTGTACAT
TTGTAAAACATGTCAtaacaaactcaaaaaaaataatttaccatgccaat
ctgtcaaaaataaactTAGCCTTGATGAATTACCTGCTGAATTTCACACT
CTTCACAgacttgaaaaagttttaatttctcgcagaattttatttaaaaa
aatagcaATTATGCCGAAAGGTCAGTTCCCCAAACTTAAAGGTTCAATTT
GTAATGTACCCATTGATGTTGAAGATGTTGCCAATACTTTACCAAGAAAA
ACAAGTGATAACGGTTTAGTCATTGTTAAACTTAAAAGAAAACTGGAATA
TAGAGGACACGTAATTTTTGAGTCTATTAGGCCTGATTTCATCCAGCACA
TATTGAGTTATTTGAAAGTGAACAATCCTCTTTATCAAGACATTGAAATT
GATGTCAGCAATATTTCTAATGATGAGACCATGATACAAAATAATACAGA
TGTTGACGAGGAAACAAATTCTAATGGAAAGGACCATTGTGATGAAAATA
TTTCTGATAATGAACTTGAAGGAACGCAAAATAATACTTCAGTCACAGAG
GAACTAGAAACCACAGTTAACCCACTTGATGTTCACCGTTCAAGTGCAAA
TGAAACAACTCTTATGCCTCACACTCCTACCAATGCAGAAGTAGATAACG
AGATTTTAACATTAGCACCTGGTCAAGGTAAAAAACCTGTTTCAATCTTG
AATgatgaaaattgtgaaatgCTTGCTCATCCCCATTTATTTCCCAAAGG
TAGATTTGGTTACAGAGTTGAACGCAATGTAAAACTAAGTCCGTCTAAGT
ACTTTAACCAGCGTTTGTTGAACTATACACAAAAGTTTGCTTCTGACTCC
GACTACatattttttgctaattttgtaACACAACAAGTCTCTTtaacaaa
tcaaataaatattGCAATGAAAAAAGTTTCCGCCTCTAATGTAACTGCCG
GTATGTTAAGtcagaatttcaaagaaacagtCAAACAATTCATTGCAAAT
GACAAGGCATTTGCCTTTATGAGTACTGTCAAAGGAACTCCTGcatattg
gaaaaaatttcagcaAGAAGTTTTGGCAATGGTTAAACAATTAGGACCAC
caactttcttttttactttaagCTGTGCCGACCTTAGATGGAATGAATTG
ATCTCTATAATTTACAAGCTCAAGGGTGAAAACCATACTGATGAATTCAT
TGAGAATCTTTCTTATCATGAAAGATGTGATTTGTTAAATAGTAATCCTG
TACTTGTTGCTAGACATTTTCAATACAGAGTTGAGGTATTTTTTAAAACT
ATTGTTTTGGATGGTCCGCTTGGCAAAACAACTTATTATGCTATCCGTGT
TGAATTTCAAGTCCGTGGGAGCCCTCATATTCATTCTTTCCTTTGGATTT
TAAATGCACCAATATTGTCTACAGAAACCAAAACTGAATACATAGAGTTT
ATTGATAAAATAATCAAAGTTCACTTACCATCTCAGGAAGAAGATCCTGA
CTTGTtcaaacttgtaaaaacttATCAATTGCATCGTCATTCAAAAACAT
gtcgaaaatataaaaatacgccgtgcagatttttttttggtaaattcTTT
TCTGAGAAAACAATAGTTTCTGAGCCCTTGCCACAAGAACTACCACACGA
GGAAAAAGAAACCATACTTTCACTGCGAAAGGAAGTCTTGTCTAAAGTAA
GGACTTATATTAACGACAACCTTAATCCggctaaaagaaattttttcaac
cCAGATGCAGAAAATTATAACCCAGTTCCTACCATAGACGAAGTCCTTGT
TGAATTAGAAATtccaaaaactgattatgaatATGCTCTTTCTGTgtctg
atgatgatgattttcacATTTATTTAAAGCGCGATACAAATGCATGTTTT
GTAAACAACTACTTTACTGAAGGACTCAAAGCATGGCAGGCAAATCTAGA
TATTCAGCCAGTGTTTAATTATTACAAAGCTGCAACTTATATGTGTGCAT
ATCTTTCTAAAAGTGAAGATGAAGTGTCTCATGCCATGACTCAAGCTGTT
CAAGACGCCTTTGAAAACGGTGGTGATAAGTATGAGCAAATGAAATCTGT
TGCGCACGCATATGTTTCAAAGCGAGAAGTATCTGTGCAAGAAGCAGTTT
ACCTTAGTATGCCACAGTTATGGCTTCGAAAACTTTACCCTGGTGTAACT
TTTGCAAATACAAATGTTCCAGAAAAAAGATTCAGAATGTGTCTTAGTGA
AGATGAAATTAGCGAGCTACCTGAGGATAGTActtcaatcttcaaaaaaa
atatgctAGATAGGTATTGTGATAGACCAAAAGATACAAACGGAATTTAT
AAACCAGTTGCTGAAATGTGTTATGCAGAATTTTTGAGGTTTTACAGTGT
TGTTTACAATGAATGTGATGAAAATGATTGTCAACCTAATGAACTGGAAG
ATGATTTTATAGAATCAAATCATCCCTCAAATGAATACCCAAAGATTGTT
AAACTCCGCTCAATGAAAGATAAATTAAAATGTCGCAAAGTTCCACTTGT
CCTTCGCCTTCACCAACCTAATAGGAATAAACAACCAGAGGATTATGCAC
GTCATctcttgatgttgtacttgccGTTCCACGATGAAAACGAATTACTN
ATGAGCTTCAAAATAGAAATCTGAACAATAACGATGAATCAGATGATGAA
AATAATGATGACACTGCTCATGTTAGAGCTGCAATTCCAATTGAATCTAT
TTTGCTCCCAGATAATGAAATAAATGCACGTATAAGATCATTAAATCATC
AACAAAGAGAAGTTTTTGATGTAATTCACAAATGGGGAAgagatttcata
aaaaacatgtCTACTAAGTGTCCTAAAAATAAAGAACCATTCCACATTTT
CCTAACCGGTGGCGGAGGCGTGGGAAAAAGCCATTTACTCACTACCATCT
ATCATTCTTTGTCAAAACTTCTAATGTACAGAGGAGGAGAACCAACTAAG
GAAAGAATTCTAGTACTTGCACCGACTGGTGTAGCAGCTATCAATGTGAA
TGGGACCACTATACATACAGGCTTGATTATCCCAACAACTGATTTCTTTC
CACTTAATGCTTCATCCAAATCAAACTTGCAAAAGAAGCTTTCATGTGTT
GAAATTATCATGATAGATGAAGTAAGTATGGTGCCCAGTCGTTTATTCAG
AAATATTGACGAAAGATTgcgaaaaatatttgatgttgATAAGCCTTTTG
GTGGAAAATCAGTCCTGCTGTGTGGTGATTTATATCAACTACCGCCAATT
TTTAGAGATCTTATTTACAAACCAGATTGTTCAACAGTCCATGGCATAAT
TGCATTTGAATTGTGGCGAAGCTTCCAAATGGCAGAACTAACTGAAGTTA
TGAGACAAAGAGATGATATAGATTTCATAGACCTCTTAAACCAAATCCGT
GTAGGTGAACTAGATGAAGAGAAAGAAGAGCTTTTAAAATCCAGATTCAT
TGCTAAGGATAGTCCAGATTTTCCCTCAGATACAACTCATATTTATGCTG
AAAATAAACCAGTTGATGCATATAATATGCAAAAACTTAATGAATTATCA
ACTGAAAAGCATTTGATTGTTGCACAAGATGAAATTCCAAAACATTTGAC
TAGtaaagatttgaaatttattgaaaatgctAAGGCAAGAGAATCGGGTG
GTTTGGCCCGCATACTTGAAATGAAAATAGGTGCTCGCATTTTAATCTCC
AAAAACATTGACATTACAGATAGATTGGTCAACGGTCAAGTCGGTCAAGT
TATGGGATTTAAGTTTGATTCCAATAATAAGATATCAGGTATCTATGTTA
AACTTGATGATGTCACAGCAGGCAAAAATGGATCCAATTTAGATCACGTA
TGTAGAGAAAACAATTGGACTTTGATTGAAAGGGCAGAATCTACCTTTAA
CACCAGAAagggaaaaaagaaaagcaaaaaggaAAAACCTTTCATGGTTC
GGAGAACTCAATTCCCTCTGGTATTGTCCTATGCATGCACAAGTCATAAA
GTCCAAGGACTAACACTGCAATCAGCGGTAgtaagttttgatttatttgc
aCAAAGATCTTTTAATGAAGGCCAAATGTACGTAAGTTTATCCAGAGTGA
CAGACATAAATGGATTGTTCCTAATAGGTGAATACAATAGAAAAGCTATC
CGTGCTAACAGTGAAGCAGGAATTGAGTATGAACGATTACGAGAAAATAG
TCCTTTGCATAAAGTGGAATATTTTTCACCTGCTTTGGCTTCCTTCAACC
ATTTAAATATTTCAGTTCTCAATATCCGCTCTTTGAAGAAACATGTGATT
GACTTAACTAAATCTGAAAGTCTAATGAGCAGTGACTTGTTATGCCTTAC
TGAAACTCAACTATCACCTTCAAGTGAAACTACTGACATTGATCAAACAc
tgggaaatttcaaaattgaatacAACAACAATTCGATTAATAGATTTCAA
AACACTGCATGTTGTTCAAATTCCTCAATTGAGATTTTAGACTGCCTTAA
AGCATGTggttaaagtttttaaaagagaCATTTAGCAACCAACCAATCTC
CCTCTTGCTTTTGTACAAATCTCCTGATtatccaaaaaatacttttcgtG
AAGAATTGTTGCAACTTTTATATGATGATATAGACATTATTGTGGGAGAT
TTCAACATTGATGCATTAGATCCTGAAAACGCATATCTGGGTGAAGTACT
TTCTTCATATGAAATGGTAGTGAATGAACCAACTCATTTAGCAGGTGGTC
TTCTTGACCATGTTTATTTAAAGGATAACTTCATGGATAGAAAAGAAGTC
AAGTGTTTTGTAAaggatatttatttttctgacCACGATGGAGTTTGTTT
CACCATATCAAACAACACTTAGTTTTTAAAACCTGTTTAAACCTAGTTAA
CCTACTTAGCCGATATGATCTACTTAACCGACTTGACCTATTTGAATGAC
TTGagaaatacttttttatatGGGGATATGGGGTGGGGGTGGGGTGAAGG
AGTTGCAAAACTCTAGAGCagttaaaatgatttttgataaacTGTAATAT
TTAATAAAGCGTGTACATTGCTGCTGAGATTTGCAACTCCTTCTTACACA
ACCATGTGTATATAAACTTTCATTTGTTGAAATATAGAGGAAGCTTCAAG
GCAGCTCATTGATTTTCATTAATAGAGTTTTTCAAATTAAGTTTATTTCA
ACGCTGAAATGCTACATGTATATACATAGTTGTATTGCTTGGGGATCTAA
TTCAATATGGCTAGTATAAGAATTTTGTCCCTTATGTCAAATATGTTTGT
TATCGATTTTTTTAGTTATAACTTTTTCAAGTCACTCTATTTAAATAAGC
TGAGCTTTAGTCAGATATTGTTGTGAATCACTAAAAATTTTATCTTCCTG
TGGTGTGTTGCCAGTGTTGATCTTGTCACGAAGACTCTGAATGTCTGTGA
TCAAAATATAATATCATTGAAAAAAGGGACTTTCCTCACTAGCCATACCT
TTTCTGATTATTTTACATAAAATTTGGATTACTTTATACTATTTTTGTAC
TTTGCATTTTAACAAATTAATCATTATGTAGTTTTATACAAAAGTTTGAA
ttacttttttacaaaaattttaattacttttatacaaaaatttgaattgt
ttttatacaaaaatttgaattggttttatacaaaaatttgatacagaatt
ttgaattatttttatacttCACATTTTATAAAATCAtcttttgtaattat
ttttttcggTAACATGGTTTCTTATACATAAATTACTTATAgtttatatt
ttctatttttttgcataTAAACCTcgattttataaatcaaaactatataa
aatttacaaaaaatgaacATTCAAATGTATTATCTATTGAGAAAAATAAT
GGACAAAATGTATATATGAATGAATTTGGTGTTAAGTTAAAAATGTTGGT
AATTTGTTGATTGCTTATTGTTATTTTAGTATCTGGTGATTCATGTTTGT
AGTGTTGAAAAAGTCCATGGCTATGCATCGTTTCAGCTTGGTATACCGTC
ACGTTCCTGTATTTGATGTTGTTTGGTAACATATTCATATATATGATAAT
GATATATACTCAATCATTTCACTCATCATGGCTAAATACTTATAAACCAT
CGGTTCGTTTTTGGACACCTAAATACTGTAAAGAGTTCATAAAAGTGATA
GGTAAGTTAAAGGTCTCTTTTTGATCCATTAAAATAGGTTAACGCTAACA
CTTTCACGTGCATTTCTAGGTATATTTTACAAAGCAATCTTTTTGCATTA
CAAAATTAATCGTTAATAATCTAAGTTTTATAAAGTGAAATGATTACGTT
ACTATTATTATTTACCTGTGTATGGgactttaatattttcattgttttgt
taCAGATATGCTATGCAGAGATCAATTAATAACCAAATATCATAATTCTT
TATCAACGACGAGAAAATTGGTTCCCTCTAACACCATCCAATAGTTTGAA
TGTCGACACTACAAAAATCGAAACAAGGTACTATAAGCCTCTTATATGGC
CTACATTAAAAGTTTGCATAGTGGCCAATTGATATTTTGATGAATGTCGA
AAAAGTGAGATCAATCAATATCTATCATATATATCAATAGATTCTACCCT
GTTTTCAATTTGgagaaaatattataaaaaatatcttataattttctctt
ttctacAGGAATTCAATCGTCGACAATCAATTTACAAAGTTTCTACGCCA
CTATATGCTGGTATGATTGAAGATACACACGTTAACGTATCCTAAGCACT
CTATATCACGTTTAAAGATTAAATGACGATgtatttttcaaaggtttttc
gTCTTAACTATTCGTTATTGGAGTATTATGCTGTAATGTTTTTTTGGTTC
ATTATACTGCTTCTTCTATACCTGCTTCTAATTCAATTTGTCGAAATACT
GCTCCTGGAATTAAAGAAATTTGGTTTGGACAATAATGATGGACTTTACT
TCAACTAGAgagtattttaaatttttaatgtCTTGCAAATAAGGAATGTA
CAATAGTATTTGTGTCAATATTTACAAACAACTAcatgaatatCTAAAAC
AAcgttattcaaaattttgatatgttaattttgttatgtttttcaAGCCT
TGTTAATCGACCCTGATAAAATGTTGATGATCttggcacccattttgcct
aagccACCTCTAAGAGTAGTTTATCGTTATCTTGTGCTCACATTGTTTCT
GCTACACTCTAATCTTTTGATCCAGCTTATCCTTTGATCTATCTTATTCT
ttcgggctgaccttccagcgcagctggtttattcaactttgattgagtag
cttttttggacctaccccggtggggtagaggtcctataaattaaccgatg
tccgttcgttcgtccgttcgtctgttccttcgtccgtccgtctgttacca
gcttttctcaggattggctcattatttttttctgatttttggcacaatga
tgcaaaatggcaatgcccaaaatgtgacggagcccgattttggagaaaaa
aattttttccggccgaaaatgccggaaatatgccggaaaaacaggttttt
gggcattttctcgagattttatcattagttttttctgattttttgctcaa
agatgcgtattaacaatgcccaaaacatggccgagtccgatttttgataa
aaaaatttttccggccgaaaataccggaaatattccggaaaaactgttta
tttggcattttcttgagattttatcattagttttttctgattttttgctc
aaagatgcctaataacaatgcccaaaacatggccgagtccgatttttgag
aaaaaaaattttccggccgaaaatgccggaaatatgccggaaaaactgtt
ttttggcattttctcgaaattttatcatcagtttttgctgattttttgct
caaagatgcctaataacaatgcccaaaacatggccgagtccgatttttga
gaaaaaaaattttccggccgaaaatgccggaaatatgccggaaaaactgt
tttttggcattttctcgaaattttatcattagtttttgctgattttttgc
tcaaagatgcgtattaacaatgcccaaatcattgccgagtccgatttttg
agaaaaaaatttttccggccgaaaatgccggaaatatgctggaaatcgcc
gtttttgcagatttgaattgggctcttttccatatatttctttgtttttt
cacttaaaaaaattattgataacaatgccaccatcaagcatgattcaatt
gtcaataaaactttagcaattttgcaaccggaactttctatttctttttc
ccCTAAACCCCttcccccccatcaacaatcaatgatgacatttaatgcat
tttcgctaagcgctatattttcttaatgattgtttttctccctagtgcta
tctaagtttcatcatcaggtaggtccattcagcatgttgcttgttgttat
ttggatttcaaatattctttttccaaaatggcgacctcgtcaaatgctcc
tagtctacttcactggactctgGACTGgagcgtcataaaaaaaattatca
aaaagcaaagttaagccagaagtagactctagtctacttTTAAGTAGGCT
ATGTGcaagttcaattttttttcattattttcaaaacacagGCTAGTGGT
AGACGTCGTGTGAAAATGGAAAAGGCtcttatcaaagaagaaattagGTT
GGGTAGCAAAGCTTCCATTATGGTAAGTCATTTCTTCCATTTTCCATTCC
TGTAGGTAGGTATCTTTTTCATCCAGGATAAAAATTTGGTTGACTCTAGG
AATTTAAACCACCTTTCCTTGAcctaatgggctcttccagaaaaatgtcc
gggggtcaaaagtcacaattaTTATATCCTCTATCCCATCCTGCATAGTC
TTCTCAAGAAATTATTCACCTACTCCCGATTTTCTTCCCAAAACAGGAGC
GTACGAATTTTTTATTCTCCTTTCGGTGTTTTATTTGATCTTCTTATTTA
GAATTTCCAATGTTTCAGGTACGGAAGGCTCAATTGAAGCAACTTCTTAC
GACAGAACACGCCAAGTATGAAGAAGAGCTGAACAAACTTGGTCTTGCTT
TTTATCAAGAAAGATTATGATCCCCATTCCGCTTGTACTTGTATTATAGT
GTCACTAGGCTAATTATTAATTTATAGTTTGTTATtaattgtttttgata
attaaaatttgatttttttattttcaaagtttagcaaatgtttttgtttg
ggTACAGTATGGCTTCAGAGCTGTTAttttgaatatatatttttttaact
ttatgaaatattttaattgaaaatgaattgtaaaatttgcaaaaattgaa
CATGTCGTtgctttttgtgtttttt

Coding sequence (CDS) from alignment at sc0000667:2280..16454+

>TCONS_00028157 ID=TCONS_00028157|Name=TCONS_00028157|organism=Clytia hemisphaerica|type=CDS|length=2280bp|location=Sequence derived from alignment at sc0000667:2280..16454+ (Clytia hemisphaerica)
TTTATTTTGACTACAAACACAAATCAGATTGTATTTCATTGTTTACACAC
TGTATATTTTATTGATCGCTTTTTAGTAAATAAGAAAATGTCATTGTTAG
CAACTTCCTATCGTTATGAAATCGACGGAAGTAAACGAAAATCTTTACAA
AAGGCTCTGGCAAGAGAAGAGTCAAGAATCAAGGAAGATGAAATGTATGC
AGAGCAAACACGAAGACTTGAATCgaATCAGATGGTAAATGAAGTCAGCA
AATGGACTGAAAATTTGGAGGAgGCTAGTGGTAGACGTCGTGTGAAAATG
GAAAAGGCtcttatcaaagaagaaattagGTTGGGTAGCAAAGCTTCCAT
TATGGTACGGAAGGCTCAATTGAAGCAACTTCTTACGACAGAACACGCCA
AGTATGAAGAAGAGCTGAACAAACTTGGTCTTGCTTTTTATCAAGAAAGA
TTATGATTTATTTTGACTACAAACACAAATCAGATTGTATTTCATTGTTT
ACACACTGTATATTTTATTGATCGCTTTTTAGTAAATAAGAAAATGTCAT
TGTTAGCAACTTCCTATCGTTATGAAATCGACGGAAGTAAACGAAAATCT
TTACAAAAGGCTCTGGCAAGAGAAGAGTCAAGAATCAAGGAAGATGAAAT
GTATGCAGAGCAAACACGAAGACTTGAATCgaATCAGATGGTAAATGAAG
TCAGCAAATGGACTGAAAATTTGGAGGAgGCTAGTGGTAGACGTCGTGTG
AAAATGGAAAAGGCtcttatcaaagaagaaattagGTTGGGTAGCAAAGC
TTCCATTATGGTACGGAAGGCTCAATTGAAGCAACTTCTTACGACAGAAC
ACGCCAAGTATGAAGAAGAGCTGAACAAACTTGGTCTTGCTTTTTATCAA
GAAAGATTATGATTTATTTTGACTACAAACACAAATCAGATTGTATTTCA
TTGTTTACACACTGTATATTTTATTGATCGCTTTTTAGTAAATAAGAAAA
TGTCATTGTTAGCAACTTCCTATCGTTATGAAATCGACGGAAGTAAACGA
AAATCTTTACAAAAGGCTCTGGCAAGAGAAGAGTCAAGAATCAAGGAAGA
TGAAATGTATGCAGAGCAAACACGAAGACTTGAATCgaATCAGATGGTAA
ATGAAGTCAGCAAATGGACTGAAAATTTGGAGGAgGCTAGTGGTAGACGT
CGTGTGAAAATGGAAAAGGCtcttatcaaagaagaaattagGTTGGGTAG
CAAAGCTTCCATTATGGTACGGAAGGCTCAATTGAAGCAACTTCTTACGA
CAGAACACGCCAAGTATGAAGAAGAGCTGAACAAACTTGGTCTTGCTTTT
TATCAAGAAAGATTATGATTTATTTTGACTACAAACACAAATCAGATTGT
ATTTCATTGTTTACACACTGTATATTTTATTGATCGCTTTTTAGTAAATA
AGAAAATGTCATTGTTAGCAACTTCCTATCGTTATGAAATCGACGGAAGT
AAACGAAAATCTTTACAAAAGGCTCTGGCAAGAGAAGAGTCAAGAATCAA
GGAAGATGAAATGTATGCAGAGCAAACACGAAGACTTGAATCgaATCAGA
TGGTAAATGAAGTCAGCAAATGGACTGAAAATTTGGAGGAgGCTAGTGGT
AGACGTCGTGTGAAAATGGAAAAGGCtcttatcaaagaagaaattagGTT
GGGTAGCAAAGCTTCCATTATGGTACGGAAGGCTCAATTGAAGCAACTTC
TTACGACAGAACACGCCAAGTATGAAGAAGAGCTGAACAAACTTGGTCTT
GCTTTTTATCAAGAAAGATTATGATTTATTTTGACTACAAACACAAATCA
GATTGTATTTCATTGTTTACACACTGTATATTTTATTGATCGCTTTTTAG
TAAATAAGAAAATGTCATTGTTAGCAACTTCCTATCGTTATGAAATCGAC
GGAAGTAAACGAAAATCTTTACAAAAGGCTCTGGCAAGAGAAGAGTCAAG
AATCAAGGAAGATGAAATGTATGCAGAGCAAACACGAAGACTTGAATCga
ATCAGATGGTAAATGAAGTCAGCAAATGGACTGAAAATTTGGAGGAgGCT
AGTGGTAGACGTCGTGTGAAAATGGAAAAGGCtcttatcaaagaagaaat
tagGTTGGGTAGCAAAGCTTCCATTATGGTACGGAAGGCTCAATTGAAGC
AACTTCTTACGACAGAACACGCCAAGTATGAAGAAGAGCTGAACAAACTT
GGTCTTGCTTTTTATCAAGAAAGATTATGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_015939	XLOC_015939	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00028157-protein	TCONS_00028157-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000667	supercontig	sc0000667:2280..16454 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
101.948	105.465	109.391	116.329	153.484	120.077	123.475	128.179	85.8241	81.898	64.5412	69.953	10.8609	8.21219	12.8683	11.7517	35.7478	38.4034	24.2629	23.098	26.736	27.7588	43.2488	39.7934	81.6285	58.7674	49.6599	36.9927	30.532	29.3821

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR029375	DUF4558

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00028157 vs. Swiss-Prot (Human)

BLAST of TCONS_00028157 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00028157 (transcript) - C. hemisphaerica