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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028185 ID=TCONS_00028185|Name=TCONS_00028185|organism=Clytia hemisphaerica|type=transcript|length=1824bp
GTCGAATGTGGAAAAAAATTTGGTGACAAATCTCTGggtaaataaaatgt
aaacgaCAAAAATTACTTCCCTAGATTAGTATTGTACGCCTGAAGAAAAG
ATGGAAGGAAGAGAAGAAAACATACAACAGAAATTAGAAGACTTAAATTC
TTGAACATAACACTGCaataaagaacaaaatataCTTTACTGAacatcaa
aaaatacaaaaaaacttataaaaaaatttcacatCGAACcctaaaatata
taaaatgtaaATATGAAACTATCTGACAGGTATATTTTCTTCAGTGATGc
ttttccaaaacaaaaataacatcCCTTTTATGTTCTAAGAGACCCTTGGT
CGCATTTGTTGTCTGGGCACCCTTTAAAAATTGAGGGACTATTTGTTTAT
TGGGAAGATCCCAGGTTCGTGGTCCACAAGAACTAGGCAAACAATCCGAA
AGGTGTTTTATAAGTCAGCACAAAATCTAGAAGGTTCAATTTTACAAATA
CGACCTCTTAAGAAGGTCTCTTATCCTATAAAAGAGCGCAAAATCTAGAT
GATTAATCCTACAAAAACGAGCTCCTTATCATATAAATATTTGATTGGAT
AGTCCATTGATTATAAAGTAAGTCAAGAAACTTGTTTCAAGGAAAAGATG
GTCAAATATATATCCTTTAACAAAGGAAATACCACTTTTACAgggatgat
ttttttaaaaagagctcTGCAACTCAGTTTAAGGGCCATTCACATATCTT
AGGTAAAATTGCAGTGAGGGAGTTTGATATGTTGAAGTTAGAAAATCTGA
TGAAGAATACTGATTTTTCTCGATTCATTTCAGATTGTTTTGCTTTATAG
CCTGAGGAGCCTTGCAAAAACAGCGAAACAATGCATCATGCAACCCCAGA
ATTGATACGTAAGTGGCCCCTTTTTAGAACTCGAAGCTGGTTAAAATTCA
ATATTAAACCATTACATGCATAAAAAAGTTAGTGAAACAtcgtaaaataa
aataaacaccGAGCTGTCAATAAATATTATCAATAAgttttaagtaaaaa
gtaaaaggAATGAAACCTATTGTGTAGAACTAAATTTGGGTCTAAGTACG
AAACGGGAGACTCGGTGACAAGGACATTAATGaatgtcaaactaaaaatg
tcaaatttcataccgaaaaatcaattgaaaaattgaaatcacaTTAATTT
GAGGATGAAACAATTAGACATATCACCAGAAATTAATAACAATCCTAAAA
TCCAAGGATATATAGATAACATATGACTATCGGATTATCTAGATAAagtt
ataaaaaagtgtgtctATTAGATCCAGACCTTTTGAGCATCAAGAGGTCC
GTGGTAATGCAGAAGATCAAAACAGATCTTATCGCGCGAGCAAGCAGTTT
TGCCATACTTTGCCAGAGCTTTTCCTGGGTTTTGATTAACTTGCAAGAGG
AGCTTGTTGAATCGAATCTTGAAATTTTCCGAGGGGAATGAAGCTTCTTT
TTGAAATACAATTTTCCAATGATCCGATGAAAATTCATAGTCGCTGTAAC
TCCAAGCGAACCCATCCATCTTCAGGGTAGACAAACTGTTAACACTGGAC
ACGCTTACTAAGATGATATTTCGAGCAGGATTCTCCATGTATAacttttt
ccaaacagttttaTCATCAGGTAAACAAAATTGGTATTGAATTTTATTAT
CTTCAAGAAATTTGCTCACAACTAATCttctatactaaatgagtttatga
aaaatgtctgtaacgctagcccagtaacatatgttaaggtttctaaaatt
tgaacgccgcggctggaaaaccta Run BLAST on NCBI protein sequence of TCONS_00028185-protein >TCONS_00028185-protein ID=TCONS_00028185-protein|Name=TCONS_00028185-protein|organism=Clytia hemisphaerica|type=polypeptide|length=106bp
MENPARNIILVSVSSVNSLSTLKMDGFAWSYSDYEFSSDHWKIVFQKEAS
FPSENFKIRFNKLLLQVNQNPGKALAKYGKTACSRDKICFDLLHYHGPLD
AQKVWI Run BLAST on NCBI transcript from alignment at sc0000667:72197..74020 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028185 ID=TCONS_00028185|Name=TCONS_00028185|organism=Clytia hemisphaerica|type=transcript|length=1824bp|location=Sequence derived from alignment at sc0000667:72197..74020 (Clytia hemisphaerica)
taggttttccagccgcggcgttcaaattttagaaaccttaacatatgtta
ctgggctagcgttacagacatttttcataaactcatttagtatagaaGAT
TAGTTGTGAGCAAATTTCTTGAAGATAATAAAATTCAATACCAATTTTGT
TTACCTGATGAtaaaactgtttggaaaaagtTATACATGGAGAATCCTGC
TCGAAATATCATCTTAGTAAGCGTGTCCAGTGTTAACAGTTTGTCTACCC
TGAAGATGGATGGGTTCGCTTGGAGTTACAGCGACTATGAATTTTCATCG
GATCATTGGAAAATTGTATTTCAAAAAGAAGCTTCATTCCCCTCGGAAAA
TTTCAAGATTCGATTCAACAAGCTCCTCTTGCAAGTTAATCAAAACCCAG
GAAAAGCTCTGGCAAAGTATGGCAAAACTGCTTGCTCGCGCGATAAGATC
TGTTTTGATCTTCTGCATTACCACGGACCTCTTGATGCTCAAAAGGTCTG
GATCTAATagacacacttttttataactTTATCTAGATAATCCGATAGTC
ATATGTTATCTATATATCCTTGGATTTTAGGATTGTTATTAATTTCTGGT
GATATGTCTAATTGTTTCATCCTCAAATTAAtgtgatttcaatttttcaa
ttgatttttcggtatgaaatttgacatttttagtttgacattCATTAATG
TCCTTGTCACCGAGTCTCCCGTTTCGTACTTAGACCCAAATTTAGTTCTA
CACAATAGGTTTCATTccttttactttttacttaaaacTTATTGATAATA
TTTATTGACAGCTCggtgtttattttattttacgaTGTTTCACTAACTTT
TTTATGCATGTAATGGTTTAATATTGAATTTTAACCAGCTTCGAGTTCTA
AAAAGGGGCCACTTACGTATCAATTCTGGGGTTGCATGATGCATTGTTTC
GCTGTTTTTGCAAGGCTCCTCAGGCTATAAAGCAAAACAATCTGAAATGA
ATCGAGAAAAATCAGTATTCTTCATCAGATTTTCTAACTTCAACATATCA
AACTCCCTCACTGCAATTTTACCTAAGATATGTGAATGGCCCTTAAACTG
AGTTGCAgagctctttttaaaaaaatcatcccTGTAAAAGTGGTATTTCC
TTTGTTAAAGGATATATATTTGACCATCTTTTCCTTGAAACAAGTTTCTT
GACTTACTTTATAATCAATGGACTATCCAATCAAATATTTATATGATAAG
GAGCTCGTTTTTGTAGGATTAATCATCTAGATTTTGCGCTCTTTTATAGG
ATAAGAGACCTTCTTAAGAGGTCGTATTTGTAAAATTGAACCTTCTAGAT
TTTGTGCTGACTTATAAAACACCTTTCGGATTGTTTGCCTAGTTCTTGTG
GACCACGAACCTGGGATCTTCCCAATAAACAAATAGTCCCTCAATTTTTA
AAGGGTGCCCAGACAACAAATGCGACCAAGGGTCTCTTAGAACATAAAAG
GgatgttatttttgttttggaaaagCATCACTGAAGAAAATATACCTGTC
AGATAGTTTCATATttacattttatatattttaggGTTCGatgtgaaatt
tttttataagtttttttgtattttttgatgtTCAGTAAAGtatattttgt
tctttattGCAGTGTTATGTTCAAGAATTTAAGTCTTCTAATTTCTGTTG
TATGTTTTCTTCTCTTCCTTCCATCTTTTCTTCAGGCGTACAATACTAAT
CTAGGGAAGTAATTTTTGtcgtttacattttatttaccCAGAGATTTGTC
ACCAAATTTTTTTCCACATTCGAC Coding sequence (CDS) from alignment at sc0000667:72197..74020 >TCONS_00028185 ID=TCONS_00028185|Name=TCONS_00028185|organism=Clytia hemisphaerica|type=CDS|length=321bp|location=Sequence derived from alignment at sc0000667:72197..74020 (Clytia hemisphaerica)
ATGGAGAATCCTGCTCGAAATATCATCTTAGTAAGCGTGTCCAGTGTTAA
CAGTTTGTCTACCCTGAAGATGGATGGGTTCGCTTGGAGTTACAGCGACT
ATGAATTTTCATCGGATCATTGGAAAATTGTATTTCAAAAAGAAGCTTCA
TTCCCCTCGGAAAATTTCAAGATTCGATTCAACAAGCTCCTCTTGCAAGT
TAATCAAAACCCAGGAAAAGCTCTGGCAAAGTATGGCAAAACTGCTTGCT
CGCGCGATAAGATCTGTTTTGATCTTCTGCATTACCACGGACCTCTTGAT
GCTCAAAAGGTCTGGATCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028185-exon-sc0000667-1491911889:72197..74020 | TCONS_00028185-exon-sc0000667-1491911889:72197..74020 | Clytia hemisphaerica | exon |
| TCONS_00028185-exon-sc0000667-1510915933:72197..74020 | TCONS_00028185-exon-sc0000667-1510915933:72197..74020 | Clytia hemisphaerica | exon |
| TCONS_00028185-exon-sc0000667-1575043694:72197..74020 | TCONS_00028185-exon-sc0000667-1575043694:72197..74020 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000667 | supercontig | sc0000667:72197..74020 . |
Blast
The following BLAST results are available for this feature:
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