TCONS_00028221 (transcript) - C. hemisphaerica

Overview
NameTCONS_00028221
Unique NameTCONS_00028221
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3596

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00028221 ID=TCONS_00028221|Name=TCONS_00028221|organism=Clytia hemisphaerica|type=transcript|length=3596bp
ACTTTATTCACTGCACACAGTTGTTaaaaaaagtagcGATATAGTCTAAT
ACTTTTTGTTGTATAAAACCGACATTGAAAATGGCTGGAACAAAAGCCAA
ATTTGGTTGTTTTCTTGCTTTGGGAATAGTGATTGTTTTCATTGGTTTTG
TGATGACCATGTATGGTTATCTTCACAAACCTTTTTGGTCAAATAGCTCG
GAATCATGGTGTGATTTTTGTAATGATGATAATGAGAGAGACcgacaaaa
tataaaaaatactaGAATTGTTGGACCAATCTTTCTTTGTTTGGGAATAG
TTGTGATAATTGTGGCTGTATTTTATCGGCGATCTCAGATAAAGAGCCAT
GTGAATCAAGGTATAAATGCAACAGCTTCACATGGAGGTGCTGTAGTTGG
ATATTCATCAGTAGGAGAATCAGCACCAGGTCAACCTCCCTACCAACAGC
CACCTGCTTACCAGCCAACAAACAACACGTATCCACCACAGCAATACCCA
CCACAACAGTATCCACCTCAACAACAGACTTATCCTTCCCAAGCTCAGCC
ATATCCTTCCCAAGCTCAGCCATATCCTGCTGCACAAACTCAATATCCTG
TGGGACCTACCCCGTACCCACCTCCTCAAGCTGGTCCACAAGGTACTCCT
TATCCACCACCAAGTGGAGCATACCCACAACAACAAGCTGCTCCAATCCC
AGCTAAATCTGATTATCCAGCGCCACCCTCGTACAATGAGGCTACAATGC
CATCAGCACCGCCATCGTAAAACGTGTTGATTttggcaaaatcaattttt
tcgtCATTAAAACACTAAAAAATCTTTCATAAGCTATAATAATTATGTCC
AATGGTTTATTAGATCTATTAAcataaaattttgcttcatttgatagaga
ttaaaaaaaatgctgaaaaattgaTGTGTGTAAAAGGAGCCTATTAATAA
ACTCCTTATGTCTTTCaataatcttttttcttttattttgtactTTGATT
GTAATTTTGATATACAGCAGACTTTCAATTCGGGCAATcgcgcaattttt
tttctaaattcctgcattcacaaaatctttttcaaaattcacgaaaattc
tGTTCATGGGAAGTTTTTCAATTTATGCATAGTCCATTCATGCATTCATG
CAAAATGTTGGAGGACATGGAAattatgttttcttttgttagtttagaaa
ttatttttatacataAGATTTTTACAGACACCTTTCTCCAGGAaacttgt
tttaaatttttggtatgcatgatcattattttttttggtgtttttctttt
ttaccttACTTTTATAGTATTATTAGTCTTGGGGCATCTTGTACAATCTT
TATAAGGTGAAActaatttgattagttgttttacgggcccgaccgaccct
gaaattccgaaaattgaataaaaataaaattggtttTGGTGATacatttg
tattttcattgcttatacagactgccaaattttcaaaattttggtagttt
tgtttaatttttgattttatccatgaattcgagctttttgtgccttttta
tcttttattttgcaattttgttaAGATGTAGCAGTTTTTgttgccttttt
aggagattttaaagatgaaattctacttttatccTTATTTTCTCGCCGAT
CGACTGACCCTcctttttgggtagcttggcctgtaaaacaactaattaaa
ttggcctcgcctaatATTAAAATGTAAATAAGCCAAAAAAAAACCCAACA
ATCAATCAAACTGTTCAAAAGTATAATTTCTACAAGTAGTGCTGAAATTA
GGTTGCAAGCAATCCTCTGAATTATTTTGTCACAAGGGATGTGAATCAGC
CTCTAAAATCAAATCCACTTTGCACTTTCTTTGTAAACCCAAGTTTTTTG
AGGTGGGGGTTGTTGGTCATTAAAATTGTAGGAAGAACATCTTGATACAC
AAGCTCATAATAAATTggctttattttttctttatctttcttAAAGAGCT
TTTGTATGGTAATTCGTTTCAATCTTTCAAGCCTTCTCAAAGTCCATTCA
GTAACCTATTAGGTGATACTTTTACCAACCAGTTAGACGTAAATAAAGTG
GAATATCAGAGCCCTATAAAgtccatttttaattttgattgcCATTTTTA
GATACATGCATgtagtttttttgaattttaaattgtATGATATTATGATT
GATCAGCTTTTACAATGTCAGCAAAATAAGGGAAGAGACTTCCATATTCA
GTTTGGCTTCATGCATTATTCATATAAAATGGCTTACTATACACTAACAC
TAAAGTGTTTTTTGGTCTCTTTTTCAACTtaatagaattttcaaagaaat
gaaCAGTTCTCAGTTAGTTAAAACGTCTTACTCTATATAAAAACCATATT
TCCCCCTTTTGGTTTAAAGTCAAACATGCGGTGAATAATATTACATCTAT
CTTAGAAAAGAGAACTTCATAAAACCTCAGAGTTATATCTACTGACGTCT
GTTTGTAAACTCTTGTTTATACTCATTCAGTTTTTTATGTCTTCGTTATT
TGATAATTGAAACCTTTGTAACTTTTGAGGCTTATTTTTGTAACATGAAA
AAGCATAAattgtttttatcattttaggAATTAacttgcaaaaaaattaa
aaactatttAATCAACTGAAACTACATACAATTTAGCTTGTAAACTTGAA
AACCAAAATGGGCTTATCAACTAAAACCAGATATTATCTACTATGTTTCT
CTGCTTGTGTGTGTATTGTTTCTGGCTTTATAATGACAATGTATGGCTTT
ATTCATGAACCTACAAAAGACCCTGACTGTGAATGGTTTTGTAATCTGGA
TGAGACTGTTCTGTTAAGTCAATTAAAATCTTGGGGACCTATACTTCTTG
TATTTGGTGTTGTATTTACAGCAGCAGCCTTTTGGTATTACAAGCGTAGA
CTGCTTCCATTACAAGACTATCATTCACGACAGCAACAGACCTATGCTGT
AGTTCAACAGCAGCAAATTGGAGCCACTGCGCCGCCAGCTTCCTACCCTT
CCATACCAGGAGGTAACTACCCACAACAGTCTGGGTATCCTCCACCTACA
ACGCAACCAGGCTACTACCCAGCTGGAGCCTACCTGCCACCAGGACAGTA
CCCTTCCCCACCTCCAGGACAGTATCCTCCCCCACCACACCAATATCCTC
TTCAACAGCAAACACCAACGCAACATCCTAACTATCAGCAAAATGCAACT
GTTCTAGGCATGGCTAATACCTTACCACCTCCAGCATACAGCGAAATTTC
TGGTGCAaaataaattgttcttttatCAGTATTTTCCTGTCTGTACTTTT
TTGTACATTATATAGttataaaaaagataattttctgCACACAAGTATTT
AAATTAAGAGATTTtaattagatttattttaatattACCATATTTGATTA
TGTAAATTTACTACTATACTTATTTTTGGCCTTGTAAATAGAAAGTTAGT
TTTAAGCACCATTTTGTTTTGTACTTTCATTAATACCGACAAGCATAAAT
CTTGTCactttttgacactaaaatgtGAGGGAGGTATTGTAAAAAT
Run BLAST on NCBI

protein sequence of TCONS_00028221-protein

>TCONS_00028221-protein ID=TCONS_00028221-protein|Name=TCONS_00028221-protein|organism=Clytia hemisphaerica|type=polypeptide|length=229bp
MAGTKAKFGCFLALGIVIVFIGFVMTMYGYLHKPFWSNSSESWCDFCNDD
NERDRQNIKNTRIVGPIFLCLGIVVIIVAVFYRRSQIKSHVNQGINATAS
HGGAVVGYSSVGESAPGQPPYQQPPAYQPTNNTYPPQQYPPQQYPPQQQT
YPSQAQPYPSQAQPYPAAQTQYPVGPTPYPPPQAGPQGTPYPPPSGAYPQ
QQAAPIPAKSDYPAPPSYNEATMPSAPPS
Run BLAST on NCBI

transcript from alignment at sc0000670:133555..139954-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00028221 ID=TCONS_00028221|Name=TCONS_00028221|organism=Clytia hemisphaerica|type=transcript|length=6400bp|location=Sequence derived from alignment at sc0000670:133555..139954- (Clytia hemisphaerica)
ACTTTATTCACTGCACACAGTTGTTGTAGTACGTCTATCTCATCAATCAC
ACAGCTTTGAAGACAATCAGGTTACTTTATCTTTTTCTAGTCAAAAGTTT
CCAAATAAATATGTACTCTTTCTATTTTTCTTAATCTTTTCATGATGACT
TTTAATTTTGCTCAGCATTACTTCATCACCAAGAAGTTTAAAGGGATATT
CAGATGGTTTGAGATATTTTAGATGACAGGAACCATGCAGTGGAGCGAGG
GAAACTTGCATGATACATATAATAGCCATCATCCAATGGACAAATGGGTA
CAAATGACTGTCCAATAATAGACAGGAGAATCGTCGTGTGTTTTTTCATA
ATTTTATGTATATACACAAGAAAGACAGGTTCGAGCTGTGAGTCCAATAT
TGGACAATGACCACTATACCATAGCGCCATCTCTTTGAACTATCTGACGT
TTAAATGTGGCGTCAAAAATGTTTTTGAAGACTTTATAGTGATTTGTCAT
TTCTAACGTATCTCGTTTCACTGATGATTGGGGTGGAGGCAAGGGGGGAG
ATTTAGTCAACTCTCAATATAATACTGCTCTATCTATTAATTTATGGAGA
TAGAACCAAAAGGTTTAAACTAATTTCTTTCCTAGGGATTTTTCATAATC
ATCCTTGACATTAAACTATATTACTTTGTTAAAATCAAAGTGCTAATTTG
TCCACAGCTAAATTTTTTCTGATTTTTCTTGTGATTTACAGAACATTTTC
CTGGTGTTCATAAATTTTCACATTATTTCTAATGATATTTAGAAAAAAAC
AAAGAGTGCGTAGTAAAGTCCCTGATTAGGGCATCATGCCCAAAATAATT
TTAATCACATCATGACGCCAAAATATTCTCTTATCAACTAAATATATTTT
GTGCTTTTTGAGATAATGGGTTTTACCATCATACTGAAAAAAAACCTAAT
ACTACTTGGGGGTATTGNTTGGACAATGACCACTATACCATAGCGCCATC
TCTTTGAACTATCTGACGTTTAAATGTGGCGTCAAAAATGTTTTTGAAGA
CTTTATAGTGATTTGTCATTTCTAACGTATCTCGTTTCACTGATGATTGG
GGTGGAGGCAAGGGGGGAGATTTAGTCAACTCTCAATAGAATACTGCTCT
ATCTATTAATTTATGGAGATAAAACCGAAAGGTTTAAACTAATTTCTTTC
CTAGGGATTTTTCATAATCATCCTTGACATTAAACTATATTACTTTGTTA
AAATCAAAGTGCTCATTTGTCCACAGCTAAATTTTTTCTGATTTTTCTTG
TGATTTACAGAACATTTTCCTGGTGTTCATAAATTTTCACATTATTTCTA
ATGATATTTAGAAAAAAACAAAGAGTGCGTAGTAAAGTCCCTGATTAGGG
CATCATGCCCAAAATAATTTTAATCACATCATGACGCCAAAATATTCTCT
TATCAACTAAATATATTTTGTGCTTTTTGAGATAATGGGTTTTACCATCA
TACTGAAAAAAGCCTAATACTACTTGGGGGTATTATTGCTTACCATGTTG
TAACCATCCCCATTCTTATGCAATATATCAACAGTTAGAAATATCAACAT
ATCCCCTGTTTTTGTTGCCAAAAAATAAACTGATAAAATTAAATCGATTG
CTGATTGTACACTTTTTTTATAAAAGTTACCAGTTGCTAAGGTTGGAAGC
CTTGAAATCAGCAAAATATTTTTAATAAAGTCTCTTAAAAGGAACACTTT
TCGTGATATTAACAATAGCACATGACTAAACAAGCATGATATTAGGCACC
GCCCCTATTGCTCAAAAATTAAGCTTATAATAGAATGCAAAGCAACCCCA
GCCATAAGCCCAAAATCAGGGTTGCTTATTATATAGAGAGAGATTTATGT
TACCATTTTTACTCTATAAAAAATGGTCAAATTAAGAAAACTTGTTGTAT
TTAATTTTAGAAAAAAAGTAGCGATATAGTCTAATACTTTTTGTTGTATA
AAACCGACATTGAAAATGGCTGGAACAAAAGCCAAATTTGGTTGTTTTCT
TGCTTTGGGAATAGTGATTGTTTTCATTGGTTTTGTGATGACCATGTATG
GTTATCTTCACAAACCTTTTTGGTCAAATAGCTCGGAATCATGGTGTGAT
TTTTGTAATGATGATAATGAGAGAGACCGACAAAATATAAAAAATACTAG
AATTGTTGGACCAATCTTTCTTTGTTTGGGAATAGTTGTGATAATTGTGG
CTGTATTTTATCGGCGATCTCAGATAAAGAGCCATGTGAATCAAGGTATA
AATGCAACAGCTTCACATGGAGGTGCTGTAGTTGGATATTCATCAGTAGG
AGAATCAGCACCAGGTCAACCTCCCTACCAACAGCCACCTGCTTACCAGC
CAACAAACAACACGTATCCACCACAGCAATACCCACCACAACAGTATCCA
CCTCAACAACAGACTTATCCTTCCCAAGCTCAGCCATATCCTTCCCAAGC
TCAGCCATATCCTGCTGCACAAACTCAATATCCTGTGGGACCTACCCCGT
ACCCACCTCCTCAAGCTGGTCCACAAGGTACTCCTTATCCACCACCAAGT
GGAGCATACCCACAACAACAAGCTGCTCCAATCCCAGCTAAATCTGGTAA
GTTACTGAGAATAATAGTATTGATTTAACTTTACCTTTTTCACACTTTTG
GATAACCTTCTGTCTCTGTCTATTATTATTTGTATGATGGCTTTTTGCAA
GTCTTTTGTTTAGAATAGAATTGGTATCTCCAAAATGTAATTTCTACATT
TCACATAGAATTTTAATTTGAAAACACAAAATTCAAAACAGTTTTTGAAG
GAATATATTAGGTTGAATCAGCAATTTTGGTCCTCGTGTGTTTTTTTCCT
TATTATTTCTACGATATCTTTATTTTCAGATTATCCAGCGCCACCCTCGT
ACAATGAGGCTACAATGCCATCAGCACCGCCATCGTAAAACGTGTTGATT
TTGGCAAAATCAATTTTTTCGTCATTAAAACACTAAAAAATCTTTCATAA
GCTATAATAATTATGTCCAATGGTTTATTAGATCTATTAACATAAAATTT
TGCTTCATTTGATAGAGATTAAAAAAAATGCTGAAAAATTGATGTGTGTA
AAAGGAGCCTATTAATAAACTCCTTATGTCTTTCAATAATCTTTTTTCTT
TTATTTTGTACTTTGATTGTAATTTTGATATACAGCAGACTTTCAATTCG
GGCAATCGCGCAATTTTTTTTCTAAATTCCTGCATTCACAAAATCTTTTT
CAAAATTCACGAAAATTCTGTTCATGGGAAGTTTTTCAATTTATGCATAG
TCCATTCATGCATTCATGCAAAATGTTGGAGGACATGGAAATTATGTTTT
CTTTTGTTAGTTTAGAAATTATTTTTATACATAAGATTTTTACAGACACC
TTTCTCCAGGAAACTTGTTTTAAATTTTTGGTATGCATGATCATTATTTT
TTTTGGTGTTTTTCTTTTTTACCTTACTTTTATAGTATTATTAGTCTTGG
GGCATCTTGTACAATCTTTATAAGGTGAAACTAATTTGATTAGTTGTTTT
ACGGGCCCGACCGACCCTGAAATTCCGAAAATTGAATAAAAATAAAATTG
GTTTTGGTGATACATTTGTATTTTCATTGCTTATACAGACTGCCAAATTT
TCAAAATTTTGGTAGTTTTGTTTAATTTTTGATTTTATCCATGAATTCGA
GCTTTTTGTGCCTTTTTATCTTTTATTTTGCAATTTTGTTAAGATGTAGC
AGTTTTTGTTGCCTTTTTAGGAGATTTTAAAGATGAAATTCTACTTTTAT
CCTTATTTTCTCGCCGATCGACTGACCCTCCTTTTTGGGTAGCTTGGCCT
GTAAAACAACTAATTAAATTGGCCTCGCCTAATATTAAAATGTAAATAAG
CCAAAAAAAAACCCAACAATCAATCAAACTGTTCAAAAGTATAATTTCTA
CAAGTAGTGCTGAAATTAGGTTGCAAGCAATCCTCTGAATTATTTTGTCA
CAAGGGATGTGAATCAGCCTCTAAAATCAAATCCACTTTGCACTTTCTTT
GTAAACCCAAGTTTTTTGAGGTGGGGGTTGTTGGTCATTAAAATTGTAGG
AAGAACATCTTGATACACAAGCTCATAATAAATTGGCTTTATTTTTTCTT
TATCTTTCTTAAAGAGCTTTTGTATGGTAATTCGTTTCAATCTTTCAAGC
CTTCTCAAAGTCCATTCAGTAACCTATTAGGTGATACTTTTACCAACCAG
TTAGACGTAAATAAAGTGGAATATCAGAGCCCTATAAAGTCCATTTTTAA
TTTTGATTGCCATTTTTAGATACATGCATGTAGTTTTTTTGAATTTTAAA
TTGTATGATATTATGATTGATCAGCTTTTACAATGTCAGCAAAATAAGGG
AAGAGACTTCCATATTCAGTTTGGCTTCATGCATTATTCATATAAAATGG
CTTACTATACACTAACACTAAAGTGTTTTTTGGTCTCTTTTTCAACTTAA
TAGAATTTTCAAAGAAATGAACAGTTCTCAGTTAGTTAAAACGTCTTACT
CTATATAAAAACCATATTTCCCCCTTTTGGTTTAAAGTCAAACATGCGGT
GAATAATATTACATCTATCTTAGAAAAGAGAACTTCATAAAACCTCAGAG
TTATATCTACTGACGTCTGTTTGTAAACTCTTGTTTATACTCATTCAGTT
TTTTATGTCTTCGTTATTTGATAATTGAAACCTTTGTAACTTTTGAGGCT
TATTTTTGTAACATGAAAAAGCATAAATTGTTTTTATCATTTTAGGAATT
AACTTGCAAAAAAATTAAAAACTATTTAATCAACTGAAACTACATACAAT
TTAGCTTGTAAACTTGAAAACCAAAATGGGCTTATCAACTAAAACCAGAT
ATTATCTACTATGTTTCTCTGCTTGTGTGTGTATTGTTTCTGGCTTTATA
ATGACAATGTATGGCTTTATTCATGAACCTACAAAAGACCCTGACTGTGA
ATGGTTTTGTAATCTGGATGAGACTGTTCTGTTAAGTCAATTAAAATCTT
GGGGACCTATACTTCTTGTATTTGGTGTTGTATTTACAGCAGCAGCCTTT
TGGTATTACAAGCGTAGACTGCTTCCATTACAAGACTATCATTCACGACA
GCAACAGACCTATGCTGTAGTTCAACAGCAGCAAATTGGAGCCACTGCGC
CGCCAGCTTCCTACCCTTCCATACCAGGAGGTAACTACCCACAACAGTCT
GGGTATCCTCCACCTACAACGCAACCAGGCTACTACCCAGCTGGAGCCTA
CCTGCCACCAGGACAGTACCCTTCCCCACCTCCAGGACAGTATCCTCCCC
CACCACACCAATATCCTCTTCAACAGCAAACACCAACGCAACATCCTAAC
TATCAGCAAAATGCAACTGTTCTAGGTAATAAGTTCATATTCTTTAGTAG
TTTGGTGGTAATACCCTTGATCTGGGAAGTTGGTAATTCTTAACTCTCAC
ACTAGTATCCAAATATATACCCCTGTGTCACAGACCCGCTGGGTGCCCAG
CCCCATTGGAAAGATTGACAAAAATTTCGTCCCTGTGGCGAAAATACCTT
AGAATTTCAGCCCCACTTGGAAATTAACTTTTATTTCATCCCCATTCGAA
ATTCAATGTTAAAAATTGCACTTCAAAACCATTGCCACTAAATCTTTTAA
CCTTGGAACTAAGGAATTTCTATCCCATTTGGGATTTCAATAGGAATTTT
TATCCCAACTGAGAAAAAAGTTCCACCAGGGCTGTAAGACAGGGGTGTAG
ATATGGCTAGCTTGTTTGAAACGTCTGTACAGTTGCATGATTGCAACCAG
TGGACACATGTTTTCTATTGTAACAGTTTGTCTAATGTTGACTGACTAAA
AGGTAGCAACAAAGGCTGATAAACAATATCTTAATATTCTCATTGGAAAT
TTTGTTATAATTATTTTAAGTAGGAAAAAAGAATTCTTTTATTTTTTTCT
ATCTATTTCAGGCATGGCTAATACCTTACCACCTCCAGCATACAGCGAAA
TTTCTGGTGCAAAATAAATTGTTCTTTTATCAGTATTTTCCTGTCTGTAC
TTTTTTGTACATTATATAGTTATAAAAAAGATAATTTTCTGCACACAAGT
ATTTAAATTAAGAGATTTTAATTAGATTTATTTTAATATTACCATATTTG
ATTATGTAAATTTACTACTATACTTATTTTTGGCCTTGTAAATAGAAAGT
TAGTTTTAAGCACCATTTTGTTTTGTACTTTCATTAATACCGACAAGCAT
AAATCTTGTCACTTTTTGACACTAAAATGTGAGGGAGGTATTGTAAAAAT

Coding sequence (CDS) from alignment at sc0000670:133555..139954-

>TCONS_00028221 ID=TCONS_00028221|Name=TCONS_00028221|organism=Clytia hemisphaerica|type=CDS|length=1380bp|location=Sequence derived from alignment at sc0000670:133555..139954- (Clytia hemisphaerica)
ATTATCCAGCGCCACCCTCGTACAATGAGGCTACAATGCCATCAGCACCG
CCATCGTAAATGGCTGGAACAAAAGCCAAATTTGGTTGTTTTCTTGCTTT
GGGAATAGTGATTGTTTTCATTGGTTTTGTGATGACCATGTATGGTTATC
TTCACAAACCTTTTTGGTCAAATAGCTCGGAATCATGGTGTGATTTTTGT
AATGATGATAATGAGAGAGACCGACAAAATATAAAAAATACTAGAATTGT
TGGACCAATCTTTCTTTGTTTGGGAATAGTTGTGATAATTGTGGCTGTAT
TTTATCGGCGATCTCAGATAAAGAGCCATGTGAATCAAGGTATAAATGCA
ACAGCTTCACATGGAGGTGCTGTAGTTGGATATTCATCAGTAGGAGAATC
AGCACCAGGTCAACCTCCCTACCAACAGCCACCTGCTTACCAGCCAACAA
ACAACACGTATCCACCACAGCAATACCCACCACAACAGTATCCACCTCAA
CAACAGACTTATCCTTCCCAAGCTCAGCCATATCCTTCCCAAGCTCAGCC
ATATCCTGCTGCACAAACTCAATATCCTGTGGGACCTACCCCGTACCCAC
CTCCTCAAGCTGGTCCACAAGGTACTCCTTATCCACCACCAAGTGGAGCA
TACCCACAACAACAAGCTGCTCCAATCCCAGCTAAATCTGATTATCCAGC
GCCACCCTCGTACAATGAGGCTACAATGCCATCAGCACCGCCATCGTAAA
TGGCTGGAACAAAAGCCAAATTTGGTTGTTTTCTTGCTTTGGGAATAGTG
ATTGTTTTCATTGGTTTTGTGATGACCATGTATGGTTATCTTCACAAACC
TTTTTGGTCAAATAGCTCGGAATCATGGTGTGATTTTTGTAATGATGATA
ATGAGAGAGACCGACAAAATATAAAAAATACTAGAATTGTTGGACCAATC
TTTCTTTGTTTGGGAATAGTTGTGATAATTGTGGCTGTATTTTATCGGCG
ATCTCAGATAAAGAGCCATGTGAATCAAGGTATAAATGCAACAGCTTCAC
ATGGAGGTGCTGTAGTTGGATATTCATCAGTAGGAGAATCAGCACCAGGT
CAACCTCCCTACCAACAGCCACCTGCTTACCAGCCAACAAACAACACGTA
TCCACCACAGCAATACCCACCACAACAGTATCCACCTCAACAACAGACTT
ATCCTTCCCAAGCTCAGCCATATCCTTCCCAAGCTCAGCCATATCCTGCT
GCACAAACTCAATATCCTGTGGGACCTACCCCGTACCCACCTCCTCAAGC
TGGTCCACAAGGTACTCCTTATCCACCACCAAGTGGAGCATACCCACAAC
AACAAGCTGCTCCAATCCCAGCTAAATCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015976XLOC_015976Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028221-proteinTCONS_00028221-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028221-exon-sc0000670-1575043694:139930..139954TCONS_00028221-exon-sc0000670-1575043694:139930..139954Clytia hemisphaericaexon
TCONS_00028221-exon-sc0000670-1575043694:137309..137994TCONS_00028221-exon-sc0000670-1575043694:137309..137994Clytia hemisphaericaexon
TCONS_00028221-exon-sc0000670-1575043694:134480..137025TCONS_00028221-exon-sc0000670-1575043694:134480..137025Clytia hemisphaericaexon
TCONS_00028221-exon-sc0000670-1575043694:133555..133893TCONS_00028221-exon-sc0000670-1575043694:133555..133893Clytia hemisphaericaexon
TCONS_00028221-exon-sc0000670-1510915933:139930..139954TCONS_00028221-exon-sc0000670-1510915933:139930..139954Clytia hemisphaericaexon
TCONS_00028221-exon-sc0000670-1510915933:137309..137994TCONS_00028221-exon-sc0000670-1510915933:137309..137994Clytia hemisphaericaexon
TCONS_00028221-exon-sc0000670-1510915933:134480..137025TCONS_00028221-exon-sc0000670-1510915933:134480..137025Clytia hemisphaericaexon
TCONS_00028221-exon-sc0000670-1510915933:133555..133893TCONS_00028221-exon-sc0000670-1510915933:133555..133893Clytia hemisphaericaexon
TCONS_00028221-exon-sc0000670-1491911889:139930..139954TCONS_00028221-exon-sc0000670-1491911889:139930..139954Clytia hemisphaericaexon
TCONS_00028221-exon-sc0000670-1491911889:137309..137994TCONS_00028221-exon-sc0000670-1491911889:137309..137994Clytia hemisphaericaexon
TCONS_00028221-exon-sc0000670-1491911889:134480..137025TCONS_00028221-exon-sc0000670-1491911889:134480..137025Clytia hemisphaericaexon
TCONS_00028221-exon-sc0000670-1491911889:133555..133893TCONS_00028221-exon-sc0000670-1491911889:133555..133893Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000670supercontigsc0000670:133555..139954 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.7663	19.3923	15.3793	16.0499	19.6302	15.7265	14.4599	14.4628	11.8405	19.2254	20.4732	11.2191	10.6104	9.47892	8.10411	9.32808	10.9387	12.3119	10.9113	13.3415	9.90339	10.9289	13.9626	14.1715	10.4798	10.4176	14.7264	13.0128	17.6081	16.2549
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00028221 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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