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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028228 ID=TCONS_00028228|Name=TCONS_00028228|organism=Clytia hemisphaerica|type=transcript|length=1274bp
ccatatagtacgtacgcagtgaatgGGGGCGAGGGGGATTTAGCGAAAGC
GTacgtctattgtttaaatgacgtcatttctattgttctctgcgtacaag
gggggagggggtgtcaaatatttggaaaagttttgcgtacgtactatatg
gacggcccccaTGAGATCTTCTAAGGAATGAGTAATTTGAAATGAGGCTG
CATGGGTGGTACACGTTTTTCCAtgataagaacatccaaaattgctttag
cctttggatgttcttaaccttttgaattttgaaccttaaaatgttcttaa
cttgttcttaatattttgaccatcgaagcctttatGATCTTACATAGTTG
TTCTTAAATAAAAAACGTGATAttccaaaattggaaagttCCAACCCCAG
TCTCACTTCTCTGATTGGTATCTTTTGACGGTCTTTGCTAACCCCTGTCT
CGTAGCCCCGGGTCTGTGGGTCTTAGCTATTTAATGTAAAGTAAATGACA
AAGGTAGAACCATAAACATGTTAGAAAgggtttcttaaaaatattgatat
ttaacGATACTTGACTTTTATAACCATTCGCCTATAGCTCTTTCAGTTTG
TGCACTTAAAAAGGTTGCTTCAAATTCGCGATAACCTTCTTGTTTACACC
TTAAAGTGAACGAAACCAAATCTGTACAACTTAAAACCAATCCAAAGATC
AAGAAAATTGTGCCAGCGACCACACCTGAAATTCTTTTTATTTCGTCATC
TTTATTAGTCGTGTTATGTTTTTCTCCAATCGTAAATAAAGCTGCTCCAA
GAGCTATACAAATCAAACCAAAACCAAATATGCAGCCAGTCATTCTTGCC
ATTTTCACGCAAAACACAATATTGTCCTTTTCTGGtagtgttttttatct
ttttctcaaattttagtatcCAAACCGTTCTTTCCAGTATTTTTCCAATG
GGATAGGCTATCGATTTTACAGGAAGCTTTAGCCGTTGTCTTTTGGTTGG
GTCTCTGCTTTACACTTTTTAACTGAAAATGTTTCTTTCGCCAAATATAC
aacaaaattagatttttgcCAAATGTTCTGGGAAGTTTCACTTCTGTCAA
GAAAGTCTCCTCTTTTGTCAAAACCGTTCGTCACTATTATCATCTATATG
CATTATGTTATTGAAAACTGTTTCCAAACCTCTGTTCTGCCTATGACAAT
AAAAATACGATAAAATTATCTGTCTTGGATTAGATTTTATCAtgcatttt
ttgaatgttttcatAATACCTTTT Run BLAST on NCBI transcript from alignment at sc0000670:70057..71330 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028228 ID=TCONS_00028228|Name=TCONS_00028228|organism=Clytia hemisphaerica|type=transcript|length=1274bp|location=Sequence derived from alignment at sc0000670:70057..71330 (Clytia hemisphaerica)
AAAAGGTATTatgaaaacattcaaaaaatgcaTGATAAAATCTAATCCAA
GACAGATAATTTTATCGTATTTTTATTGTCATAGGCAGAACAGAGGTTTG
GAAACAGTTTTCAATAACATAATGCATATAGATGATAATAGTGACGAACG
GTTTTGACAAAAGAGGAGACTTTCTTGACAGAAGTGAAACTTCCCAGAAC
ATTTGgcaaaaatctaattttgttGTATATTTGGCGAAAGAAACATTTTC
AGTTAAAAAGTGTAAAGCAGAGACCCAACCAAAAGACAACGGCTAAAGCT
TCCTGTAAAATCGATAGCCTATCCCATTGGAAAAATACTGGAAAGAACGG
TTTGgatactaaaatttgagaaaaagataaaaaacactaCCAGAAAAGGA
CAATATTGTGTTTTGCGTGAAAATGGCAAGAATGACTGGCTGCATATTTG
GTTTTGGTTTGATTTGTATAGCTCTTGGAGCAGCTTTATTTACGATTGGA
GAAAAACATAACACGACTAATAAAGATGACGAAATAAAAAGAATTTCAGG
TGTGGTCGCTGGCACAATTTTCTTGATCTTTGGATTGGTTTTAAGTTGTA
CAGATTTGGTTTCGTTCACTTTAAGGTGTAAACAAGAAGGTTATCGCGAA
TTTGAAGCAACCTTTTTAAGTGCACAAACTGAAAGAGCTATAGGCGAATG
GTTATAAAAGTCAAGTATCgttaaatatcaatatttttaagaaacccTTT
CTAACATGTTTATGGTTCTACCTTTGTCATTTACTTTACATTAAATAGCT
AAGACCCACAGACCCGGGGCTACGAGACAGGGGTTAGCAAAGACCGTCAA
AAGATACCAATCAGAGAAGTGAGACTGGGGTTGGaactttccaattttgg
aaTATCACGTTTTTTATTTAAGAACAACTATGTAAGATCataaaggcttc
gatggtcaaaatattaagaacaagttaagaacattttaaggttcaaaatt
caaaaggttaagaacatccaaaggctaaagcaattttggatgttcttatc
aTGGAAAAACGTGTACCACCCATGCAGCCTCATTTCAAATTACTCATTCC
TTAGAAGATCTCAtgggggccgtccatatagtacgtacgcaaaacttttc
caaatatttgacaccccctccccccttgtacgcagagaacaatagaaatg
acgtcatttaaacaatagacgtACGCTTTCGCTAAATCCCCCTCGCCCCc
attcactgcgtacgtactatatgg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028228-exon-sc0000670-1491911889:70057..71330 | TCONS_00028228-exon-sc0000670-1491911889:70057..71330 | Clytia hemisphaerica | exon |
| TCONS_00028228-exon-sc0000670-1510915933:70057..71330 | TCONS_00028228-exon-sc0000670-1510915933:70057..71330 | Clytia hemisphaerica | exon |
| TCONS_00028228-exon-sc0000670-1575043694:70057..71330 | TCONS_00028228-exon-sc0000670-1575043694:70057..71330 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000670 | supercontig | sc0000670:70057..71330 . |
Blast
The following BLAST results are available for this feature:
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