|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028286 ID=TCONS_00028286|Name=TCONS_00028286|organism=Clytia hemisphaerica|type=transcript|length=798bp
GAAAGAaggttcattttctttttctcagaTGCTCCACATCTTATGAAAAC
TATGCGAAATGCTATCTATCACTCTCGCAGGGATGGCATAGGGACAAGAG
ATTTGTGGAACGGAAATCCAATTTTATGGAATCAAATTGTACATGTGGTT
CAAGATGACATGTATCGCAGTTTGAAGTTGCTGCCAAAATTATCTCTGGC
ACACATCAACCTAACTTCATACTCTTCAATGACTGTCAGTCTTGCAACAC
AGGTTTTGAGCTCAAAAATGTCAAGTGTCATCTATCGCTACTACCCTGAG
TACAAAACCACAGCCGACCTCTGTCAATACATGGATTGTTTTTTCGATTG
TTTTAACGTCAGGTCTCAGGAGGaaggaaaattgaaaagaaaaatctttt
tagaacCATTCCGAGATCAAAATGACTGGAGACTTGATTGGCTCCAAAAC
GTTTTTTTGGGTTATTTTGATAGTTGGAAGAGGAAGGTCTACTCGATAAC
AGATAAGACTGATAAGGAAAAGGAGAGAATGTTTATTCCCCATCAAACCT
ATGAAGGTATATGTATAAATGTTAGCTCACTTGTTGAATCAGTTAAATTC
CTCTTAAAAAGTGGTGCTGAATTTGTGCTGAATTTGTGCTGAATTTGTAC
TGACAGAGAGGTTTTGTCAAGATGTTTTGGAAGAATATTTTGGTCGTCAA
AGATGCATTTCTGGCTTCAATACAACACCTAGCGTTTTTCAGTTTGGGTA
TAATGCAAATGCTCTCCGTGTTCAAAGATTCATAACACCCACTCGAAC Run BLAST on NCBI protein sequence of TCONS_00028286-protein >TCONS_00028286-protein ID=TCONS_00028286-protein|Name=TCONS_00028286-protein|organism=Clytia hemisphaerica|type=polypeptide|length=213bp
ERRFIFFFSDAPHLMKTMRNAIYHSRRDGIGTRDLWNGNPILWNQIVHVV
QDDMYRSLKLLPKLSLAHINLTSYSSMTVSLATQVLSSKMSSVIYRYYPE
YKTTADLCQYMDCFFDCFNVRSQEEGKLKRKIFLEPFRDQNDWRLDWLQN
VFLGYFDSWKRKVYSITDKTDKEKERMFIPHQTYEGICINVSSLVESVKF
LLKSGAEFVLNLC Run BLAST on NCBI transcript from alignment at sc0000672:15144..15941 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028286 ID=TCONS_00028286|Name=TCONS_00028286|organism=Clytia hemisphaerica|type=transcript|length=798bp|location=Sequence derived from alignment at sc0000672:15144..15941 (Clytia hemisphaerica)
GTTCGAGTGGGTGTTATGAATCTTTGAACACGGAGAGCATTTGCATTATA
CCCAAACTGAAAAACGCTAGGTGTTGTATTGAAGCCAGAAATGCATCTTT
GACGACCAAAATATTCTTCCAAAACATCTTGACAAAACCTCTCTGTCAGT
ACAAATTCAGCACAAATTCAGCACAAATTCAGCACCACTTTTTAAGAGGA
ATTTAACTGATTCAACAAGTGAGCTAACATTTATACATATACCTTCATAG
GTTTGATGGGGAATAAACATTCTCTCCTTTTCCTTATCAGTCTTATCTGT
TATCGAGTAGACCTTCCTCTTCCAACTATCAAAATAACCCAAAAAAACGT
TTTGGAGCCAATCAAGTCTCCAGTCATTTTGATCTCGGAATGgttctaaa
aagatttttcttttcaattttccttCCTCCTGAGACCTGACGTTAAAACA
ATCGAAAAAACAATCCATGTATTGACAGAGGTCGGCTGTGGTTTTGTACT
CAGGGTAGTAGCGATAGATGACACTTGACATTTTTGAGCTCAAAACCTGT
GTTGCAAGACTGACAGTCATTGAAGAGTATGAAGTTAGGTTGATGTGTGC
CAGAGATAATTTTGGCAGCAACTTCAAACTGCGATACATGTCATCTTGAA
CCACATGTACAATTTGATTCCATAAAATTGGATTTCCGTTCCACAAATCT
CTTGTCCCTATGCCATCCCTGCGAGAGTGATAGATAGCATTTCGCATAGT
TTTCATAAGATGTGGAGCAtctgagaaaaagaaaatgaacctTCTTTC Coding sequence (CDS) from alignment at sc0000672:15144..15941 >TCONS_00028286 ID=TCONS_00028286|Name=TCONS_00028286|organism=Clytia hemisphaerica|type=CDS|length=642bp|location=Sequence derived from alignment at sc0000672:15144..15941 (Clytia hemisphaerica)
TCAGCACAAATTCAGCACAAATTCAGCACCACTTTTTAAGAGGAATTTAA
CTGATTCAACAAGTGAGCTAACATTTATACATATACCTTCATAGGTTTGA
TGGGGAATAAACATTCTCTCCTTTTCCTTATCAGTCTTATCTGTTATCGA
GTAGACCTTCCTCTTCCAACTATCAAAATAACCCAAAAAAACGTTTTGGA
GCCAATCAAGTCTCCAGTCATTTTGATCTCGGAATGgttctaaaaagatt
tttcttttcaattttccttCCTCCTGAGACCTGACGTTAAAACAATCGAA
AAAACAATCCATGTATTGACAGAGGTCGGCTGTGGTTTTGTACTCAGGGT
AGTAGCGATAGATGACACTTGACATTTTTGAGCTCAAAACCTGTGTTGCA
AGACTGACAGTCATTGAAGAGTATGAAGTTAGGTTGATGTGTGCCAGAGA
TAATTTTGGCAGCAACTTCAAACTGCGATACATGTCATCTTGAACCACAT
GTACAATTTGATTCCATAAAATTGGATTTCCGTTCCACAAATCTCTTGTC
CCTATGCCATCCCTGCGAGAGTGATAGATAGCATTTCGCATAGTTTTCAT
AAGATGTGGAGCAtctgagaaaaagaaaatgaacctTCTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028286-exon-sc0000672-1491911889:15144..15941 | TCONS_00028286-exon-sc0000672-1491911889:15144..15941 | Clytia hemisphaerica | exon |
| TCONS_00028286-exon-sc0000672-1510915933:15144..15941 | TCONS_00028286-exon-sc0000672-1510915933:15144..15941 | Clytia hemisphaerica | exon |
| TCONS_00028286-exon-sc0000672-1575043694:15144..15941 | TCONS_00028286-exon-sc0000672-1575043694:15144..15941 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000672 | supercontig | sc0000672:15144..15941 . |
Blast
The following BLAST results are available for this feature:
|
