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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028326 ID=TCONS_00028326|Name=TCONS_00028326|organism=Clytia hemisphaerica|type=transcript|length=1394bp
ATAACAGGTAAAGTGCATATCAAATAAAAGAGCGGTAACCCACCAAAAGC
ACATCAAATATTATTGGTTCTTCAATGTGGCTAAACCACCTTCACCATCA
TCGTCAATGTAAAGTCACTTTTATTCTATAAGGGTTTTGAACTACGAACA
ACTTTGGAAACCTCGTCACAGTTATTTTCGTTACCGACGACTTTAAAATA
CACACAGCTTTAAAACAATATCACATGCATCTATTGTTTTTACTTTCTCC
ACAAGTAATTTGTAGCGGCCAGGCAAACCAACTTCTAAATTAAAGAAACG
CAATTGGAAGACACAATCATGAAGATATCAACGATTCTTTTTATTACCTT
AATGGCATCGACAGCGAATTATCAACTCGTTTCTGCTTTCAGCTTCCTTT
TACCCGAAACAGGATGGGTTGATTCGAGTGGTGATTTACCTCCTCCTATG
GGCGGTGAAGAAGGCGACCCTATGGGTGGTGAAGAAACTGAAGGTCCAAC
AACGACTACAAAAACCTTTGATTTTACAATGCCAAACATACCGCCAGTTT
TAAAAACCACCCTACCACCCGTTGTAGAAAACACCTTACCACCCGTCGTA
GAAACCACCCTACCAACCGCTGTAGAAACCACCCTACCGCCCCTGATCAA
ATATAACGATACTGTCACTGAGGCGGTGAATCCCACAGGAGAAGAAAGCC
TGTTAGGAGGAGGTGGTTCTGAAGAAGATGATGATCCAACATTAAGTACA
GATGACGGAAACCTATCTACTTTCAAACTCGATTCTTCAGACAATGAAGC
GGAGACTTTGGGAATGAACACAAAAAAGGACAGTGATAACGACACCAATG
AGCCAGGCAGCTATTCGAGTAGCGGTGCAGATTTGAAGCTGGGAAACTTT
CGATTTTATATTGGGTTGGCTTTAGTTGGCATAATCTTCTGTTTAGTGTA
TTGAATATATAATGACAATCCTTTGCATGGGATAAATGTTGTATCGATAC
AATAAATTAAACACTTTCGTGAACTAATAGTTGAACCATGCAATCCTTTC
TCAAGACAATATCTTCTCTTTCCTGTCATTTTGTGACGAGTCGAGTGTGT
TGTTttatattgggctattccagaaagaatttgtaccccctatgacgttg
aggagatctttttttaatttattttattctctcgctaattcgaatttGTG
TTCATCGAATTCTCAGCCTTTGGAATCATGAAACTATTTTGTATAATCCA
TtccgtgtgacgtcattttcgcCCACAATCAGCcattttacaagaaatgg
tATAAGGAATATGTACAGGATGACTTAGTAACACTTTGATAGTTCAAAGT
CTTCAAATATTTCTGCAATGCTGGATAACAACATTTAATTTCCA Run BLAST on NCBI protein sequence of TCONS_00028326-protein >TCONS_00028326-protein ID=TCONS_00028326-protein|Name=TCONS_00028326-protein|organism=Clytia hemisphaerica|type=polypeptide|length=211bp
MKISTILFITLMASTANYQLVSAFSFLLPETGWVDSSGDLPPPMGGEEGD
PMGGEETEGPTTTTKTFDFTMPNIPPVLKTTLPPVVENTLPPVVETTLPT
AVETTLPPLIKYNDTVTEAVNPTGEESLLGGGGSEEDDDPTLSTDDGNLS
TFKLDSSDNEAETLGMNTKKDSDNDTNEPGSYSSSGADLKLGNFRFYIGL
ALVGIIFCLVY Run BLAST on NCBI transcript from alignment at sc0000673:114737..116130 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028326 ID=TCONS_00028326|Name=TCONS_00028326|organism=Clytia hemisphaerica|type=transcript|length=1394bp|location=Sequence derived from alignment at sc0000673:114737..116130 (Clytia hemisphaerica)
TGGAAATTAAATGTTGTTATCCAGCATTGCAGAAATATTTGAAGACTTTG
AACTATCAAAGTGTTACTAAGTCATCCTGTACATATTCCTTATaccattt
cttgtaaaatgGCTGATTGTGGgcgaaaatgacgtcacacggaATGGATT
ATACAAAATAGTTTCATGATTCCAAAGGCTGAGAATTCGATGAACACaaa
ttcgaattagcgagagaataaaataaattaaaaaaagatctcctcaacgt
catagggggtacaaattctttctggaatagcccaatataaAACAACACAC
TCGACTCGTCACAAAATGACAGGAAAGAGAAGATATTGTCTTGAGAAAGG
ATTGCATGGTTCAACTATTAGTTCACGAAAGTGTTTAATTTATTGTATCG
ATACAACATTTATCCCATGCAAAGGATTGTCATTATATATTCAATACACT
AAACAGAAGATTATGCCAACTAAAGCCAACCCAATATAAAATCGAAAGTT
TCCCAGCTTCAAATCTGCACCGCTACTCGAATAGCTGCCTGGCTCATTGG
TGTCGTTATCACTGTCCTTTTTTGTGTTCATTCCCAAAGTCTCCGCTTCA
TTGTCTGAAGAATCGAGTTTGAAAGTAGATAGGTTTCCGTCATCTGTACT
TAATGTTGGATCATCATCTTCTTCAGAACCACCTCCTCCTAACAGGCTTT
CTTCTCCTGTGGGATTCACCGCCTCAGTGACAGTATCGTTATATTTGATC
AGGGGCGGTAGGGTGGTTTCTACAGCGGTTGGTAGGGTGGTTTCTACGAC
GGGTGGTAAGGTGTTTTCTACAACGGGTGGTAGGGTGGTTTTTAAAACTG
GCGGTATGTTTGGCATTGTAAAATCAAAGGTTTTTGTAGTCGTTGTTGGA
CCTTCAGTTTCTTCACCACCCATAGGGTCGCCTTCTTCACCGCCCATAGG
AGGAGGTAAATCACCACTCGAATCAACCCATCCTGTTTCGGGTAAAAGGA
AGCTGAAAGCAGAAACGAGTTGATAATTCGCTGTCGATGCCATTAAGGTA
ATAAAAAGAATCGTTGATATCTTCATGATTGTGTCTTCCAATTGCGTTTC
TTTAATTTAGAAGTTGGTTTGCCTGGCCGCTACAAATTACTTGTGGAGAA
AGTAAAAACAATAGATGCATGTGATATTGTTTTAAAGCTGTGTGTATTTT
AAAGTCGTCGGTAACGAAAATAACTGTGACGAGGTTTCCAAAGTTGTTCG
TAGTTCAAAACCCTTATAGAATAAAAGTGACTTTACATTGACGATGATGG
TGAAGGTGGTTTAGCCACATTGAAGAACCAATAATATTTGATGTGCTTTT
GGTGGGTTACCGCTCTTTTATTTGATATGCACTTTACCTGTTAT Coding sequence (CDS) from alignment at sc0000673:114737..116130 >TCONS_00028326 ID=TCONS_00028326|Name=TCONS_00028326|organism=Clytia hemisphaerica|type=CDS|length=636bp|location=Sequence derived from alignment at sc0000673:114737..116130 (Clytia hemisphaerica)
TCAATACACTAAACAGAAGATTATGCCAACTAAAGCCAACCCAATATAAA
ATCGAAAGTTTCCCAGCTTCAAATCTGCACCGCTACTCGAATAGCTGCCT
GGCTCATTGGTGTCGTTATCACTGTCCTTTTTTGTGTTCATTCCCAAAGT
CTCCGCTTCATTGTCTGAAGAATCGAGTTTGAAAGTAGATAGGTTTCCGT
CATCTGTACTTAATGTTGGATCATCATCTTCTTCAGAACCACCTCCTCCT
AACAGGCTTTCTTCTCCTGTGGGATTCACCGCCTCAGTGACAGTATCGTT
ATATTTGATCAGGGGCGGTAGGGTGGTTTCTACAGCGGTTGGTAGGGTGG
TTTCTACGACGGGTGGTAAGGTGTTTTCTACAACGGGTGGTAGGGTGGTT
TTTAAAACTGGCGGTATGTTTGGCATTGTAAAATCAAAGGTTTTTGTAGT
CGTTGTTGGACCTTCAGTTTCTTCACCACCCATAGGGTCGCCTTCTTCAC
CGCCCATAGGAGGAGGTAAATCACCACTCGAATCAACCCATCCTGTTTCG
GGTAAAAGGAAGCTGAAAGCAGAAACGAGTTGATAATTCGCTGTCGATGC
CATTAAGGTAATAAAAAGAATCGTTGATATCTTCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028326-exon-sc0000673-1491911889:114737..116130 | TCONS_00028326-exon-sc0000673-1491911889:114737..116130 | Clytia hemisphaerica | exon |
| TCONS_00028326-exon-sc0000673-1510915933:114737..116130 | TCONS_00028326-exon-sc0000673-1510915933:114737..116130 | Clytia hemisphaerica | exon |
| TCONS_00028326-exon-sc0000673-1575043694:114737..116130 | TCONS_00028326-exon-sc0000673-1575043694:114737..116130 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000673 | supercontig | sc0000673:114737..116130 . |
Blast
The following BLAST results are available for this feature:
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