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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028332 ID=TCONS_00028332|Name=TCONS_00028332|organism=Clytia hemisphaerica|type=transcript|length=278bp
AAGAAAATAGTCTACTGTATCTAACATAAAATGACATCGATGGAACACat
taatttcttgaaaaaaggAGACAACCACCTTAACTGCACAGCTGAATCAT
GGTAATCAAGAACTATCAAGAACTACTGAGCAGTGGAGCTGATTCTGGTA
TTTAACCAACCCAGCGAACCACCAAaTGGGAATTGATGAAACTAACGAAA
ACTGAAATCCTACTTTAAATCATATCTATCTGTCTATGCCATTTTGCACT
TTGGATGGAATTTGGAGACAATTCAGAC Run BLAST on NCBI transcript from alignment at sc0000674:135131..137351+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028332 ID=TCONS_00028332|Name=TCONS_00028332|organism=Clytia hemisphaerica|type=transcript|length=2221bp|location=Sequence derived from alignment at sc0000674:135131..137351+ (Clytia hemisphaerica)
AAGAAAATAGTCTACTGTATCTAACATAAAATGACATCGATGGAACACat
taatttcttgaaaaaaggAGGTAAAAACACCCAAAGTGTTAAAGCCCTAA
CTAACGGCTAGTTGATTTGTAGTTGGTTAGTTAGTGGATTTTAATGAACC
CAATTTGGCATTTTACTGGACAGAATTATTTTGTATTTACAAAAGTTCTT
ATttgttatcatttgtttttatttacaatAACCATGTGGTTGAATGAATT
TTGATCGCGGTTAAATGAATTTTGATTGTATTTAGTAATGACTATCTCCA
ATTTTTAGACAACCACCTTAACTGCACAGCTGAATCATGGTAATCAAGAA
CTATCAAGAACTACTGAGCAGTGGAGCTGATTCTGGTATTTAACCAACCC
AGCGAACCACCAAGTAAGTCATTGTATTTCTTTGATAATTATGGTAGCAT
GCTTGGTTTCACCTAGGGACACAACACAACAACACGACACAACGATTTAt
tccaaaatatatttttaatgcACATAAGGTCTTCTACTTTTCTCACAATC
ACATCTCAAAGATcacaaaaattcaatttttgcagCTTATTAATATGCAC
ACATTTCTTTCCAGGACGCTTAGGTAAATTAAGTTTAACtttcaaattgt
tttaaaaatgttgatgacatcagcagaaattgcaaaaatttgattttctg
ccATTTaggacgattggttgaaacgcgggactgttgatatcatAAAGATA
AGTTAAAAAGGGTGCACTAtgaagttatcgtgacatgttatgacataCAG
ACAGAAATTATGATTGATAAaattggtggagttatcaaaacaaatttgtt
gtcaaagagatttaacagtaagtgaaaatacaggccagatatcaacagtc
ccgtgtttcaaccaatcgttcccagttagagcagttgacggtagcttTTT
TATACTGAAAAAGGCTTGTTCATCTCacccataaaaaattttgcctCACA
TTGAAATTGTTTGTTGTACTGTAATTTGGTAAACCTGTGTTAAGCTTTCT
ctcaatgttttttcttctttctgaaaTATCTGGATTATGCATTCTTAAAA
TAATTAAATCCaaccaaaacaataacaaataaAGCTACCAGGTTTAAGTG
ATCacttttgtttacattgatgaATTGACTATAGACATTTTTAAGGACAT
GACGTCATGCTAAATAATTAAAAGCCTAAGCATCACAGCAACAAAAAACA
AAGGCATATTAAGTAacacatatattatatatatttcatTATTGtttcca
gacggtactaatgTGAACGTTCAATTGTGattgaagtaatcaataatgat
cgataataatcgaaggtGGTCAGTGATTTTATCAGTGATCAAATACTCAC
TTGACTCCAGATTATGGCATTATCTTCGACcatttttgatttcatcaaGC
ATCTCGATTACTTTTTGATTACCTtcaatcatattgaataccttctattg
tattgagtactttccagcctttgttttatcaaatatgtttccagtAGCAG
CGCGTCAAAATGAAACCAAGTTTACTTTGGCCACTTAAAACATGCAATTC
ACGCGcaaaaaccactttcgttttctggGACCAATTAGAATGTGCGATAt
gagttacttgaggaaacTGATAAACTAGAACCACCAAATACAAGCAACCT
TGGTaaacaaacccaatgcctaaccgcttgcgccaacgagacacagcaga
aagctgtcattcacaaatacttatagcgtgtgtaatttacagacctttat
taagaaagctcccaagcCTACCGGTACGtacccctacaaggatccctcaC
AGGGTACGGATGTCCCTAACTGATAGAAACccaacccccgtctaggtccg
cagattgaaaaatttcacttgcatcctggtggatgatattgTCTGCCAAC
CGTCTGGATTACTACTTCgataatcaaatttattgattagtaccgtctgg
ttgTTTTGGATCCTAGAGTCAGTGGAGCTTCAttctttaaatttgttttt
catgCTTTCTAGGGTTACACTTAATTTGCAAAACAATTATTCGATAGagt
caattttcttctttccagaTGGGAATTGATGAAACTAACGAAAACTGAAA
TCCTACTTTAAATCATATCTATCTGTCTATGCCATTTTGCACTTTGGATG
GAATTTGGAGACAATTCAGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028332-exon-sc0000674-1491911889:135131..135200 | TCONS_00028332-exon-sc0000674-1491911889:135131..135200 | Clytia hemisphaerica | exon |
| TCONS_00028332-exon-sc0000674-1510915933:135131..135200 | TCONS_00028332-exon-sc0000674-1510915933:135131..135200 | Clytia hemisphaerica | exon |
| TCONS_00028332-exon-sc0000674-1575043694:135131..135200 | TCONS_00028332-exon-sc0000674-1575043694:135131..135200 | Clytia hemisphaerica | exon |
| TCONS_00028332-exon-sc0000674-1491911889:135439..135543 | TCONS_00028332-exon-sc0000674-1491911889:135439..135543 | Clytia hemisphaerica | exon |
| TCONS_00028332-exon-sc0000674-1510915933:135439..135543 | TCONS_00028332-exon-sc0000674-1510915933:135439..135543 | Clytia hemisphaerica | exon |
| TCONS_00028332-exon-sc0000674-1575043694:135439..135543 | TCONS_00028332-exon-sc0000674-1575043694:135439..135543 | Clytia hemisphaerica | exon |
| TCONS_00028332-exon-sc0000674-1491911889:137249..137351 | TCONS_00028332-exon-sc0000674-1491911889:137249..137351 | Clytia hemisphaerica | exon |
| TCONS_00028332-exon-sc0000674-1510915933:137249..137351 | TCONS_00028332-exon-sc0000674-1510915933:137249..137351 | Clytia hemisphaerica | exon |
| TCONS_00028332-exon-sc0000674-1575043694:137249..137351 | TCONS_00028332-exon-sc0000674-1575043694:137249..137351 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000674 | supercontig | sc0000674:135131..137351 + |
Blast
The following BLAST results are available for this feature:
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