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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028355 ID=TCONS_00028355|Name=TCONS_00028355|organism=Clytia hemisphaerica|type=transcript|length=1613bp
TGGAACATCAGAAAAATAATGGTAAACCTTTTCTAAGCGTCAGTACCAAG
ATCTATCCCTAAGTAAAAAGAGTTGGACcttcaaaatgaatttttttcaa
aggggTTATGGCCTGAAAAAACGGTGATATCTCAACAAATACATAAGGCA
TCGCTTTGAAAATTTGCAGGAGTGAAGTaaatatgtcaaatatattatta
tgcaaaaagaaatttgagtttATCACACGACCAATGTAGAGACATTTGAA
AGAGacatatttttcacaaaatcaccaaaaaataaaTTNACGACCAATGT
AGAGACATTTGAAAGAGacatatttttcacaaaatcaccaaaaaataaat
tttgagtttttcaagAGTAAGCTTCATATTAGAGGGTCAAATATGGTTCT
GATATGTTACTGCTAGCAACACTATGAAACCCTTCAAATGTGATATCACA
ACAGAAAGCCTGATTCCAGTTTTAGATAAATACTAAATGCAAATTGAATG
TAAATCCTAACACCCCCTACTCACAAAGAATCGGTGGGATCCCCTCCCAC
TGGAAAAGTTGGCCAAACTGTTATCCCCAGttaaaaaattatacttcaaa
ttttgatacgCTGAAGGTAATagaactgtcgaacgtgctaaccgcactag
CTCAACTTCAAATATTACTTGTAGGCCGAGTtgtaaacatcaacaaaatt
ttgtcgATATATGATAACTTTCTCTAAGTAGACTCCAAAatgttcaaatt
tcttttttgaggTCTCCAGCCTTCCCTaaagtttttagcctcgttATAGC
GAAAAAGTCACAACCACGCCctttaaaatcaatatttttaaaaatgaaaa
ataacagaCCCAGACATTCAAGCAAAGAACAAGTGTGCAGAGTTTCAATC
AAATTGACACATgtgttgcaaaatttcaacctaatcggaatttttttaaa
gacttcaACCTGCCCCTAAGCTTTAGGTGAtatacagacatacatacaaa
cagacattctcagattctataaactgaagttgagaacaagCAAATCCTCA
CCACAAAATATGTGCTctcctggatatccaagctttaaattttagaaaaa
tagagTTTCAATACCTCAATATACAAAGTCTGAAATTgcataaattatca
aaaactagactatgaaaaagttcaaagcttggatatccaggctatatgTG
CTACCTTCTCCACCACAcagaattttctgacttgaaaacagcTCAATTCA
AATCCCCAACCGTAAATAAGTAACAATCCCCTTCCAATTATTTTTTTCCC
CACTGGCTAAAATATTCCTATCttgtctgtgagaagagggtgtgaCCCTA
TGCCTCTCTTACCTTATAAAGAGACGCTAAGGGCCAAAAACCTAaaacaa
aacacagaaaaacaaaaagaagccAAAACTCACCGGCTGGCCTAAAAATA
TGTGCTGTGAAATGTGTCATGCCACTGATATACAATGTGATTGGAAAAAA
CTTAAAGTTCAATTGACTAAATTCCAAATTtgtaaaattagaaaatcata
ACTTTTTCAATTTGACTTTCCTCTCCATATACAACATCCTTCTCATAAGA
TGACATGTTAAAA Run BLAST on NCBI transcript from alignment at sc0000674:184073..185685 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028355 ID=TCONS_00028355|Name=TCONS_00028355|organism=Clytia hemisphaerica|type=transcript|length=1613bp|location=Sequence derived from alignment at sc0000674:184073..185685 (Clytia hemisphaerica)
TTTTAACATGTCATCTTATGAGAAGGATGTTGTATATGGAGAGGAAAGTC
AAATTGAAAAAGTtatgattttctaattttacaAATTTGGAATTTAGTCA
ATTGAACTTTAAGTTTTTTCCAATCACATTGTATATCAGTGGCATGACAC
ATTTCACAGCACATATTTTTAGGCCAGCCGGTGAGTTTTggcttcttttt
gtttttctgtgttttgtttTAGGTTTTTGGCCCTTAGCGTCTCTTTATAA
GGTAAGAGAGGCATAGGGtcacaccctcttctcacagacaaGATAGGAAT
ATTTTAGCCAGTGGGGAAAAAAATAATTGGAAGGGGATTGTTACTTATTT
ACGGTTGGGGATTTGAATTGAgctgttttcaagtcagaaaattctgTGTG
GTGGAGAAGGTAGCAcatatagcctggatatccaagctttgaactttttc
atagtctagtttttgataatttatgcAATTTCAGACTTTGTATATTGAGG
TATTGAAActctatttttctaaaatttaaagcttggatatccaggagAGC
ACATATTTTGTGGTGAGGATTTGcttgttctcaacttcagtttatagaat
ctgagaatgtctgtttgtatgtatgtctgtataTCACCTAAAGCTTAGGG
GCAGGTtgaagtctttaaaaaaattccgattaggttgaaattttgcaaca
cATGTGTCAATTTGATTGAAACTCTGCACACTTGTTCTTTGCTTGAATGT
CTGGGtctgttatttttcatttttaaaaatattgattttaaagGGCGTGG
TTGTGACTTTTTCGCTATaacgaggctaaaaactttAGGGAAGGCTGGAG
AcctcaaaaaagaaatttgaacatTTTGGAGTCTACTTAGAGAAAGTTAT
CATATATcgacaaaattttgttgatgtttacaACTCGGCCTACAAGTAAT
ATTTGAAGTTGAGctagtgcggttagcacgttcgacagttctATTACCTT
CAGcgtatcaaaatttgaagtataattttttaaCTGGGGATAACAGTTTG
GCCAACTTTTCCAGTGGGAGGGGATCCCACCGATTCTTTGTGAGTAGGGG
GTGTTAGGATTTACATTCAATTTGCATTTAGTATTTATCTAAAACTGGAA
TCAGGCTTTCTGTTGTGATATCACATTTGAAGGGTTTCATAGTGTTGCTA
GCAGTAACATATCAGAACCATATTTGACCCTCTAATATGAAGCTTACTct
tgaaaaactcaaaatttattttttggtgattttgtgaaaaatatgtCTCT
TTCAAATGTCTCTACATTGGTCGTNAAtttattttttggtgattttgtga
aaaatatgtCTCTTTCAAATGTCTCTACATTGGTCGTGTGATaaactcaa
atttctttttgcataataatatatttgacatatttACTTCACTCCTGCAA
ATTTTCAAAGCGATGCCTTATGTATTTGTTGAGATATCACCGTTTTTTCA
GGCCATAAcccctttgaaaaaaattcattttgaagGTCCAACTCTTTTTA
CTTAGGGATAGATCTTGGTACTGACGCTTAGAAAAGGTTTACCATTATTT
TTCTGATGTTCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028355-exon-sc0000674-1491911889:184073..185685 | TCONS_00028355-exon-sc0000674-1491911889:184073..185685 | Clytia hemisphaerica | exon |
| TCONS_00028355-exon-sc0000674-1510915933:184073..185685 | TCONS_00028355-exon-sc0000674-1510915933:184073..185685 | Clytia hemisphaerica | exon |
| TCONS_00028355-exon-sc0000674-1575043694:184073..185685 | TCONS_00028355-exon-sc0000674-1575043694:184073..185685 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000674 | supercontig | sc0000674:184073..185685 . |
Blast
The following BLAST results are available for this feature:
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