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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028397 ID=TCONS_00028397|Name=TCONS_00028397|organism=Clytia hemisphaerica|type=transcript|length=1528bp
cccccccccccccgggttaatAATGTGATTTGGTGGCTGACAAAAGTCTT
TTTTAAAGGGAATTAAATTTGGTGATATTTTGTTTGGGGGATCCTTTTTT
GAAACTAGAACAGCTATGTTTAGGGAATGTTGAAATGATGGTGGATGGTG
GAAGAAACAAATCCTGGGGGAAACTTGATTTGACAGATTTTGGGTGAAAC
TGCTtattcttcctttaaggtaatcaAATATTATTCAAATCTGAAACTCG
TTTAAATTTTGGGTTATTTTATGATTACGATTTGGAGCCAAATCACGTTC
AACCAAAGTCATTTGGAATGATAAATTATTAGTGCTTGTCGCCTGATGAT
AACTTTGATGATGTATATTCCCTTTTTGCTCACAgataaaaactttgttt
tgcTGTGGTTTGATAAGTAACGGTTGGTGTTGCTGGTGTTGATGCTGACT
GTAATATAGACCTCCATGCATTTGGTTTTGATGATGATGCTGGTTGGGAT
TTTCGTAagaatgatattttttattgaaatcaaATTCTTTATCCAGCAAG
TCCAAATGATTCGATAAATCCATGATAATCTCCATGTTGTCATAGTTGTC
ATTTTTCATCACTTCTTTCACATATTCTAAAGAATCCGATATCTTCTTTA
AGGCCGTTGAGAATTTATCAAATGATTGGAAATTACTCTCCTTTTTAATT
TGGTCAACCAATTGCTTTTCTCTCTTAGCTACTTCTTTTCTAATTTCGAC
AAAAACCTTCTTGACCAACAAGACAGATTTATCTTCGGCAGCCTCAactc
tttttttaaaattttcaccttCTTTGTGAGTATTGAGCAAATTTTGTTTA
CATTCCAGGCCTTTTAACAGCTtttgtttcaattctttttttgctttctc
TTTAGCCTCGGTGATAAGTGACATGGAATGTTGTTTATGTTGATTGCTAA
TCATGCAGTCATTACAAACAACCACCTTACAATTCTCACAAAAATATTTG
AGTAGCTCTTTATGTTTGGCGCAGTATCGAACTTGGTTGACAGATTCCTG
TGAGACGGACGAAACTGCGACAATACAATGGCCAACAAAGCGAACACATC
TTTGATGATAATTTGTACAATCTTTACATAAATTGAGAACACAATTTTTG
CAATGGTTTGTGGCAGGTATTCCATTAGCACAGTCATGACAACATGGTTG
ATTTCCTCTTGCAGATGTTTTCAGCTTTTCGATGATGTTTTGAGCAATAT
AATTGGTAGATAGCCCTGATACACCATTTGGAACCTGCATATCAATTAAA
AGTTGATTTAAATATTATTCCCTTATGTAGTCTTAAATCCCCTAATAAAG
GTGCGGATACAAGCTTAAttgtaaaagaattttttttctctgtaaATTAG
ATCCTGATTTACACTGAAGGTAAATGTTAGGAAAAATAGCATGTTAGGCC
TTTTCAGGCTTGTAAATAATtccaaatcttattttttcacttgttgtact
aaattttacaagctatataaagaaaaaa Run BLAST on NCBI transcript from alignment at sc0000676:131944..133471+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028397 ID=TCONS_00028397|Name=TCONS_00028397|organism=Clytia hemisphaerica|type=transcript|length=1528bp|location=Sequence derived from alignment at sc0000676:131944..133471+ (Clytia hemisphaerica)
cccccccccccccgggttaatAATGTGATTTGGTGGCTGACAAAAGTCTT
TTTTAAAGGGAATTAAATTTGGTGATATTTTGTTTGGGGGATCCTTTTTT
GAAACTAGAACAGCTATGTTTAGGGAATGTTGAAATGATGGTGGATGGTG
GAAGAAACAAATCCTGGGGGAAACTTGATTTGACAGATTTTGGGTGAAAC
TGCTtattcttcctttaaggtaatcaAATATTATTCAAATCTGAAACTCG
TTTAAATTTTGGGTTATTTTATGATTACGATTTGGAGCCAAATCACGTTC
AACCAAAGTCATTTGGAATGATAAATTATTAGTGCTTGTCGCCTGATGAT
AACTTTGATGATGTATATTCCCTTTTTGCTCACAgataaaaactttgttt
tgcTGTGGTTTGATAAGTAACGGTTGGTGTTGCTGGTGTTGATGCTGACT
GTAATATAGACCTCCATGCATTTGGTTTTGATGATGATGCTGGTTGGGAT
TTTCGTAagaatgatattttttattgaaatcaaATTCTTTATCCAGCAAG
TCCAAATGATTCGATAAATCCATGATAATCTCCATGTTGTCATAGTTGTC
ATTTTTCATCACTTCTTTCACATATTCTAAAGAATCCGATATCTTCTTTA
AGGCCGTTGAGAATTTATCAAATGATTGGAAATTACTCTCCTTTTTAATT
TGGTCAACCAATTGCTTTTCTCTCTTAGCTACTTCTTTTCTAATTTCGAC
AAAAACCTTCTTGACCAACAAGACAGATTTATCTTCGGCAGCCTCAactc
tttttttaaaattttcaccttCTTTGTGAGTATTGAGCAAATTTTGTTTA
CATTCCAGGCCTTTTAACAGCTtttgtttcaattctttttttgctttctc
TTTAGCCTCGGTGATAAGTGACATGGAATGTTGTTTATGTTGATTGCTAA
TCATGCAGTCATTACAAACAACCACCTTACAATTCTCACAAAAATATTTG
AGTAGCTCTTTATGTTTGGCGCAGTATCGAACTTGGTTGACAGATTCCTG
TGAGACGGACGAAACTGCGACAATACAATGGCCAACAAAGCGAACACATC
TTTGATGATAATTTGTACAATCTTTACATAAATTGAGAACACAATTTTTG
CAATGGTTTGTGGCAGGTATTCCATTAGCACAGTCATGACAACATGGTTG
ATTTCCTCTTGCAGATGTTTTCAGCTTTTCGATGATGTTTTGAGCAATAT
AATTGGTAGATAGCCCTGATACACCATTTGGAACCTGCATATCAATTAAA
AGTTGATTTAAATATTATTCCCTTATGTAGTCTTAAATCCCCTAATAAAG
GTGCGGATACAAGCTTAAttgtaaaagaattttttttctctgtaaATTAG
ATCCTGATTTACACTGAAGGTAAATGTTAGGAAAAATAGCATGTTAGGCC
TTTTCAGGCTTGTAAATAATtccaaatcttattttttcacttgttgtact
aaattttacaagctatataaagaaaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028397-exon-sc0000676-1491911889:131944..133471 | TCONS_00028397-exon-sc0000676-1491911889:131944..133471 | Clytia hemisphaerica | exon |
| TCONS_00028397-exon-sc0000676-1510915933:131944..133471 | TCONS_00028397-exon-sc0000676-1510915933:131944..133471 | Clytia hemisphaerica | exon |
| TCONS_00028397-exon-sc0000676-1575043694:131944..133471 | TCONS_00028397-exon-sc0000676-1575043694:131944..133471 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000676 | supercontig | sc0000676:131944..133471 + |
Blast
The following BLAST results are available for this feature:
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