TCONS_00028581 (transcript) - C. hemisphaerica

Overview
NameTCONS_00028581
Unique NameTCONS_00028581
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length975

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00028581 ID=TCONS_00028581|Name=TCONS_00028581|organism=Clytia hemisphaerica|type=transcript|length=975bp
CAATTGATGAGAGAAGTCCAGAAAAATAAACAGTTACAACAAGACCTTCG
GAATGTCGATGATATACACCGCAATcttgaaaatgtcaaatttcaactTA
ACCAGCACCAGAAGCTTTTCAAAAGTTTGGCAATCGAACTTTTCGAAGAA
TGCACAAAAATGTCGGTCATCAAAGGCTCATCACCGAAGTCACCAAAGTT
AACTTGTTCATCTTCACCAGGGGACAAAGAACAGACGAATAtcttggtga
atgcaatgAAAACCTTCAAGGAAAACTTCGATGACTTTAGATCGTACACT
ATATCCatccaagaaaaattgaagACGCAATCTTCCCTGGAGCTTTCACA
ATCACCTTCCGCCAACAATTCATCACCTACAACCTCCATTTCAAACAAAT
TATTACGTCATCTACAGAATCGTGTACAACAATTACGTCAAGAAAATATT
CAATTGAAAGAGAATTTAAAGAACTCCTCGTTAACGGTCTTCGATACAAG
TGATATAACGAGGCGAGTAGAAGATTTGGAATGTCAACTTCAGGACAAGG
AAGTTAAGATGAATGAGCAGCAAGCATTATTAGAATCGAAAATGTTGGAA
GTGTTGACGCTACAACACGCTCTCAAACAGTCAACAAAGGAGCGTCTTCG
CCACGAGAAACAATATGCAGACACAATGGCCATCAACCATACAGATCAAA
GCCCGAACACGCTTTCTCATCATTTAAACGGTAATGACTTGACCTCTGAA
ATCTCTTGACGTGCGGCGGGAGGGAGGTAGACGTTATTTTTGTAGCTATG
TCTTGTTCTTTACTCGGTCTTAAAACTAGTGTGGTGGAAAAACTTGATAT
GAAACTTACCTCCTTCGATCCatgctttttgttttttccaaTATAAAGCT
ATTTAGTATCATTGAGATGGTAGTAACAATATTCGAGCTTCTTGTTAGTA
TGTTTTGAAACGAAAAAGTGTCCGG
Run BLAST on NCBI

protein sequence of TCONS_00028581-protein

>TCONS_00028581-protein ID=TCONS_00028581-protein|Name=TCONS_00028581-protein|organism=Clytia hemisphaerica|type=polypeptide|length=252bp
QLMREVQKNKQLQQDLRNVDDIHRNLENVKFQLNQHQKLFKSLAIELFEE
CTKMSVIKGSSPKSPKLTCSSSPGDKEQTNILVNAMKTFKENFDDFRSYT
ISIQEKLKTQSSLELSQSPSANNSSPTTSISNKLLRHLQNRVQQLRQENI
QLKENLKNSSLTVFDTSDITRRVEDLECQLQDKEVKMNEQQALLESKMLE
VLTLQHALKQSTKERLRHEKQYADTMAINHTDQSPNTLSHHLNGNDLTSE
IS
Run BLAST on NCBI

transcript from alignment at sc0000692:16440..25163+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00028581 ID=TCONS_00028581|Name=TCONS_00028581|organism=Clytia hemisphaerica|type=transcript|length=8724bp|location=Sequence derived from alignment at sc0000692:16440..25163+ (Clytia hemisphaerica)
CAATTGATGAGAGAAGTCCAGAAAAATAAACAGTTACAACAAGACCTTCG
GAATGTCGATGATATACACCGCAATcttgaaaatgtcaaatttcaactTA
ACCAGgttatacacttttttataaggatagCGTTTATTAGTATACTGAGA
CTTGAATTAGCAAAAAAGAAGCATAATTCTAAGCATAGCACGAAACTGGG
AAAAATACattattcaaattttgttttgaaaatgggaTGAATGATCAATG
AGACAGAAATGTAGACAGCGAATATTTTGACACATTGAACAAGTGATCGT
TAATATAAAGCGCTGTAAAGCGTAAAAGTATGAACAATTATCGTGTTTGG
GCCACTGAGACAGGGTAGTTGACAACGAATAATTTGACTTAATTGTCACT
TTGAAACAAGGATCTGTAAAACATAAATAATATGAACAATTATCGTTTTG
ACAAGCTGAAgtaaaagtgaaaatgaaaatcaaccaaaattgacgatgtt
ttgaaaaaactttcataagcATTTGCTGAAAAAGAAGTTTTGCTAAGTAT
GATGAGCCTCAGCACGAATTTTCCGTATGCTTATAGAGCAAAATTAGTAT
TGATTCTAGAATCTGCTAAGTTGAAGttcaatcatggacaaaaggttgta
gacaaatgaaatttcagtaaaaaaatgatgagaaatagtgtaaaatgact
cttcaatgtgtctgaaaggggaggaaagttaagaaaaacacttttgaagt
cgttgcattgcttttcaattgcttttgagagaaccacaagcaaaaaatca
gcgttttgatactggtgtaagccagttaattaaaaaccttttgtccatgg
tTGTTGTATGGATTCTGTTCGAGATTCGGCCATTACTCTTCCGTGCTTGG
Gggtataggggggggggggggggagagaggggggggggggggggtgcggg
gggggggggggggagagaggggggggggggggggtgcggggggggggggg
gggagagaggggggggggggggggtgcggggggggggggggggagagagg
ggggggggggggggtgcggggggggggggggggagagagggggggggggg
gggaacttttaaataaaaacggGGTGTCATAATTACGTGATATTGAATTG
ATTTTAGTGAATTTCCCTAGGAAGATGAAggtttttgatactttttttgg
CAAGTCATTAAAGTCATTAAAATGGTGTCATTATAAAGTGTTTTTGGgtt
gaaaaaatagaaaaaattaaaattaacacccccctacaattaagcacaga
agaggACGTTTTCTGATCTTTTTGAAGCACAGTAATTTGaatatttgatt
gattttaatTGAAGTCATTTTCAATCGATTTGCTATAAAATCATTATCTA
TAGTACACCTTTTTTTTAGAAGAACAAtttaataagaacaatgagACTCA
AAATCACCaacaaataagaacaatttaagaaccgatcctgaaattactca
attttaagcaatttaggggtcaaattagtaaaataacgcctaaaatacct
caattacatcCTATGAATAAGAACAGGATGAGAACAATCTGAGgctcaaa
atgccaaaaaagtaagaacagccgagcctcagaaaaattttactggttct
tataaaaaaagtgtaagtcACATAGACTGACAAACTTCTTTTTGCGCTAC
ATTTTCAGCACCAGAAGCTTTTCAAAAGTTTGGCAATCGAACTTTTCGAA
GAATGCACAAAAATGTCGGTCATCAAAGGCTCATCACCGAAGTCACCAAA
GTAAGTATCTCAATATGATTTTATTTGTCTCTTTTATCGTGGAAGTAACC
TCAGATACATGCTCAAACTTTCACTCGCCTTCAAACTGAATAAACGGaac
ccaaaaatctaaattcatcatcaaaatttctcaaatataaatgtgaaaaa
gttcATAGAATCTcttccaactatcttctttcaggagattaaAAATAGTT
GGtcagaaattcttatttttttacgtGTGCAATCTTTAATAATCGATCCA
AAGATTCGTTTTTCGTTAGGTACCTACCTGTAGGTAGAGGAGCGTGTCGC
TCTTCCTTTATGTGTTAATTGTTGacgtttctttttttaagaaaggtaCG
CGATATTCCTTTTCGTTTCACAGGTTAACTTGTTCATCTTCACCAGGGGA
CAAAGAACAGACGAATAtcttggtgaatgcaatggtaaCTTCTATTTCTC
TCTTTCTTTCTCTTCTCTCTCTTTTACCGTGGCTGATATGGGCATCCCTG
CGCCTATCTTGCCGCGGCGGTGTaagttaggcggccgcctaacttAGCGA
TGGATTAACTCGGGCGGCCGCCCAACCTAACTTAGGCGTCCGCCTAATTA
GTCAATCTTGCTGATCTATTCTGGTCTGTATTTTTATCATATCAATTCAG
GCGGCCACCAGTTTTATCATTTCAAATTTCAAAACAAACAAAAAATATGG
TAGCCATTTTCCTTTTGCTTGCTTTTGAAATTCCTCTGCAACTTGATACa
ccattttggtatttttgtttactttattaACACGTGCAACAGAAGATAGG
TGGCCAACTCAGGTGGCCGCCtaagatttaacaagttaggCGGCCGCCTG
AATTAGAATAGGCGGCCGCCTATATCAACTCAAGCGGCCGCCtaagattt
aacaagttaggcggccgcctaagaTTCAAATATAAAATGTAGACCAGAAA
GCTAATTTGATGACCATCCATCGATaagttaggcggccgcctaagaTGAC
AGGCGGCCGTCTGACTTGAACCGCCGCGGCAAGATAGGCGCACGGTACTC
TTTCGATAGAATATTTTACGCTTGGTCTGTAAGCTTAACGGAAGACTGAA
TTTTGCTAGCACTAATTCAAACTGTCGACTTTTTTGTCTTACTTCCGTTG
GGTGTGAAAGACtgttgaaaattgactgaaaaTTGATATCGATGTAACTA
ATTAATCGATGTAAGCCTTTCTCTTGTTTCAGAAAACCTTCAAGGAAAAC
TTCGATGACTTTAGATCGTACACTATATCCatccaagaaaaattgaaggT
AAATGAAATTCTTCAAGTCCCTCCCAAAGCTTTGTCCCAAAAAATATTAT
AGCtgcaaaaaatcgcaatgaGATAACATTTATGAGAAGATTTTTATGcg
tcattcattcattcatttctgCCAAGTCAATGAGACAGGGATGATATATT
GTTCATTGTATCCTTTATTTTTAGACGCAATCTTCCCTGGAGCTTTCACA
ATCACCTTCCGCCAACAATTCATCACCTACAACCTCCATTTCAAACAAAT
TATTACGTCATCTACAGAATCGTGTACAACAATTACGTCAAGAAAATATT
CAATTGAAAGAGAATTTAAAGAACTCCTCGTTAACGGTAAGTCATTTGAC
GTTATCTATTGCCCATTTTTCATGATATGGTGTTTTAAGATGTTTTTTCg
tggatatttttttcgaagGAACCTGCTTCGAATGTCAGTTGAAACCTATC
TTCTCTCGATGAAAAGATGTGTCTTTCCGAACTTTAACCTGAATGTATTT
TCCAACTCCGTTGCTATCATCCGTCATCTCCGTTTATTCTCATAAAGTTA
CTGTAAAGACAGGGATTTAAAACTGCCCGTACATTGTTCCCTGGACAATG
ACTTTGATACAACACGTGTGAAAATGTGTTAACAAATCCTTTTTTGTCTC
AAATAGTACTGAGTTTATGAATGTGTGTTATTCTTCTACGGAAATGGTTA
GCTTTTGCTAAAGTTTTGgttttccaaatcgctttagcTCAGACACTTTA
CTGTCCTTAAAAGTGCAAATGCATAAACTCACTATTGCGAAAAAGATAGT
GTCCTTTTAGCTCATTCTTCTTGTAAGTTTGAGGATTTTGCCTGTTAAGA
TCTTTTCTTCGATGCGATTGTACTCAAATATTACTTTCTCGTTAAAGATC
AGCATTCTGGTTTCAATTGATTATTTATCAAAATACTTAAACTGATCTTT
AGGTCTTCGATACAAGTGATATAACGAGGCGAGTAGAAGATTTGGAATGT
CAACTTCAGGTAAGAATTATAACCGTCAAATATCACGATTGGTCACGTGG
AAATAGTTCTTCTTTTTATTAGGGCAATTAGTTATGACTACCAAGAAGCA
AAAGAGCTCAACCGACTGTTGAGAAAATCTAGTTTAAGATCCCAGAATTT
CctgatttcaaagccccgaaaGGTCTATATTTGAAACTCTTGTATAGTAA
ATGAGGCCACTAATTAAATAGTTCTTCTTTTATTGCTGGGCATTTTGCAt
gcagtctgttcctctaaaggatcctgcattgtaaTACGCTCGCATGCGTA
TTTTGTTGTTCTTTTAGACcgcatgtagttaattcccgtgataaacgaaG
GGGaatggtacagtcactttcggtcggggttgtggatggcgNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
tattccaaatcgctttagcTCAGACACTTTACTGTCCTTAAAAGTGCAAA
TGCATAAACTCACTATTGCGAAAAAGATAGTGTCCTTTTAGCTCATTCTT
CTTGTAAGTTTGAGGATTTTGCCTGTTAAGATCTTTTCTTCGATGCGATT
GTACTCAAATATTACTTTCTCGTTAAAGATCAGCATTCTAGTTTCAATTG
ATTATTTATCAAAATACTTAAACTGATCTTTAGGTCTTCGATACAAGTGA
TATAACGAGGCGAGTAGAAGATTTGGAATGTCAACTTCAGGTAAGAATTA
TAACCGTCAAATATCACGATTGGTCACGTGGAAATAGTTCTTCTTTTTAT
TAGGGCAATTAGTTATGACTACCAAGAAGCAAAAGAGCTCAACCGACTGT
TGAGAAAATCTAGTTTAAGATCCCAGAATTTCctgatttcaaagccccga
aaGGTCTATATTTGAAACTCTTGTTTGAGGCCACTAATTAAATAGTTCTT
CTTTTATTGCTGGGCATTTTGCAtgcagtctgttcctctaaaggatcctg
cattgtaatacgcatgcgtaatttgttgttcttttagaccacatgtagtt
aattcccgtgataaatgAAGGGGaatggtacagtcactttcggtcggggt
tgtcgatggcgaaatatgtcgttttttatgagatttttcgttctttttgt
ctatttttagtaatgcaggattctttagataaatgGTTCGCCCTGACTGT
TGAGAAGATGTAGTTTCGTCTCCCAAGagttttcagaaaagataatcaat
tttaaaCTCCATCTAGGCAGAGAAATGTAAAGGGATAGAAAAATAACTTC
TCTGATTACCAAAAGTGATCGTTTCTGCCCCCATGATGTATTTTAGAACG
TCAAACGTTGACCCTATGGTAATTTTACGATGTTTCCCTCAGGATTGTAG
TTGATTGCGACTAAAAATAATGTTGTTTTTCTCTCAGGACAAGGAAGTTA
AGATGAATGAGCAGCAAGCATTATTAGAATCGAAAATGTTGGAAGTGTTG
ACGCTACAACACGCTCTCAAACAGTCAACAAAGGTAATGACAATCAGTTA
TTTTCCATTAttaatacacgcttttctttataaaaatggtataaatccat
ttcattatggatattcttaacttttttgggaaaatacaTCATTCTTAGCG
GGAAATATTCCCGGAACGGGAAAGTGGAAAACTTCCCGAAACGGCTAGAT
TTTCCTAATCAGGAAGATCGGATGTTTCCTGGTCGGAAAAGTTGGCTTTG
AGCACCCCGGAAATGGTAGTGAAAAATAAATAGCTGACTTCTCTTGTAAA
GGAGGGAAAATAAATAACATTCATCTTCCTGATTTGACTTCTCGAATGGA
GCACTAAAAATCGGTGGAAAATTCAAGATTGCAGCCataaaaattgatca
aattagGAAGTTGTGTCCTTTTCAGGCAACACTACCTCCCCGTAAGGGAA
ATATTTCCCATTTGGGCGATACTTTTCATATCgatatactcttaggttcc
aaataaacgaccCCCCCNCCCCCCccctggaccttattaggacctgccat
ttattaatttttaagaatatgttcagcaggccccttattttgctctaaaa
agCCTGTTTTTAGCCTgcatttaccttatttttgggttttcagaagtaca
atttccacctcccccgtttatttggagtAGTGTTACCGACTGTATGTTAT
GGCTCAAAATAATGTCATTTATCATTCCACTTTTCTAGGAGCGTCTTCGC
CACGAGAAACAATATGCAGACACAATGGCCATCAACCATACAGATCAAAG
CCCGAACACGCTTTCTCATCATTTAAACGGTAATGACTTGACCTCTGAAA
TCTCTTGACGTGCGGCGGGAGGGAGGTAGACGTTATTTTTGTAGCTATGT
CTTGTTCTTTACTCGGTCTTAAAACTAGTGTGGTGGAAAAACTTGATATG
AAACTTACCTCCTTCGATCCatgctttttgttttttccaaTATAAAGCTA
TTTAGTATCATTGAGATGGTAGTAACAATATTCGAGCTTCTTGTTAGTAT
GTTTTGAAACGAAAAAGTGTCCGG

Coding sequence (CDS) from alignment at sc0000692:16440..25163+

>TCONS_00028581 ID=TCONS_00028581|Name=TCONS_00028581|organism=Clytia hemisphaerica|type=CDS|length=6072bp|location=Sequence derived from alignment at sc0000692:16440..25163+ (Clytia hemisphaerica)
CAATTGATGAGAGAAGTCCAGAAAAATAAACAGTTACAACAAGACCTTCG
GAATGTCGATGATATACACCGCAATcttgaaaatgtcaaatttcaactTA
ACCAGCACCAGAAGCTTTTCAAAAGTTTGGCAATCGAACTTTTCGAAGAA
TGCACAAAAATGTCGGTCATCAAAGGCTCATCACCGAAGTCACCAAAGTT
AACTTGTTCATCTTCACCAGGGGACAAAGAACAGACGAATAtcttggtga
atgcaatgAAAACCTTCAAGGAAAACTTCGATGACTTTAGATCGTACACT
ATATCCatccaagaaaaattgaagACGCAATCTTCCCTGGAGCTTTCACA
ATCACCTTCCGCCAACAATTCATCACCTACAACCTCCATTTCAAACAAAT
TATTACGTCATCTACAGAATCGTGTACAACAATTACGTCAAGAAAATATT
CAATTGAAAGAGAATTTAAAGAACTCCTCGTTAACGGTCTTCGATACAAG
TGATATAACGAGGCGAGTAGAAGATTTGGAATGTCAACTTCAGGACAAGG
AAGTTAAGATGAATGAGCAGCAAGCATTATTAGAATCGAAAATGTTGGAA
GTGTTGACGCTACAACACGCTCTCAAACAGTCAACAAAGGAGCGTCTTCG
CCACGAGAAACAATATGCAGACACAATGGCCATCAACCATACAGATCAAA
GCCCGAACACGCTTTCTCATCATTTAAACGGTAATGACTTGACCTCTGAA
ATCTCTTGACAATTGATGAGAGAAGTCCAGAAAAATAAACAGTTACAACA
AGACCTTCGGAATGTCGATGATATACACCGCAATcttgaaaatgtcaaat
ttcaactTAACCAGCACCAGAAGCTTTTCAAAAGTTTGGCAATCGAACTT
TTCGAAGAATGCACAAAAATGTCGGTCATCAAAGGCTCATCACCGAAGTC
ACCAAAGTTAACTTGTTCATCTTCACCAGGGGACAAAGAACAGACGAATA
tcttggtgaatgcaatgAAAACCTTCAAGGAAAACTTCGATGACTTTAGA
TCGTACACTATATCCatccaagaaaaattgaagACGCAATCTTCCCTGGA
GCTTTCACAATCACCTTCCGCCAACAATTCATCACCTACAACCTCCATTT
CAAACAAATTATTACGTCATCTACAGAATCGTGTACAACAATTACGTCAA
GAAAATATTCAATTGAAAGAGAATTTAAAGAACTCCTCGTTAACGGTCTT
CGATACAAGTGATATAACGAGGCGAGTAGAAGATTTGGAATGTCAACTTC
AGGACAAGGAAGTTAAGATGAATGAGCAGCAAGCATTATTAGAATCGAAA
ATGTTGGAAGTGTTGACGCTACAACACGCTCTCAAACAGTCAACAAAGGA
GCGTCTTCGCCACGAGAAACAATATGCAGACACAATGGCCATCAACCATA
CAGATCAAAGCCCGAACACGCTTTCTCATCATTTAAACGGTAATGACTTG
ACCTCTGAAATCTCTTGACAATTGATGAGAGAAGTCCAGAAAAATAAACA
GTTACAACAAGACCTTCGGAATGTCGATGATATACACCGCAATcttgaaa
atgtcaaatttcaactTAACCAGCACCAGAAGCTTTTCAAAAGTTTGGCA
ATCGAACTTTTCGAAGAATGCACAAAAATGTCGGTCATCAAAGGCTCATC
ACCGAAGTCACCAAAGTTAACTTGTTCATCTTCACCAGGGGACAAAGAAC
AGACGAATAtcttggtgaatgcaatgAAAACCTTCAAGGAAAACTTCGAT
GACTTTAGATCGTACACTATATCCatccaagaaaaattgaagACGCAATC
TTCCCTGGAGCTTTCACAATCACCTTCCGCCAACAATTCATCACCTACAA
CCTCCATTTCAAACAAATTATTACGTCATCTACAGAATCGTGTACAACAA
TTACGTCAAGAAAATATTCAATTGAAAGAGAATTTAAAGAACTCCTCGTT
AACGGTCTTCGATACAAGTGATATAACGAGGCGAGTAGAAGATTTGGAAT
GTCAACTTCAGGACAAGGAAGTTAAGATGAATGAGCAGCAAGCATTATTA
GAATCGAAAATGTTGGAAGTGTTGACGCTACAACACGCTCTCAAACAGTC
AACAAAGGAGCGTCTTCGCCACGAGAAACAATATGCAGACACAATGGCCA
TCAACCATACAGATCAAAGCCCGAACACGCTTTCTCATCATTTAAACGGT
AATGACTTGACCTCTGAAATCTCTTGACAATTGATGAGAGAAGTCCAGAA
AAATAAACAGTTACAACAAGACCTTCGGAATGTCGATGATATACACCGCA
ATcttgaaaatgtcaaatttcaactTAACCAGCACCAGAAGCTTTTCAAA
AGTTTGGCAATCGAACTTTTCGAAGAATGCACAAAAATGTCGGTCATCAA
AGGCTCATCACCGAAGTCACCAAAGTTAACTTGTTCATCTTCACCAGGGG
ACAAAGAACAGACGAATAtcttggtgaatgcaatgAAAACCTTCAAGGAA
AACTTCGATGACTTTAGATCGTACACTATATCCatccaagaaaaattgaa
gACGCAATCTTCCCTGGAGCTTTCACAATCACCTTCCGCCAACAATTCAT
CACCTACAACCTCCATTTCAAACAAATTATTACGTCATCTACAGAATCGT
GTACAACAATTACGTCAAGAAAATATTCAATTGAAAGAGAATTTAAAGAA
CTCCTCGTTAACGGTCTTCGATACAAGTGATATAACGAGGCGAGTAGAAG
ATTTGGAATGTCAACTTCAGGACAAGGAAGTTAAGATGAATGAGCAGCAA
GCATTATTAGAATCGAAAATGTTGGAAGTGTTGACGCTACAACACGCTCT
CAAACAGTCAACAAAGGAGCGTCTTCGCCACGAGAAACAATATGCAGACA
CAATGGCCATCAACCATACAGATCAAAGCCCGAACACGCTTTCTCATCAT
TTAAACGGTAATGACTTGACCTCTGAAATCTCTTGACAATTGATGAGAGA
AGTCCAGAAAAATAAACAGTTACAACAAGACCTTCGGAATGTCGATGATA
TACACCGCAATcttgaaaatgtcaaatttcaactTAACCAGCACCAGAAG
CTTTTCAAAAGTTTGGCAATCGAACTTTTCGAAGAATGCACAAAAATGTC
GGTCATCAAAGGCTCATCACCGAAGTCACCAAAGTTAACTTGTTCATCTT
CACCAGGGGACAAAGAACAGACGAATAtcttggtgaatgcaatgAAAACC
TTCAAGGAAAACTTCGATGACTTTAGATCGTACACTATATCCatccaaga
aaaattgaagACGCAATCTTCCCTGGAGCTTTCACAATCACCTTCCGCCA
ACAATTCATCACCTACAACCTCCATTTCAAACAAATTATTACGTCATCTA
CAGAATCGTGTACAACAATTACGTCAAGAAAATATTCAATTGAAAGAGAA
TTTAAAGAACTCCTCGTTAACGGTCTTCGATACAAGTGATATAACGAGGC
GAGTAGAAGATTTGGAATGTCAACTTCAGGACAAGGAAGTTAAGATGAAT
GAGCAGCAAGCATTATTAGAATCGAAAATGTTGGAAGTGTTGACGCTACA
ACACGCTCTCAAACAGTCAACAAAGGAGCGTCTTCGCCACGAGAAACAAT
ATGCAGACACAATGGCCATCAACCATACAGATCAAAGCCCGAACACGCTT
TCTCATCATTTAAACGGTAATGACTTGACCTCTGAAATCTCTTGACAATT
GATGAGAGAAGTCCAGAAAAATAAACAGTTACAACAAGACCTTCGGAATG
TCGATGATATACACCGCAATcttgaaaatgtcaaatttcaactTAACCAG
CACCAGAAGCTTTTCAAAAGTTTGGCAATCGAACTTTTCGAAGAATGCAC
AAAAATGTCGGTCATCAAAGGCTCATCACCGAAGTCACCAAAGTTAACTT
GTTCATCTTCACCAGGGGACAAAGAACAGACGAATAtcttggtgaatgca
atgAAAACCTTCAAGGAAAACTTCGATGACTTTAGATCGTACACTATATC
CatccaagaaaaattgaagACGCAATCTTCCCTGGAGCTTTCACAATCAC
CTTCCGCCAACAATTCATCACCTACAACCTCCATTTCAAACAAATTATTA
CGTCATCTACAGAATCGTGTACAACAATTACGTCAAGAAAATATTCAATT
GAAAGAGAATTTAAAGAACTCCTCGTTAACGGTCTTCGATACAAGTGATA
TAACGAGGCGAGTAGAAGATTTGGAATGTCAACTTCAGGACAAGGAAGTT
AAGATGAATGAGCAGCAAGCATTATTAGAATCGAAAATGTTGGAAGTGTT
GACGCTACAACACGCTCTCAAACAGTCAACAAAGGAGCGTCTTCGCCACG
AGAAACAATATGCAGACACAATGGCCATCAACCATACAGATCAAAGCCCG
AACACGCTTTCTCATCATTTAAACGGTAATGACTTGACCTCTGAAATCTC
TTGACAATTGATGAGAGAAGTCCAGAAAAATAAACAGTTACAACAAGACC
TTCGGAATGTCGATGATATACACCGCAATcttgaaaatgtcaaatttcaa
ctTAACCAGCACCAGAAGCTTTTCAAAAGTTTGGCAATCGAACTTTTCGA
AGAATGCACAAAAATGTCGGTCATCAAAGGCTCATCACCGAAGTCACCAA
AGTTAACTTGTTCATCTTCACCAGGGGACAAAGAACAGACGAATAtcttg
gtgaatgcaatgAAAACCTTCAAGGAAAACTTCGATGACTTTAGATCGTA
CACTATATCCatccaagaaaaattgaagACGCAATCTTCCCTGGAGCTTT
CACAATCACCTTCCGCCAACAATTCATCACCTACAACCTCCATTTCAAAC
AAATTATTACGTCATCTACAGAATCGTGTACAACAATTACGTCAAGAAAA
TATTCAATTGAAAGAGAATTTAAAGAACTCCTCGTTAACGGTCTTCGATA
CAAGTGATATAACGAGGCGAGTAGAAGATTTGGAATGTCAACTTCAGGAC
AAGGAAGTTAAGATGAATGAGCAGCAAGCATTATTAGAATCGAAAATGTT
GGAAGTGTTGACGCTACAACACGCTCTCAAACAGTCAACAAAGGAGCGTC
TTCGCCACGAGAAACAATATGCAGACACAATGGCCATCAACCATACAGAT
CAAAGCCCGAACACGCTTTCTCATCATTTAAACGGTAATGACTTGACCTC
TGAAATCTCTTGACAATTGATGAGAGAAGTCCAGAAAAATAAACAGTTAC
AACAAGACCTTCGGAATGTCGATGATATACACCGCAATcttgaaaatgtc
aaatttcaactTAACCAGCACCAGAAGCTTTTCAAAAGTTTGGCAATCGA
ACTTTTCGAAGAATGCACAAAAATGTCGGTCATCAAAGGCTCATCACCGA
AGTCACCAAAGTTAACTTGTTCATCTTCACCAGGGGACAAAGAACAGACG
AATAtcttggtgaatgcaatgAAAACCTTCAAGGAAAACTTCGATGACTT
TAGATCGTACACTATATCCatccaagaaaaattgaagACGCAATCTTCCC
TGGAGCTTTCACAATCACCTTCCGCCAACAATTCATCACCTACAACCTCC
ATTTCAAACAAATTATTACGTCATCTACAGAATCGTGTACAACAATTACG
TCAAGAAAATATTCAATTGAAAGAGAATTTAAAGAACTCCTCGTTAACGG
TCTTCGATACAAGTGATATAACGAGGCGAGTAGAAGATTTGGAATGTCAA
CTTCAGGACAAGGAAGTTAAGATGAATGAGCAGCAAGCATTATTAGAATC
GAAAATGTTGGAAGTGTTGACGCTACAACACGCTCTCAAACAGTCAACAA
AGGAGCGTCTTCGCCACGAGAAACAATATGCAGACACAATGGCCATCAAC
CATACAGATCAAAGCCCGAACACGCTTTCTCATCATTTAAACGGTAATGA
CTTGACCTCTGAAATCTCTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016209XLOC_016209Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028581-exon-sc0000692-1491911889:16440..16544TCONS_00028581-exon-sc0000692-1491911889:16440..16544Clytia hemisphaericaexon
TCONS_00028581-exon-sc0000692-1510915933:16440..16544TCONS_00028581-exon-sc0000692-1510915933:16440..16544Clytia hemisphaericaexon
TCONS_00028581-exon-sc0000692-1575043694:16440..16544TCONS_00028581-exon-sc0000692-1575043694:16440..16544Clytia hemisphaericaexon
TCONS_00028581-exon-sc0000692-1491911889:18148..18239TCONS_00028581-exon-sc0000692-1491911889:18148..18239Clytia hemisphaericaexon
TCONS_00028581-exon-sc0000692-1510915933:18148..18239TCONS_00028581-exon-sc0000692-1510915933:18148..18239Clytia hemisphaericaexon
TCONS_00028581-exon-sc0000692-1575043694:18148..18239TCONS_00028581-exon-sc0000692-1575043694:18148..18239Clytia hemisphaericaexon
TCONS_00028581-exon-sc0000692-1491911889:18613..18673TCONS_00028581-exon-sc0000692-1491911889:18613..18673Clytia hemisphaericaexon
TCONS_00028581-exon-sc0000692-1510915933:18613..18673TCONS_00028581-exon-sc0000692-1510915933:18613..18673Clytia hemisphaericaexon
TCONS_00028581-exon-sc0000692-1575043694:18613..18673TCONS_00028581-exon-sc0000692-1575043694:18613..18673Clytia hemisphaericaexon
TCONS_00028581-exon-sc0000692-1491911889:19472..19537TCONS_00028581-exon-sc0000692-1491911889:19472..19537Clytia hemisphaericaexon
TCONS_00028581-exon-sc0000692-1510915933:19472..19537TCONS_00028581-exon-sc0000692-1510915933:19472..19537Clytia hemisphaericaexon
TCONS_00028581-exon-sc0000692-1575043694:19472..19537TCONS_00028581-exon-sc0000692-1575043694:19472..19537Clytia hemisphaericaexon
TCONS_00028581-exon-sc0000692-1491911889:19714..19875TCONS_00028581-exon-sc0000692-1491911889:19714..19875Clytia hemisphaericaexon
TCONS_00028581-exon-sc0000692-1510915933:19714..19875TCONS_00028581-exon-sc0000692-1510915933:19714..19875Clytia hemisphaericaexon
TCONS_00028581-exon-sc0000692-1575043694:19714..19875TCONS_00028581-exon-sc0000692-1575043694:19714..19875Clytia hemisphaericaexon
TCONS_00028581-exon-sc0000692-1491911889:20492..20548TCONS_00028581-exon-sc0000692-1491911889:20492..20548Clytia hemisphaericaexon
TCONS_00028581-exon-sc0000692-1510915933:20492..20548TCONS_00028581-exon-sc0000692-1510915933:20492..20548Clytia hemisphaericaexon
TCONS_00028581-exon-sc0000692-1575043694:20492..20548TCONS_00028581-exon-sc0000692-1575043694:20492..20548Clytia hemisphaericaexon
TCONS_00028581-exon-sc0000692-1491911889:24027..24122TCONS_00028581-exon-sc0000692-1491911889:24027..24122Clytia hemisphaericaexon
TCONS_00028581-exon-sc0000692-1510915933:24027..24122TCONS_00028581-exon-sc0000692-1510915933:24027..24122Clytia hemisphaericaexon
TCONS_00028581-exon-sc0000692-1575043694:24027..24122TCONS_00028581-exon-sc0000692-1575043694:24027..24122Clytia hemisphaericaexon
TCONS_00028581-exon-sc0000692-1491911889:24828..25163TCONS_00028581-exon-sc0000692-1491911889:24828..25163Clytia hemisphaericaexon
TCONS_00028581-exon-sc0000692-1510915933:24828..25163TCONS_00028581-exon-sc0000692-1510915933:24828..25163Clytia hemisphaericaexon
TCONS_00028581-exon-sc0000692-1575043694:24828..25163TCONS_00028581-exon-sc0000692-1575043694:24828..25163Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028581-proteinTCONS_00028581-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000692supercontigsc0000692:16440..25163 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.97682	4.93019	1.9808	1.25718	12.503	10.5501	6.94592	8.01239	4.20314	5.13284	4.05344	4.38236	2.61696	3.24894	3.68242	3.32214	5.32321	5.5603	1.55904	2.54686	3.04869	3.54538	7.12769	6.43437	8.52823	7.74138	2.59568	1.58165	4.32225	5.26747
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00028581 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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