TCONS_00028673 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00028673
Unique Name	TCONS_00028673
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1314

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000697:15833..20541+
coding sequence from alignment at sc0000697:15833..20541+

transcript sequence

>TCONS_00028673 ID=TCONS_00028673|Name=TCONS_00028673|organism=Clytia hemisphaerica|type=transcript|length=1314bp
TACAAGAGTTCTACCCATCTGACATTTCATTTCTTTCAGAAATACTATCC
ACCAGACTTCGATCCAACTAAACTTCCAAAATTGAAGAGAGGGAAGGATC
GACAGTTTGTTATCCGTATCATGGCTCCCTTTAGTATGAGATGCACGACC
TGCGGTGAATATATTTACAAAGGAAGGAAATTCAATTCTCGAATGGAAAC
GGTACAGAATGAGAACTACTTGGGTTTGCGTATTTATCGATTCTACATCC
GGTGCACCAAATGCATTTCTGAGATCACTTTTAAGACTGATCCAAAAAGT
TCTGATTACGTGATGGAAAAGGGTGCAACCAGGAACTTTGAATCGTTAAG
GCGACTGCAAGAGAAGATTGAACGAGAAAGCAAAGAAGTTGAACAAGAAG
AAGCTGCTAACCCTATGAAAGCTCTGGAAACTCGAACTCGTGACTCGAAA
CGTGAAATGGAGTCGATCGAAAAGTTGGAAGAGTTGAGAGACTTGAACAC
GCGGGCTGCTGCAATCGATCCGGAGAAATTGATAGAAGATCACTTGAGGG
TTGGTCAAAGGATGGTTGAAGATGAAATCAAACGACAGGAACAAGAAGAT
GAAGATATGATCAAaaatattttcGGTAAGAGCGGTACAGGAGGTGACGG
ATACCTACGGCGTATAATCGATGACGGAAGCAGTGACGACGATGACGCTT
CGACTTCTCATCAAAGTTCGTCGTCGTCGGCTGGGGACAAAAGAAAAGCT
ACTGATTTACTATTGGACAGAgATGATGTTGCTGGCAGTTCAAGTTCATA
TACAACCTCTTCCTCATCGTTGTCAATGGGCCCTACACCTGATCCCAGTA
ACAAAAAAGCTAAACTGAAAACACCCTTTGATGACCTAGCATCTATGGTC
AAAgtcagtaaaaataaaaataaagaaaagttgGCTGAAGAACAAGCCAA
AGCGGAAACGGAACGATTGGAAGCAGAAAAACggaaaaaggaagaagaag
aagaaatggaacggaaacagaaaaatattgttaaagaACCAGAAGCGTTG
CCCGCTTATAAAATCAATTTAAAGAAACAGACTGATAATAGTAATGCGAA
GATGAAAGGAGCTTCGTTGAGCTTGTTGGGTGGATATGGTTCGATGAGTG
GGAGCGATGATAGTGAGCAAGATTGAGTggattatttatttttgtacATA
TCATTTTAACCTTTTTGCTCCCACGTGTCTCATAAACGGAGGTAGGAATA
AAGAGGTGGATTGGGAAAATGTTTAAATTCTTATAAACGGGGCGACCTAA
GTGCTGGATACCCA

Run BLAST on NCBI

protein sequence of TCONS_00028673-protein

>TCONS_00028673-protein ID=TCONS_00028673-protein|Name=TCONS_00028673-protein|organism=Clytia hemisphaerica|type=polypeptide|length=391bp
YKSSTHLTFHFFQKYYPPDFDPTKLPKLKRGKDRQFVIRIMAPFSMRCTT
CGEYIYKGRKFNSRMETVQNENYLGLRIYRFYIRCTKCISEITFKTDPKS
SDYVMEKGATRNFESLRRLQEKIERESKEVEQEEAANPMKALETRTRDSK
REMESIEKLEELRDLNTRAAAIDPEKLIEDHLRVGQRMVEDEIKRQEQED
EDMIKNIFGKSGTGGDGYLRRIIDDGSSDDDDASTSHQSSSSSAGDKRKA
TDLLLDRDDVAGSSSSYTTSSSSLSMGPTPDPSNKKAKLKTPFDDLASMV
KVSKNKNKEKLAEEQAKAETERLEAEKRKKEEEEEMERKQKNIVKEPEAL
PAYKINLKKQTDNSNAKMKGASLSLLGGYGSMSGSDDSEQD

Run BLAST on NCBI

transcript from alignment at sc0000697:15833..20541+

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00028673 ID=TCONS_00028673|Name=TCONS_00028673|organism=Clytia hemisphaerica|type=transcript|length=4709bp|location=Sequence derived from alignment at sc0000697:15833..20541+ (Clytia hemisphaerica)
TACAAGAGTTCTACCCATCTGACATTTCATTTCTTTCAGAAATACTATCC
ACCAGACTTCGATCCAACTAAACTTCCAAAATTGAAGAGAGGGAAGGATC
GACAGTTTGTTATCCGTATCATGGCTCCCTTTAGTATGAGGTAAAAGCTT
TcatgatatttatttttatataggTCTTGCATGATACCATTATGAACCAg
gatatttcataaaaaatgttgaaaaatttctagCCATAAAAGAAATTTGC
TAATCTATGATTTTATGAGTCAACTTTTTACATGGGTAGTGACaatccaa
aacaaaaatttatattctatTATTTCGTAGATGCACGACCTGCGGTGAAT
ATATTTACAAAGGAAGGAAATTCAATTCTCGAATGGTTAGTATTCTACCA
TGTtaccttttttgattttcagttgttGATTAACTAAATTCCCAATTTTT
AGATATTGCTTTGCATGGTAGGTTTACAGACACAAGGTCTATGCTTTACA
Gacatatatatgtgaagaaataagaatttctgtccaactgtatatatttt
tttatttttttattttttatttatttttatctatagtataggtaacacga
acaaatagtacaaaactaaaggttcctaacctcccgcaaaaggaccacca
aATCATACCGCCAGGGGAAGGAACccaaactaagctaacaataaattaac
aaactatattcactcaggagattgggtggcagagcagcatatgcattttg
TCCTtatattaggactcgtcagcactgcatactgcaccctgaCTGGCCAG
ATCGATTTAGCTTTATATATAgctgaatttatttttcatattcttCGCAT
GAGTTATTTATAGCAAATCATAACAAAGCATTTTTGACGTCTTTTCCAGG
AAACGGTACAGAATGAGAACTACTTGGGTTTGCGTATTTATCGATTCTAC
ATCCGGTGCACCAAATGCATTTCTGAGATCACTTTTAAGGTAAGTCGTAC
TAGTTCTCAATACCCTGAGCAAGGTTTTATTAAGATTAATGTTTTTGTGa
ttgatattttcattgtaTAAAAAATTCGAATCATTTAACCTATCTTCCAC
GTAGAAATTCTATCGTATTAAAAcaatgatatatttttttgggACTTATG
TATAAAGTGCTGTAAAACACAGGTTTGGGATTATAAGCAATGGAATTTCT
AATTCTAATCACACCCAAAGAATGAAATTAATTACTTTCTGTTGCGATTG
ACTGTTGGTTAGAAGTCTAACGGGGGAATTTTTTACCTAACTTCCACGCT
TTTGTTATTTCTTCAGACTGATCCAAAAAGTTCTGATTACGTGATGGAAA
AGGGTGCAACCAGGAACTTTGAATCGTTAAGGCGACTGCAAGAGAAGATT
GAACGAGAAAGCAAAGAAGTTGAACAAGAAGAAGCTGCTAACCCTATGAA
AGTACGGTactgtattttttttcttaaaagaatCCCCAGTCTAATGATCT
ATTATAATTTTAAGCAGGAGGGGATCAGTACTATAATCTCTGACATCATG
GCGCTTATCGACATAGTATCCAGACAAAGATTTGAGAAAAGTTTACATTG
ATACTAATTAgcgattttcatcattttttaaaaattgtttactacatgtt
ttttttataagcatacaaaaatctgaagacaggctcagagatgcttaggt
cgaaagctttataaggctgaaaaatgcttgaggggatgcttatatcctaa
tacttaatactgcTTATATGCTGCTATACTACTATAATACTGCTTATATC
CATACTACAAAGTAGCTTATACCTTTTTCATAGGCTCGAAgtaatgctta
gcatatgcttaatttttccccatatctgagcctagatatgcttataagtg
caatgcttataaaaacaacaacatgtAATTAACCAATTTTACTTTCTGAA
AGAAGGTAACACTGACATGACTTCAAATTACTCTGGAGACCCGATTCTTC
CAAAACTCCAGCTCTCTCGTATTTTTTTCGTTCCGATAGATGATATGATA
CGGTCTTGAATATCCTTTATTCTCATTGTCACAAAAGTTCTTCATGTCAA
ACATCCCTTTTATCACCTGAGCATCAGTGGGGATTCTTTCTATATTGATT
TAGGTGTTTTGGCACAATGGTAcaatcattttaaaatttttcaaatcgac
CAACACTGTTTTAAGTGTCAATTAAATTTAGCttctaaaattagaaaatc
GATCAAGATTTGCttgaatttaattaattttttacatTCTATATTTTTCC
GATTTCACACTTCAGGCTCTGGAAACTCGAACTCGTGACTCGAAACGTGA
AATGGAGTCGATCGAAAAGTTGGAAGAGTTGAGAGACTTGAACACGCGGG
CTGCTGCAAGTAAGCGTGCTACTGCTCTGTTCTGATTAAATAAATTTGTG
TCTGATTTTTAAGGATTTCCAGTACACTTTAAGCTGTCTTTGAGTCAGTC
TTTAAGTCAGTACCTTTGCATAACCCTTTAAGCTGTCTTTAAGTCAGTCT
AAGCAAAGAAACAGTTTATGAAAtttcaaacataaaaaaaattaacaaaa
tttagGCTCATGAAAATTTATGTGCATTACCCCTCTTTTTGTTTTACCTT
TTTAGTCGATCCGGAGAAATTGATAGAAGATCACTTGAGGGTTGGTCAAA
GGATGGTTGAAGATGAAATCAAACGACAGGAACAAGAAGATGAAGATATG
ATCAAGTATGAACCAATTTTGTTGTGCAATAGGGATTGtgttaccttaaa
ggaagaaattttggcgggaatttaatttggcggatggccaaaaaagNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNggcggatttcagtcaaatccgccaaatccgccaaatttt
ctttccgccaaaatttctccctTTAAGGTATTAAATAGTAACCTTAAAGT
AGAATTGCTGCTGCTTTAATCATCAATTTGAGTGTTTTTTGCTTTCTGTG
AGATAAATCTCAGATACAAGATTCCAATAATTTATTCAGTTGGGTTGGAA
ATCGGGATTTTTTAGaggaaagaaaatgactgaaatggAATGCAGTTAAT
CCCATTGAGTCAAAGAGACGGGGTTTCGCAGCtcagaaaatgctcaaaat
gtgaTTATGATTGTCATTAAGAATAAACTTCTTAGTAATTAGTCTTTTCA
TCTAGCCATACAAAAAAccatcattatttttctttagaaatattttcGGT
AAGAGCGGTACAGGAGGTGACGGATACCTACGGCGTATAATCGATGACGG
AAGCAGTGACGACGATGACGCTTCGACTTCTCATCAAAGTTCGTCGTCGT
CGGCTGGGGACAAAAGAAAAGCTACTGATTTACTATTGGACAGAGTAAGA
AATGTGAAAACTATTCTTTAGAATGTTTGCTAACGTCTTTTACTTTTTGC
GAACTTTTGTATAATAATTTCTCCAATACACATTATAAGAAGCTTTCACG
ATAAATTTGTTGAAAATGTTCAACTTCAATATTCGTCTCacttattgaaa
aaattttatcaaacccATTTTTTTCAGACTCGCTACTATCGAATCAGAGA
TAATCAAAGGATCCGATCCTTTCATATTATTagatattatatattataaC
ATCGCTGTCGTACTGTGTTAACCTTATCGAATATAACAGCAACAAATATg
actaaagaaaaaaatgatagtAGCCCTCCAATATTGTAGATTTCGGTCTA
AGAAATCTCATGCAAAGGAAATAGAACACGAtcattttttctaaagtttt
ttttttcaactttcaggATGATGTTGCTGGCAGTTCAAGTTCATATACAA
CCTCTTCCTCATCGTTGTCAATGGGCCCTACACCTGATCCCAGTAACAAA
AAAGCTAAACTGAAAACACCCTTTGATGACCTAGCATCTATGGTCAAAgt
cagtaaaaataaaaataaagaaaagttgGCTGAAGAACAAGCCAAAGCGG
AAACGGAACGATTGGAAGCAGAAAAACggaaaaaggaagaagaagaagaa
atggaacggaaacagaaaaatattgttaaagaACCAGAAGCGTTGCCCGC
TTATAAAATCAATTTAAAGAAACAGACTGATAATAGTAATGCGAAGATGA
AAGGAGCTTCGTTGAGCTTGTTGGGTGGATATGGTTCGATGAGTGGGAGC
GATGATAGTGAGCAAGATTGAGTggattatttatttttgtacATATCATT
TTAACCTTTTTGCTCCCACGTGTCTCATAAACGGAGGTAGGAATAAAGAG
GTGGATTGGGAAAATGTTTAAATTCTTATAAACGGGGCGACCTAAGTGCT
GGATACCCA

Coding sequence (CDS) from alignment at sc0000697:15833..20541+

>TCONS_00028673 ID=TCONS_00028673|Name=TCONS_00028673|organism=Clytia hemisphaerica|type=CDS|length=9408bp|location=Sequence derived from alignment at sc0000697:15833..20541+ (Clytia hemisphaerica)
TACAAGAGTTCTACCCATCTGACATTTCATTTCTTTCAGAAATACTATCC
ACCAGACTTCGATCCAACTAAACTTCCAAAATTGAAGAGAGGGAAGGATC
GACAGTTTGTTATCCGTATCATGGCTCCCTTTAGTATGAGATGCACGACC
TGCGGTGAATATATTTACAAAGGAAGGAAATTCAATTCTCGAATGGAAAC
GGTACAGAATGAGAACTACTTGGGTTTGCGTATTTATCGATTCTACATCC
GGTGCACCAAATGCATTTCTGAGATCACTTTTAAGACTGATCCAAAAAGT
TCTGATTACGTGATGGAAAAGGGTGCAACCAGGAACTTTGAATCGTTAAG
GCGACTGCAAGAGAAGATTGAACGAGAAAGCAAAGAAGTTGAACAAGAAG
AAGCTGCTAACCCTATGAAAGCTCTGGAAACTCGAACTCGTGACTCGAAA
CGTGAAATGGAGTCGATCGAAAAGTTGGAAGAGTTGAGAGACTTGAACAC
GCGGGCTGCTGCAATCGATCCGGAGAAATTGATAGAAGATCACTTGAGGG
TTGGTCAAAGGATGGTTGAAGATGAAATCAAACGACAGGAACAAGAAGAT
GAAGATATGATCAAaaatattttcGGTAAGAGCGGTACAGGAGGTGACGG
ATACCTACGGCGTATAATCGATGACGGAAGCAGTGACGACGATGACGCTT
CGACTTCTCATCAAAGTTCGTCGTCGTCGGCTGGGGACAAAAGAAAAGCT
ACTGATTTACTATTGGACAGAgATGATGTTGCTGGCAGTTCAAGTTCATA
TACAACCTCTTCCTCATCGTTGTCAATGGGCCCTACACCTGATCCCAGTA
ACAAAAAAGCTAAACTGAAAACACCCTTTGATGACCTAGCATCTATGGTC
AAAgtcagtaaaaataaaaataaagaaaagttgGCTGAAGAACAAGCCAA
AGCGGAAACGGAACGATTGGAAGCAGAAAAACggaaaaaggaagaagaag
aagaaatggaacggaaacagaaaaatattgttaaagaACCAGAAGCGTTG
CCCGCTTATAAAATCAATTTAAAGAAACAGACTGATAATAGTAATGCGAA
GATGAAAGGAGCTTCGTTGAGCTTGTTGGGTGGATATGGTTCGATGAGTG
GGAGCGATGATAGTGAGCAAGATTGATACAAGAGTTCTACCCATCTGACA
TTTCATTTCTTTCAGAAATACTATCCACCAGACTTCGATCCAACTAAACT
TCCAAAATTGAAGAGAGGGAAGGATCGACAGTTTGTTATCCGTATCATGG
CTCCCTTTAGTATGAGATGCACGACCTGCGGTGAATATATTTACAAAGGA
AGGAAATTCAATTCTCGAATGGAAACGGTACAGAATGAGAACTACTTGGG
TTTGCGTATTTATCGATTCTACATCCGGTGCACCAAATGCATTTCTGAGA
TCACTTTTAAGACTGATCCAAAAAGTTCTGATTACGTGATGGAAAAGGGT
GCAACCAGGAACTTTGAATCGTTAAGGCGACTGCAAGAGAAGATTGAACG
AGAAAGCAAAGAAGTTGAACAAGAAGAAGCTGCTAACCCTATGAAAGCTC
TGGAAACTCGAACTCGTGACTCGAAACGTGAAATGGAGTCGATCGAAAAG
TTGGAAGAGTTGAGAGACTTGAACACGCGGGCTGCTGCAATCGATCCGGA
GAAATTGATAGAAGATCACTTGAGGGTTGGTCAAAGGATGGTTGAAGATG
AAATCAAACGACAGGAACAAGAAGATGAAGATATGATCAAaaatattttc
GGTAAGAGCGGTACAGGAGGTGACGGATACCTACGGCGTATAATCGATGA
CGGAAGCAGTGACGACGATGACGCTTCGACTTCTCATCAAAGTTCGTCGT
CGTCGGCTGGGGACAAAAGAAAAGCTACTGATTTACTATTGGACAGAgAT
GATGTTGCTGGCAGTTCAAGTTCATATACAACCTCTTCCTCATCGTTGTC
AATGGGCCCTACACCTGATCCCAGTAACAAAAAAGCTAAACTGAAAACAC
CCTTTGATGACCTAGCATCTATGGTCAAAgtcagtaaaaataaaaataaa
gaaaagttgGCTGAAGAACAAGCCAAAGCGGAAACGGAACGATTGGAAGC
AGAAAAACggaaaaaggaagaagaagaagaaatggaacggaaacagaaaa
atattgttaaagaACCAGAAGCGTTGCCCGCTTATAAAATCAATTTAAAG
AAACAGACTGATAATAGTAATGCGAAGATGAAAGGAGCTTCGTTGAGCTT
GTTGGGTGGATATGGTTCGATGAGTGGGAGCGATGATAGTGAGCAAGATT
GATACAAGAGTTCTACCCATCTGACATTTCATTTCTTTCAGAAATACTAT
CCACCAGACTTCGATCCAACTAAACTTCCAAAATTGAAGAGAGGGAAGGA
TCGACAGTTTGTTATCCGTATCATGGCTCCCTTTAGTATGAGATGCACGA
CCTGCGGTGAATATATTTACAAAGGAAGGAAATTCAATTCTCGAATGGAA
ACGGTACAGAATGAGAACTACTTGGGTTTGCGTATTTATCGATTCTACAT
CCGGTGCACCAAATGCATTTCTGAGATCACTTTTAAGACTGATCCAAAAA
GTTCTGATTACGTGATGGAAAAGGGTGCAACCAGGAACTTTGAATCGTTA
AGGCGACTGCAAGAGAAGATTGAACGAGAAAGCAAAGAAGTTGAACAAGA
AGAAGCTGCTAACCCTATGAAAGCTCTGGAAACTCGAACTCGTGACTCGA
AACGTGAAATGGAGTCGATCGAAAAGTTGGAAGAGTTGAGAGACTTGAAC
ACGCGGGCTGCTGCAATCGATCCGGAGAAATTGATAGAAGATCACTTGAG
GGTTGGTCAAAGGATGGTTGAAGATGAAATCAAACGACAGGAACAAGAAG
ATGAAGATATGATCAAaaatattttcGGTAAGAGCGGTACAGGAGGTGAC
GGATACCTACGGCGTATAATCGATGACGGAAGCAGTGACGACGATGACGC
TTCGACTTCTCATCAAAGTTCGTCGTCGTCGGCTGGGGACAAAAGAAAAG
CTACTGATTTACTATTGGACAGAgATGATGTTGCTGGCAGTTCAAGTTCA
TATACAACCTCTTCCTCATCGTTGTCAATGGGCCCTACACCTGATCCCAG
TAACAAAAAAGCTAAACTGAAAACACCCTTTGATGACCTAGCATCTATGG
TCAAAgtcagtaaaaataaaaataaagaaaagttgGCTGAAGAACAAGCC
AAAGCGGAAACGGAACGATTGGAAGCAGAAAAACggaaaaaggaagaaga
agaagaaatggaacggaaacagaaaaatattgttaaagaACCAGAAGCGT
TGCCCGCTTATAAAATCAATTTAAAGAAACAGACTGATAATAGTAATGCG
AAGATGAAAGGAGCTTCGTTGAGCTTGTTGGGTGGATATGGTTCGATGAG
TGGGAGCGATGATAGTGAGCAAGATTGATACAAGAGTTCTACCCATCTGA
CATTTCATTTCTTTCAGAAATACTATCCACCAGACTTCGATCCAACTAAA
CTTCCAAAATTGAAGAGAGGGAAGGATCGACAGTTTGTTATCCGTATCAT
GGCTCCCTTTAGTATGAGATGCACGACCTGCGGTGAATATATTTACAAAG
GAAGGAAATTCAATTCTCGAATGGAAACGGTACAGAATGAGAACTACTTG
GGTTTGCGTATTTATCGATTCTACATCCGGTGCACCAAATGCATTTCTGA
GATCACTTTTAAGACTGATCCAAAAAGTTCTGATTACGTGATGGAAAAGG
GTGCAACCAGGAACTTTGAATCGTTAAGGCGACTGCAAGAGAAGATTGAA
CGAGAAAGCAAAGAAGTTGAACAAGAAGAAGCTGCTAACCCTATGAAAGC
TCTGGAAACTCGAACTCGTGACTCGAAACGTGAAATGGAGTCGATCGAAA
AGTTGGAAGAGTTGAGAGACTTGAACACGCGGGCTGCTGCAATCGATCCG
GAGAAATTGATAGAAGATCACTTGAGGGTTGGTCAAAGGATGGTTGAAGA
TGAAATCAAACGACAGGAACAAGAAGATGAAGATATGATCAAaaatattt
tcGGTAAGAGCGGTACAGGAGGTGACGGATACCTACGGCGTATAATCGAT
GACGGAAGCAGTGACGACGATGACGCTTCGACTTCTCATCAAAGTTCGTC
GTCGTCGGCTGGGGACAAAAGAAAAGCTACTGATTTACTATTGGACAGAg
ATGATGTTGCTGGCAGTTCAAGTTCATATACAACCTCTTCCTCATCGTTG
TCAATGGGCCCTACACCTGATCCCAGTAACAAAAAAGCTAAACTGAAAAC
ACCCTTTGATGACCTAGCATCTATGGTCAAAgtcagtaaaaataaaaata
aagaaaagttgGCTGAAGAACAAGCCAAAGCGGAAACGGAACGATTGGAA
GCAGAAAAACggaaaaaggaagaagaagaagaaatggaacggaaacagaa
aaatattgttaaagaACCAGAAGCGTTGCCCGCTTATAAAATCAATTTAA
AGAAACAGACTGATAATAGTAATGCGAAGATGAAAGGAGCTTCGTTGAGC
TTGTTGGGTGGATATGGTTCGATGAGTGGGAGCGATGATAGTGAGCAAGA
TTGATACAAGAGTTCTACCCATCTGACATTTCATTTCTTTCAGAAATACT
ATCCACCAGACTTCGATCCAACTAAACTTCCAAAATTGAAGAGAGGGAAG
GATCGACAGTTTGTTATCCGTATCATGGCTCCCTTTAGTATGAGATGCAC
GACCTGCGGTGAATATATTTACAAAGGAAGGAAATTCAATTCTCGAATGG
AAACGGTACAGAATGAGAACTACTTGGGTTTGCGTATTTATCGATTCTAC
ATCCGGTGCACCAAATGCATTTCTGAGATCACTTTTAAGACTGATCCAAA
AAGTTCTGATTACGTGATGGAAAAGGGTGCAACCAGGAACTTTGAATCGT
TAAGGCGACTGCAAGAGAAGATTGAACGAGAAAGCAAAGAAGTTGAACAA
GAAGAAGCTGCTAACCCTATGAAAGCTCTGGAAACTCGAACTCGTGACTC
GAAACGTGAAATGGAGTCGATCGAAAAGTTGGAAGAGTTGAGAGACTTGA
ACACGCGGGCTGCTGCAATCGATCCGGAGAAATTGATAGAAGATCACTTG
AGGGTTGGTCAAAGGATGGTTGAAGATGAAATCAAACGACAGGAACAAGA
AGATGAAGATATGATCAAaaatattttcGGTAAGAGCGGTACAGGAGGTG
ACGGATACCTACGGCGTATAATCGATGACGGAAGCAGTGACGACGATGAC
GCTTCGACTTCTCATCAAAGTTCGTCGTCGTCGGCTGGGGACAAAAGAAA
AGCTACTGATTTACTATTGGACAGAgATGATGTTGCTGGCAGTTCAAGTT
CATATACAACCTCTTCCTCATCGTTGTCAATGGGCCCTACACCTGATCCC
AGTAACAAAAAAGCTAAACTGAAAACACCCTTTGATGACCTAGCATCTAT
GGTCAAAgtcagtaaaaataaaaataaagaaaagttgGCTGAAGAACAAG
CCAAAGCGGAAACGGAACGATTGGAAGCAGAAAAACggaaaaaggaagaa
gaagaagaaatggaacggaaacagaaaaatattgttaaagaACCAGAAGC
GTTGCCCGCTTATAAAATCAATTTAAAGAAACAGACTGATAATAGTAATG
CGAAGATGAAAGGAGCTTCGTTGAGCTTGTTGGGTGGATATGGTTCGATG
AGTGGGAGCGATGATAGTGAGCAAGATTGATACAAGAGTTCTACCCATCT
GACATTTCATTTCTTTCAGAAATACTATCCACCAGACTTCGATCCAACTA
AACTTCCAAAATTGAAGAGAGGGAAGGATCGACAGTTTGTTATCCGTATC
ATGGCTCCCTTTAGTATGAGATGCACGACCTGCGGTGAATATATTTACAA
AGGAAGGAAATTCAATTCTCGAATGGAAACGGTACAGAATGAGAACTACT
TGGGTTTGCGTATTTATCGATTCTACATCCGGTGCACCAAATGCATTTCT
GAGATCACTTTTAAGACTGATCCAAAAAGTTCTGATTACGTGATGGAAAA
GGGTGCAACCAGGAACTTTGAATCGTTAAGGCGACTGCAAGAGAAGATTG
AACGAGAAAGCAAAGAAGTTGAACAAGAAGAAGCTGCTAACCCTATGAAA
GCTCTGGAAACTCGAACTCGTGACTCGAAACGTGAAATGGAGTCGATCGA
AAAGTTGGAAGAGTTGAGAGACTTGAACACGCGGGCTGCTGCAATCGATC
CGGAGAAATTGATAGAAGATCACTTGAGGGTTGGTCAAAGGATGGTTGAA
GATGAAATCAAACGACAGGAACAAGAAGATGAAGATATGATCAAaaatat
tttcGGTAAGAGCGGTACAGGAGGTGACGGATACCTACGGCGTATAATCG
ATGACGGAAGCAGTGACGACGATGACGCTTCGACTTCTCATCAAAGTTCG
TCGTCGTCGGCTGGGGACAAAAGAAAAGCTACTGATTTACTATTGGACAG
AgATGATGTTGCTGGCAGTTCAAGTTCATATACAACCTCTTCCTCATCGT
TGTCAATGGGCCCTACACCTGATCCCAGTAACAAAAAAGCTAAACTGAAA
ACACCCTTTGATGACCTAGCATCTATGGTCAAAgtcagtaaaaataaaaa
taaagaaaagttgGCTGAAGAACAAGCCAAAGCGGAAACGGAACGATTGG
AAGCAGAAAAACggaaaaaggaagaagaagaagaaatggaacggaaacag
aaaaatattgttaaagaACCAGAAGCGTTGCCCGCTTATAAAATCAATTT
AAAGAAACAGACTGATAATAGTAATGCGAAGATGAAAGGAGCTTCGTTGA
GCTTGTTGGGTGGATATGGTTCGATGAGTGGGAGCGATGATAGTGAGCAA
GATTGATACAAGAGTTCTACCCATCTGACATTTCATTTCTTTCAGAAATA
CTATCCACCAGACTTCGATCCAACTAAACTTCCAAAATTGAAGAGAGGGA
AGGATCGACAGTTTGTTATCCGTATCATGGCTCCCTTTAGTATGAGATGC
ACGACCTGCGGTGAATATATTTACAAAGGAAGGAAATTCAATTCTCGAAT
GGAAACGGTACAGAATGAGAACTACTTGGGTTTGCGTATTTATCGATTCT
ACATCCGGTGCACCAAATGCATTTCTGAGATCACTTTTAAGACTGATCCA
AAAAGTTCTGATTACGTGATGGAAAAGGGTGCAACCAGGAACTTTGAATC
GTTAAGGCGACTGCAAGAGAAGATTGAACGAGAAAGCAAAGAAGTTGAAC
AAGAAGAAGCTGCTAACCCTATGAAAGCTCTGGAAACTCGAACTCGTGAC
TCGAAACGTGAAATGGAGTCGATCGAAAAGTTGGAAGAGTTGAGAGACTT
GAACACGCGGGCTGCTGCAATCGATCCGGAGAAATTGATAGAAGATCACT
TGAGGGTTGGTCAAAGGATGGTTGAAGATGAAATCAAACGACAGGAACAA
GAAGATGAAGATATGATCAAaaatattttcGGTAAGAGCGGTACAGGAGG
TGACGGATACCTACGGCGTATAATCGATGACGGAAGCAGTGACGACGATG
ACGCTTCGACTTCTCATCAAAGTTCGTCGTCGTCGGCTGGGGACAAAAGA
AAAGCTACTGATTTACTATTGGACAGAgATGATGTTGCTGGCAGTTCAAG
TTCATATACAACCTCTTCCTCATCGTTGTCAATGGGCCCTACACCTGATC
CCAGTAACAAAAAAGCTAAACTGAAAACACCCTTTGATGACCTAGCATCT
ATGGTCAAAgtcagtaaaaataaaaataaagaaaagttgGCTGAAGAACA
AGCCAAAGCGGAAACGGAACGATTGGAAGCAGAAAAACggaaaaaggaag
aagaagaagaaatggaacggaaacagaaaaatattgttaaagaACCAGAA
GCGTTGCCCGCTTATAAAATCAATTTAAAGAAACAGACTGATAATAGTAA
TGCGAAGATGAAAGGAGCTTCGTTGAGCTTGTTGGGTGGATATGGTTCGA
TGAGTGGGAGCGATGATAGTGAGCAAGATTGATACAAGAGTTCTACCCAT
CTGACATTTCATTTCTTTCAGAAATACTATCCACCAGACTTCGATCCAAC
TAAACTTCCAAAATTGAAGAGAGGGAAGGATCGACAGTTTGTTATCCGTA
TCATGGCTCCCTTTAGTATGAGATGCACGACCTGCGGTGAATATATTTAC
AAAGGAAGGAAATTCAATTCTCGAATGGAAACGGTACAGAATGAGAACTA
CTTGGGTTTGCGTATTTATCGATTCTACATCCGGTGCACCAAATGCATTT
CTGAGATCACTTTTAAGACTGATCCAAAAAGTTCTGATTACGTGATGGAA
AAGGGTGCAACCAGGAACTTTGAATCGTTAAGGCGACTGCAAGAGAAGAT
TGAACGAGAAAGCAAAGAAGTTGAACAAGAAGAAGCTGCTAACCCTATGA
AAGCTCTGGAAACTCGAACTCGTGACTCGAAACGTGAAATGGAGTCGATC
GAAAAGTTGGAAGAGTTGAGAGACTTGAACACGCGGGCTGCTGCAATCGA
TCCGGAGAAATTGATAGAAGATCACTTGAGGGTTGGTCAAAGGATGGTTG
AAGATGAAATCAAACGACAGGAACAAGAAGATGAAGATATGATCAAaaat
attttcGGTAAGAGCGGTACAGGAGGTGACGGATACCTACGGCGTATAAT
CGATGACGGAAGCAGTGACGACGATGACGCTTCGACTTCTCATCAAAGTT
CGTCGTCGTCGGCTGGGGACAAAAGAAAAGCTACTGATTTACTATTGGAC
AGAgATGATGTTGCTGGCAGTTCAAGTTCATATACAACCTCTTCCTCATC
GTTGTCAATGGGCCCTACACCTGATCCCAGTAACAAAAAAGCTAAACTGA
AAACACCCTTTGATGACCTAGCATCTATGGTCAAAgtcagtaaaaataaa
aataaagaaaagttgGCTGAAGAACAAGCCAAAGCGGAAACGGAACGATT
GGAAGCAGAAAAACggaaaaaggaagaagaagaagaaatggaacggaaac
agaaaaatattgttaaagaACCAGAAGCGTTGCCCGCTTATAAAATCAAT
TTAAAGAAACAGACTGATAATAGTAATGCGAAGATGAAAGGAGCTTCGTT
GAGCTTGTTGGGTGGATATGGTTCGATGAGTGGGAGCGATGATAGTGAGC
AAGATTGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_016264	XLOC_016264	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00028673-protein	TCONS_00028673-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000697	supercontig	sc0000697:15833..20541 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.6766	20.163	10.1788	7.18422	42.215	31.7166	28.3993	31.6108	21.7527	24.1291	19.4194	13.7919	13.6873	14.2809	13.5458	14.1258	18.39	15.7612	7.33795	8.53578	9.71628	9.44824	33.9045	29.5524	23.9576	22.6122	6.86782	5.21523	20.9895	23.4182

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR007590	CWC16

Blast

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BLAST of TCONS_00028673 vs. Swiss-Prot (Human)
Match: CCD94 (Coiled-coil domain-containing protein 94 OS=Homo sapiens GN=CCDC94 PE=1 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.341e-74
Identity = 110/171 (64.33%), Postives = 139/171 (81.29%), Query Frame = 1

Query:   31 FFQKYYPPDFDPTKLPKLKRGKDRQFVIRIMAPFSMRCTTCGEYIYKGRKFNSRMETVQNENYLGLRIYRFYIRCTKCISEITFKTDPKSSDYVMEKGATRNFESLRRLQEKIERESKEVEQEEAANPMKALETRTRDSKREMESIEKLEELRDLNTRAAAIDPEKLIEDH 543
               KYYPPDFDP+K+PKLK  KDRQ+V+R+MAPF+MRC TCGEYIYKG+KFN+R ETVQNE YLGL I+RFYI+CT+C++EITFKTDP+++DY ME GATRNF++ + L+E+ +R  KE E EE  NPMK LE RT+DSK EME +E L+EL+DLN R A +D E ++  H
Sbjct:    6 VLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARKETVQNEVYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGATRNFQAEKLLEEEEKRVQKEREDEELNNPMKVLENRTKDSKLEMEVLENLQELKDLNQRQAHVDFEAMLRQH 176

The following BLAST results are available for this feature:

BLAST of TCONS_00028673 vs. Swiss-Prot (Human)

BLAST of TCONS_00028673 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CCD94	2.341e-74	64.33	Coiled-coil domain-containing protein 94 OS=Homo s...	[more]

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TCONS_00028673 (transcript) - C. hemisphaerica