TCONS_00028681 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00028681
Unique Name	TCONS_00028681
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1450

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000697:110824..128009+
coding sequence from alignment at sc0000697:110824..128009+

transcript sequence

>TCONS_00028681 ID=TCONS_00028681|Name=TCONS_00028681|organism=Clytia hemisphaerica|type=transcript|length=1450bp
gtgaaatataCAGAATTTTGGGGAAAACTTgcacaaagaaaaaagaagaa
gatgcCAACGAGATCAATGAAATGGAAGCACTACAAGCAGGAGACAACAA
AAGAAAACGTAAAGAGATTTCAACTTCATCAatctttaatattttggtcT
CTTTCTTTCAGTTGAAAGCTTTGATAACAGTTCAGAGCAATGAAAAAACG
TTAATCGATAAACTTATGAACATGGATATTATGGTTAAAAGCAGTGATGC
TTTAGATGCACTTTGTCCTTTCAGGGGGTTTAATGTTGTATGGCGAGAGG
TTTTAAACGGATATACCATCCCATTTTTATTGTTAATCACTATTGCAACT
TTACACTTGATTGTAAGATTCGTGAAACACTTTCGACCATCAAGTTTAAG
ATTAACATGGTTGATAACGAGATTTTGTGTTGGGTATTATATCATCATCG
CTTTTTGCTACAAAAATATCTGCAGAACAGTCTTTCAGATTTTGAACTGC
AAAACAATAAATGAAGTAACATTCTTATACATTGACGGTACTGttgaatg
tttttctttgtgGCAGGTGGCAAATATGTTATTCTTGGTATTTTGGGTTG
TTCCATTCCCATTTGCAGTCGTTTTGGGCTACTAcctgtttaaaaacaaa
aagatttctgTGACCACGTATctcatatttttattatttccaATGTTTTG
TATTCTGAGAACTTGTTTCTCAAGATGGAAAAGAACTGTCGAGACTGACA
GGAGCGATTTCATTGGCAACAGATTCGCAGAAATATTCGAAGAGCCCTAC
AGAGACAAATTCTTTTGGTGGGAATCTTGGCGACTTATCGAACGTTTTAT
TGTTTCTGGCATAGCAGTATTTCTGACGAACCCTATCTATCGCATNCTAC
AGAGACAAATTCTTTTGGTGGGAATCTTGGCGACTTATCGAACGTTTTAT
TGTTTCTGGCATAGCAGTATTTCTGACAAACCCTATCTATCGCATCTTAT
ACCTGACCCCCGTCTTTGCTTCCTTATCGTATTTCCACTTTCGAATGAAT
CCTTATAAACGTTCGATGTATATTCTAAAACGATTAGATACAGTTTCTTG
GTTTTGTTTATCCATTCATTTGTTCATCAACGGAATGCGAGCTGTTGTCT
ACATTTATGATGTACCTAATATCGACTTTATACGTCATGCACTAGAAGCT
GCTAACATATTGGAGAATTTATTTTCACCACTCTGGTATCTTATTATTTC
ATTCTTTCTTAGGAAGTTGTGtgaaaaatgtttgaatttttaaatgttAT
ATAATGGAAACTTTCTCAGCAGTGCTAGCCTTTTTAGCTAGTATTTTTAA
GACAAATACTGATAAGAGCCTACTCTTAGGTGCCTAATAAAGGCCCCcct
cttgtttatttttttaaatttcttttccaaccccggaccttattaggacc

Run BLAST on NCBI

protein sequence of TCONS_00028681-protein

>TCONS_00028681-protein ID=TCONS_00028681-protein|Name=TCONS_00028681-protein|organism=Clytia hemisphaerica|type=polypeptide|length=351bp
EIYRILGKTCTKKKEEDANEINEMEALQAGDNKRKRKEISTSSIFNILVS
FFQLKALITVQSNEKTLIDKLMNMDIMVKSSDALDALCPFRGFNVVWREV
LNGYTIPFLLLITIATLHLIVRFVKHFRPSSLRLTWLITRFCVGYYIIIA
FCYKNICRTVFQILNCKTINEVTFLYIDGTVECFSLWQVANMLFLVFWVV
PFPFAVVLGYYLFKNKKISVTTYLIFLLFPMFCILRTCFSRWKRTVETDR
SDFIGNRFAEIFEEPYRDKFFWWESWRLIERFIVSGIAVFLTNPIYRXLQ
RQILLVGILATYRTFYCFWHSSISDKPYLSHLIPDPRLCFLIVFPLSNES
L

Run BLAST on NCBI

transcript from alignment at sc0000697:110824..128009+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00028681 ID=TCONS_00028681|Name=TCONS_00028681|organism=Clytia hemisphaerica|type=transcript|length=17186bp|location=Sequence derived from alignment at sc0000697:110824..128009+ (Clytia hemisphaerica)
gtgaaatataCAGAATTTTGGGGTAAGTAGGAAACCTGGCATATCTCTCT
GGCTCGGGCCATATGGCCTACTCCATGGCCTTCCCTTTGGCCTACcttca
aaaaaaagagaaaattttgtcTGAAACGAAAGCTATAGTATAATTGCttt
aaatttgattaaattaacTGAACTAAAGATGCAAACCCTTATGCCTTTAT
AAAAAGAGTAAACagaaaatgcttgaaatttcttcttcttcttcttccat
catATCAATCCAATTTCGTTGATTACCCACTGTAGAACCAACTTGAACAC
TGTCATCGATATGAATTTCGACCTCGTGTATAATAGGGGTGGGTTCCAAA
ATTACACTTTTCGAGTTCAaccatctttttttttaattaatttttcatgc
tgattccgaatttgaaaTCCGTTTTTTTTGTAATCCCCTGGGCAGCTACC
AGAGACCCCTTTTCCAGAAAACCGCCCAAAACTGCTAAAGgtcaatgttt
ttgaaattttccattttgaataCAGTAGCTTTCTAGTAATGTGATATCTC
ttttaaaaatcagtttttcatgctgattccgaatttgaaaTTCTATCACA
ACTCTCACCTTGACCTGGTATTGGAGgctttttttttactaaaatcatCG
AAACtaagaaaattgataatttgaaaGTGTTTGAACTTAATGAACTTTGA
ATGATAATGACTTGTTTTAGATCAGATTTTCATGTTGATTCCGGATTTCA
AATCAGTTTTTGAATATCTCCTCCCCCTGGCCTGCTACTACCTGCTACAG
GGCCGGTTACATAAGGTTCCTTATTAGGAAAATATCGCAAGAAATGTact
gaaataaatatttttgaaaggagATTCTTGTACTTGGATTCAATTTATCA
AAACATTTGGTTATACATTCCTTGATACAAAGAGTTTTGAATACTTTATC
TAATGATCCAACCCTATGGACTGAGCTGCTTTTAATTTGTCTGCTTAGAA
TATAATCAAAGTAATGTAAAAATCAAATGGTTAAGAATATCTTGAGCTAG
TAATAGTCCAGGAGCCAAATCCTctatctccttaaataagcacttttgct
caacccaagattctacaggataaactatatatttttggaatcctcaatta
tcctagtttaagaaatggtcggtccccaaagctaactcctggtcaatttt
tNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Taagaagttttttaaatttcaaggcaaacagaaaagtccttcggaagata
tgggacccgaaataccccttggtagcacttttctgtgaaatatcaaatct
cgaACTTATTACGCTTTGCatcgtaaattctgaaaaatttaacaaagttc
taaaattatatctaaACTATTATCGCTGTAAAATTCTgagacaaaaataa
agaaaaaccagataaaaaaactGACATATAGAAATtattcttcaacgatt
ctactaagtaaaacctctaaattttactggctgtNAAATTTCGGAgttac
tttttaccctttgtaaggatttgtttaAGGTGGGAGCCACATGAAGTTtt
gagatttggtgaaaaaattatcgatttcgGGATTTTGCGCGTTTTATGAC
CCTTATACCCTTTCTGAACAcactctgaaaattttaaggccgtagcattt
atatttcctagtttttctagaccctgatctaaagtattttccttagcaac
gaaaaatcatacccgttgctagggcccgatttctttatggctgatctaaa
cataggatcatgacataccaaacgaaagatctttttacgcccttttcagG
CGTCTAAATCAATATAGACTAGTAAACcgcgtcgttgtatttcgctgcag
attaaacttgcaataggatctatttttttatatgttcactgaatacaacg
actaaagtctgtccagatataattggcagtggaaacaagaatgcctgtaa
cttttgatagtcaaatataattatggaaatttttttgcttgttttagaga
NtgtgatttttttcaaagttgggaaacTCTTAGCTTAAAGTTTGCTGTGG
AGgcaagtacatgtttttttttataagcattgcacttataagcatatcta
ggctcagatatggggaaaaattaagcatatggcaagcattacctCGAGCC
TACGNCACGATTTTTAGCagtttaatttgcgattgtaaaagttgagcttt
ttttctacttatgctataacgttcatttttacaccagtggtagttcaacc
ttaggttaagaagttttttaaatttcaaggcaaacagaaaagtcNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNatgcttataaaaaaaacatgt
acttgaCAGACTTTTACCCTCTTACtcgagttgttgacaaacaggagcaa
actcttgacataaaaagtaaaaaatctgtgacttttttctcggctgtagc
acaggaatttaaaacagttaaaatggCCTACTTTGGCGTACGGTGGTATA
AACCCTGCCTGAATTTCCTTTTTAAGAGAGGTAAGTGCAAAGTTAAGCCT
TAGCTTTAAAGTCCCCCCCccgaattttcttcgtcgcaggccctaaatat
attttattttgagaataaatttaaatcgAGGTTTGGCCCAAATTCATGGT
CTGGAAAGTCGCGAGCTTCAAAGACGTGGTACAACCAGAGCACGCTAATT
CCAAAGTTTGACCCCCTGTCTCATTGAAGAAAAGCTGTGGAAAGGAAAAA
atgagcgaagcgagcgcgaacaTTTTTTGACAACTATCACTCTTTCATTG
CTGAGAAAACTGCCTTAACACACTATTGTTACCCtaatatgccttgtttg
gtcaaacaattcattcagaatctttgattattttcaatactGACCATTTA
CTGGTGTACGGCGAGTGACGTACCTGCCTTACACGGTGCGGCGTCACaag
agtttttttctgaatattcgatgatgcaatcatataaaattttttagaaC
TATCTACCTACTTTTGTAAATTATCGAAGAATCAAATACCCTTCACTGTC
TCCAAGTTCATACGGTATATGATAACAATATAAGCGGTTACAGAAAGACG
ACCATCATTAGcgccgacgaagaaaattttctcatttagacttttttgtt
ttggctgAAAACACTCTCGCTGGATGcaatatttgcatcacaaaatgcgc
ccttagaaaaataaggaaaaaatgtttgtttctgtttcaatttttgatta
ttttgaataactttacaaTGGCAATAGGTCAATATGATATCAAGgattat
gcgagcgaagcgagcaagaaaattttacataTTTAGGTTTATTCAGTTTT
GTTTTCACGTTCACGCTCAAAATCTCGATTCACCGGCGAATTCACGCtgg
taaaatcttattttcacgttcacgcggatatctcaattcacgtattcacg
cgctgaaaaagtccaattaacgtattcacgacagaaaaaTAGGTCATTCA
CAcgtcacgccagcccctgggggagcccccTAATAAACCATAGTCAAGAG
GATATTGcgtatgaaatttatcaaaaaattctgcgtcatcttaaataggg
tgaaatagaaaccaatcctagttaaggcccggcctccacttgcgtacgct
gtgattgcacttctcaaacaaaatcttctattttaNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagcgcagacaatgaa
gagacgtgccttcaggaagctagactttttgagtttatagctatatatac
tttcactttatggtgtttctgtatgactgtctgtctACTTAGTCTAACCa
gcgttaaatgccttcgggaaggtccatcctaacttggaaagccagaattg
gagctatttcaccaaaccactggagcgtaagttatttaggctatcacaac
tgcatgaaaaagttgaatgtgcgcatgtaaagttaaacgaatgtaaaaaa
actttttgcaggtttttgaaattaagatttaccacactgaaaaaacagtg
aaaaactctaactgaggtaaatctattttgaagaccaaaagaaaaagttt
gtttacattgattgacattcaacattcattcaaccacttttggattcaac
tttacatatgcatacattcaactttttacattcaatcttgttttactaag
ttaagatggacattctcgagttacgaccatatgatggtatttaaagcttg
agaagctctataaacaataaaggttgttattaataaaataaaagacaaaa
gataaattagagtttgaacaaaaatatcaaatgtatatacatttgaaaac
ttgagcaaatttctttaaagattccggaaaaagaattgaaatcattgcNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgcttcagcttttcaaag
ctaaatcaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNtcagcttttcaaagctaaatcaaaactaaaa
ttgtaatatgtaataatagtaatagcatataacgtaatatgaaaatatgt
atactaccgtcccgaaaaaaaaaccgagcatttacggaagagactaaatA
CGGGatgctcctgcgggggcaaaaaatggttaaacaatgaaaataactGA
AGCTACCTTCAGCTGAATGTAATTGTCTAAGTAACGATCTTATAAATTGA
AAAAGCTATCTATTATTGACAGATCAATCTATCCCTTCGATTTCCAGACG
AAAAATGACTTTAATTTCCAATACTTTTCAGTTTTGTCTCCTGTTTCTAT
TCGTTTCCATGTCGTTTCCATGTCGTTTCCCTGTCGTTTCCCCTCGTTTC
CTGGGCGTTTCACGTTTTAGTAAGTACGGTTGcgttcgtggaacgtctca
ggaGAGAATATACTCTGAACTTGCCTTGAACGCTTTGCTGACAGACACTT
TTCCAGAagaatgatatttttctataagatTATAAATAACCAAGCTCCGT
CTTACTTACGTAACTATCTACTAGCAAGGCTTACAGAGCCAgttaatata
agaacaaaaaatcctatttatcctcttaatatactaATTGAGCGTTTTCG
TAATAATTATTTTCCTCActgtatacatgtttttttttttataagcaagt
gtatgccccttggtcaggctcgagtatgcttaagttctcaaagcatccag
gcatagtttatgcttattatatgcttaagaattatgcttatgaCTCACCC
GAGCCaagctttttaatgaaatttcagaaattttgtaaaaaatttgttca
gattttgggagcagtggaatgtagctagccgtggaatgtcttatttttta
cttgacctcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNattttaggctgacatatatgctcatgttatgcttaggaatt
ctgcaaatctgagccttcatatgcttataagcgttatgcttataaaaaaa
aaaacatgtatcccCGTGGAATGTCCTGGAAGGACGGTAATATAAGAAAT
CTACCTTCTATAAAGACCTTTAAAATagcaattttaaaaaatttttgaga
cccaaacaTGTTTCTGAAAATCAAGGTGTAGTCTTTCGAAATTGACTTTG
GGTAGAGTTTAGTCATCTCAACGAGCACAACTTTAGGCATGGTTTTCGTG
ATACTTTAgaccttttttgttgttgtcgaACTAACTCAGTTGAAAATGCT
CAGCACTTTTTTCTGCACTGCTTTATACAAACTACAAGAGTTAAGTATTG
TTTTCCTTCCACTAAATCCTTCTTATTTTGTCTGCTTTTATTTTACGGTG
TAAATAATCCTTTCTGTCGTCGAATATATCCATTAATCTGGAAGGATCAG
TGGTGCCTTATTTTAGTCTACTACAACCATAGCTCTCTCCACGTCACact
ttgttttactttttcatttcttcatAGTCTATTACATCTGGCGATATAAC
TTCCGTTTCTAGCggagggagggactatattaatGTTTAGTAGTATTTTG
TAGTATATGTTCGTATTGTATTGTACCCTGTGTTTAtattctaataaaga
aaaaaaaacaaagaaaaaaataacttttcctTGAAGCGACATTTTGAAAC
TTTGCCGTATTGGAAACCATCCCAGAATTTAACATCCGTTTCTTTGGTCG
ATATGACAAATGGCCTGAAAACGCCAGATGAATAATTTGTTAAGCTTAGT
TTCCATTTTCTTTCAATTAAAGATTGTTTTAGGGTTCTAGTGACCTCGCC
AATTGAATGTATAAACTGACCCCTTAACAATTCTTTTTTGTTGTATATCT
TCGTTCAACTTTAGATAgatgataaaacaaaaaagatggCTTGTTTTGTA
CTTCActtattgttgttgtttatgTTGAAAATACCACATCAATTTTCTTT
GACAATTGGTAAGTTTCGAACAAgatttttcattgttatttttcgTGCTA
GTAGTCTTatgccccggggggggggggactccCCTTNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNGTCTTATGCTAGTCTTTAAAAATGGTTTCCTGCCAACTGGC
AACCCTAATCAaaacttaaaatcttttaaaatattgtttttgaaCAATAA
ACATTTATTTTGGTCAGAATATTGCAACTAGAGAAGGACTATTGCTAGAG
GAGCTAGATCTAATAAAATAGTTGACAAACAAAACCCAAGAGAGGAATAT
GTTAGGAGTAGAATCTACCACATTGATGTTCTTTTGTGTATAATTCTGAG
AAAATCGTTGAAACGATTTTAAACTTTCAGACTTTTAATGAAATCTGATT
GAGAGTTCTTATGCAAATTCTTAGCGTCATAGATTGTCTAGATCAGGGTt
gatgactttattgtgaaattaaaatgacgtcatcaaattttcaaaatgtt
actcatcttcagcaagGATTTTAAACGAAAACCCTCAAGGAAAACacaaa
accggcaaatatgttaaagagtCTGTCTTTTATGTTTCataatcttcaaa
cagaatctttAAACcctgggggagggggtactttgtcaaaatttggcacg
gggacgtgccgctggtcagggtcccttttttaggctctgaagatatctga
cagggtccaatATTTACTAGTTGTTAAGATGTGTATCTGAAAGTCGACTT
TAGGTCATTTTTGAAGATTATTTTCTGGGTGGAAATtagaaacattttca
atttttcgtctacttttattcattttggtcaattttcagcatgaaaattg
aaaatattttcgaatttattttctgacagggtcccaaatttaccaaatat
tcatatctgatagggtccacttttcaagcTCCAGCGACACCGTCGGCCGT
CCAAGTCAGTGCCCCCGGTTCTTTAAATAACTTCATTGATTCGACTGtga
caaacatttttttaaaccatacatTTGGGCTCTTtgccgacaggtggaaa
ttttgtgatggcGTCATCGATTTTTGGATTGctttttatcgatttttctt
CCTTCTGGAAGTTCATGTCTTGATAGAAAACAACTTTACCAATTTTTATG
TCAATATCTCTTCTAGATCGATAATAGAGgatggtagattctacccctgC
TGGGGctacaaaaatcgaaaaaacttgGGGTTGGTACGGTTCAGTGGAAA
GAACATTATGAATTTCTTTCCGATTGACATTCAAATGATCTAAAGTCATT
TTATCCTTCTTTTTCAGACACGTTTGCAAGCTCAACAACAGTGCACGTTT
CACCAAAAGGGAGAGATGAAGAAAATTGCGGCTTGAAgcacaaaaaatgt
caaactaTTGATCATGTATTGAAAGAGTCTAAAATTAGCAATATGAAGTT
GGTTTTAGAGAACTCTCAGAGTCAAAGCATTGTTTATCAAACTCAAGGAA
TGTTACGTCCTGACTGTGATTATTTTCAGTTACgaatttcaaaagaaagc
cAAAATGGAACAAACCCGACTATATATGGAAATGAATTACCCTTCATTCA
ACCCAAAGGTGCTTTCAGTCTATCTATTGATCAGGTCGACCTTCAGAGTC
TCGTAATTCTTAACTCTATGGATCAAAACTCAAGCATTGCCATATCTTTT
CGAAACTTGAATATTAGAACAGAGATAACAGGAGATTTCATATCCACCAC
CAACACAAACAGCAATCTTAACGTCACTGTACAATCTTGTGTTTTGATAT
CACCGACCAGGAATGCGTGGTTGAATATATCAACGAAAAAAGCGACTTCT
TTTAAATCAATCATCAAATTAACCAACAACACAATTCGAGGAGGGCGTTT
TATCATAAAAAACGTTCAAGTACTTGATTTTTCACAAACAAAAATACATA
ATATGGTCACTGATATTTCAAACGAGAACCCTTTTCAATCCTTACCTTAT
ATAATATACTTAAAGCATATAAAAAACGCAGTTTTCCGTGGTAAAACTAC
CATAAAGAAttcaacatttgaaaatttcatatttgCATATGATTCGTTTA
TACGGATGCAAAATCTTTACTTTCACGAAACAAACCTCCAAAATGGAATT
ATCAGTAAGGATTCGTCTTTAACAATTCAAAGCATTATATTACAGAACAC
AACAGTTTATGGAGTGGCATTCTACGCATCGACAAGCATTTTCAACACAC
ATGAAATCCGAATTGTTGAGTGCGTTATTAAAAACCGCCTTGTCAATGTT
GAAGATTCGAATAATGTAACTATTCAAAACATTGAATTACAGAACACAAC
AGTTTATAGAGTAGCATTGTACGTATGGAGAAGCATTTTCAACGCAAATA
AAATCCGAGCTGTTGACTGTGTAATGAAGGACCGTCTTGTCAATGTTCAA
GATTCGAATAATGTAACAATTCAAAGCATTGAATTACAGAACACAACAGT
TTATGGATTTACATTCTTCGTAGTGAGAAGCATCTTCAACGCAAAAGAAA
TCCAAGTTGTTGACTGTGTTATGAACAGCCGTCTTGTCAATGTTCTAGAT
TCGAATACCGTAATAATTCAAAGTATTGAATTACAGAATACAACAGTTTA
TGAATTTGTATTCTTTGTATCGAGCAGCATCTTCAATGCAAATGAAATCC
GAATTATCGACTGTGTTATGAAGAGCCATCTTGTCAATGTTGAAGATTCG
AATAATGTAACaattcaaaacattgaaatacaGAAAACAACAGTTTATGG
ATTGGCATTCTTCGTATCGAGAAGCATCTTCAACGCAAATGAAATCCGAG
TTGTTGACTGTGTTATGAAGAAACGTCTTATCAATGCTCAAGATTCGAAT
AACGTAATAATTCAAAGCATTGAATTACAGAATACAACAGTTTATAGAGT
GGCATTCTACGCATCGAGAAGCATCTTCAATGCAAATGAAATCCGAGTGG
TTGACTGTGTTATAAAGGACCGTCTCATCTATGTTGAAGCTTTGAGTAAT
GTAACaattcaaaacattgaaatacaGAAAACAACAGTTTATGGATTGGC
ATTCTTCGTATCGAGAAGCATCTTCAACGCAAATGAAATCCGAGTTGTTG
ACTGTATTATGAAGGAGCGTCTTGTCAATGTTCAAGATTCGAATAATGTA
ATAATTCAAAGTATTGAATTACAGAATACAACAGTTTATGAATTTGGATT
CTTCGTAGGGAGAAGCATCTTCAACGCAAATAAAATCCGAGTTTTTGACT
GTGTTATGAAGAGCCGTCTCATCTATGTTGAAGCTTTGAGTAATGTAACa
attcaaaacattgaaatacaGAAAACAACAGTTTATGGATTGGCATTCTT
CGTATCGAGAAGCATCTTCAACGCAAATGAAATCCGAGTTGTTGACTGTC
TTATGAAGGACCGTCTTGTCAATGTTCAAGATTCGAATAATGTAACaatt
caaaacattgaaatacaGAAAACAACAGTTTATGTGTTTGCATTCTTTGT
AGGGAGAAGCATCTTCAACGCAAATGAAATCCGAGTTGTTGACTGTGTTA
TGAAGGAGCATCTCATCTATGTTCAAGATTCGAATAATGTAACAATTCAA
AGCATTGAATTACAGAATACAACAGTTTATGGATTGGCATTCTACGTATT
GAGAAGCATCTTCAACGCAAATGATATTCGAGTGGTTGACTCTACATTCC
AAGGATTGGCGGAATTAACACAGAAAAGTAATATCACCATAAAATATATA
TCCGTGAACAAGACCGATATAAGAGGAATATTTGTCCGTTCATTTAAATT
CAGTAAATCCACGATTACAAATTTAACAATTCACAAAAGCAGGATTATAC
GTACAATGTTTGTCCTTACAGAAAAAAGTAaagttatacttaaaaatgca
ACAATATTTGACACTAATGTAGGTCAAGAAATTTTATACTTGTACGAAAG
CACGGTAATACTAGAGCAATTCATCATTATACGTTGCGATATTTATGGTG
CTTTCAAAGCCTTTGAGAGTGTTAAAGAAATTGGACCAGGTATTAAGTCG
GAGTTTCTCAAAAGTAACCTCACTGTTTCGGATTTCAGGCTTTATGATAG
CCGTCTGACGAAAAATGTCTTCAATCTAAAAAATGCAGATATTTCTTTGG
AAggaattgaaattaaaaacagttATATAGATAAAAGCATATTGGATGTT
GAAAAATCTACTGTTAAACTTCGAGGATTTAGTTTAATAAACAATACCAC
TCCAGATTATGCAATTCAAATGAATAGAGTCGAAAGTGCTACATGCGAAA
ATTTCACCACACATGGAAATACCTTTTTAACTTTGATGAGAATTCAATCA
TCATATTTCAAAATCACGAATTTCAAATCAGTTCATGATAATACTGAAGG
CAAAATAGCTGTCTTCGACgttgaattttcagaattatATTTGACGAACA
GTATGTATACATTGAATTCCTTTGATAAAGGTAGCCAAATAATAAATTCA
AAGCGTAGCACCatttattttacaaaagttGACATTGTGCTACCGAAATC
ATTGTCCGTGGAACTCAAAGtttggaaaatgtttggaaaacatcATGGGC
AAATCAAAAGCTTTTCAACTGTATGCGGAAATCATTTCACCCCTCAAATT
AAAAGACTTAAATCATCGACAGAAATTGTTTGCAACAGATGTCCATCAGC
TCAATACtcaatgtataacttttttggaaagtatGAGCAAATTGGCAAGT
AAAACAAATGCCATTAAACTCAGCAAAATTGCACAAATTAAAAAAGCAAC
ATGTAAAATCTGCCCAACAGGTTCTCGCTGTCCAGATAACGATTTAATAG
CACGTGACAATTTCCATGGCTTCTATGAAAATAAAACAGCGGATTACCAA
TTCCTTTTATGTCCCGAAATATACTGTTGTTCATCAACTACAAAACATTG
CAAATCTCCAACAACTTGCAATCTAAATCGAGAAGGAAGACTTTGTGGCA
AATGTAAAGATGGTTATTTCATCAGTTTCTTCAATAATAAATGTATTAAC
ATTTCTGAATGTACCAATGGAAGTCAATATTCTTTCTGGAcgctattttt
catttctttcatcaCTTTGGCTGTGCTGTTAACATTTCTTAAAGATATCA
TCACTGCTATCAAATGTGCTGGACCGATCATAATGGCATGTTTAAGGTAA
GAAAGAATTAAATATTTGCGTACAGTTCAAAGGACACGATAATCACAAAT
TTGtaatattccaaaaattttgtaatATTTGCGGAGTGTTGTGATTTTCC
AGTTGCACAGTTTTGCGATCAAGAGATTGCACAGTTTTGTGATTTAAAAA
GTATTTGACTTATTTATTACCTTGAGATATTGGATGAGagcagaaaacaa
tcaaattaaattttttgcatTGCGAATGTACATTGctgaaaaaataatta
ctttattTATCAGCTCACTAACGTAACGATAGAAAGAGACCTCGACCTCC
TTTTTCGTTAATCTGAGTTTTAAGTATTAAAGTAAGATAATATCACTCCC
GataatattgagaattttgaaaaatcaagccagcTCTTTGCAGAGTATAC
TTGTTTTGTAACGAATGAGAATAAATTTGCACAGAATTAAGTAAGAATTA
AGAGTTCCAAGTCGGCACGTTGATTTTTGGTTTAAATAATCTTTTGAATT
GGATAATTCCTGTAAATTTCGGATTAACTCGCAATATTGCGAGCTACTTG
ATAGGACCATTTCTAGTTATTAAAAAAGGCCAATGAATAACGTTGTTCAT
aaagaaacatcaaaatctagtactgtttttgcttggaaaaactCGGAACA
TTTGGTCTTAATTCAGCTTGTTTGTAGTTGTATGAACTTGTAAGATAAAT
CACACTATATAAAGTCAAATTAAAATACTTTTCTTATACCCTTATCTTAG
GTCCcacatttccagaaaaattaaatttaccGGTTGCGCCAcagaaaaac
gttttttcacTTTAAAGTAGCTttgccctcctacatagcccacgCCTGAT
ATATatgacattggcacttaaaagGTTAAAGtagattttctcgagttcta
tggcTTTTAAAAACTTGAATTAGTCATTTATTAAACTTGGTCCTTTTCCC
GTATCTGTTCGAGTATTaggtatatatatatattatatacacAAGCATat
attaaaagattttgttcTTTTAAGTTAATCCTTCCTCTTTTGAACGCATT
ACAGTTTACTCTTCAAATGTTCGAAATAAATGAGgtcaaacttttttgtg
gcacacccggtattgAACAAAAAGTGctttaattatttaaaaaaattgca
aaagtaaACAAGGACGCAGGGATTCAATTACTAAAGTACGCATAAGAGAG
TTACAGATTCTATTTTAATACATATATTGCCCCTATATTTCATAGCAATA
TATTGCAGTGTTAGTAAAGGCAGGAGAATATTATACATTATGgaggtata
cggaaaaaaatcggtggGGGAGTTTCGAAATAAGATTGACAAACTTTACt
agctgtaaactcttttcggcaaaaagccctttttcgaattttcttcctct
tttttAAATAGTGATTTGTCATAGATTATAATATAGTCTATATATTGCCT
TGGCCATGACCTCTATAAAACAAAAGTGCGCGCTgataaattacaaaact
gcataGAAATTACAAAAATCGCACATAGCAGTACCCCTACCCCAAAAGAC
AATTTCATTCGTGGGACAAAAGTTCTCTGAATATATATTCTTGTGAATTC
CATTTTAGGAAAACTTgcacaaagaaaaaagaagaagatgcCAACGAGAT
CAATGAAATGGAAGCACTACAAGCAGGAGACAACAAAAGAAAACGTAAAG
AGATTTCAACTTCATCAatctttaatattttggtcTCTTTCTTTCAGTTG
AAAGCTTTGATAACAGTTCAGAGCAATGAAAAAACGTTAATCGATAAACT
TATGAACATGGATATTATGGTTAAAAGCAGTGATGCTTTAGATGCACTTT
GTCCTTTCAGGGGGTTTAATGTTGTATGGCGAGAGGTTTTAAACGGATAT
ACCATCCCATTTTTATTGTTAATCACTATTGCAACTTTACACTTGATTGT
AAGATTCGTGAAACACTTTCGACCATCAAGTTTAAGATTAACATGGTTGA
TAACGAGATTTTGTGTTGGGTATTATATCATCATCGCTTTTTGCTACAAA
AATATCTGCAGAACAGTCTTTCAGATTTTGAACTGCAAAACAATAAATGA
AGTAACATTCTTATACATTGACGGTACTGttgaatgtttttctttgtgGC
AGGTGGCAAATATGTTATTCTTGGTATTTTGGGTTGTTCCATTCCCATTT
GCAGTCGTTTTGGGCTACTAcctgtttaaaaacaaaaagatttctgTGAC
CACGTATctcatatttttattatttccaATGTTTTGTATTCTGAGAACTT
GTTTCTCAAGATGGAAAAGAACTGTCGAGACTGACAGGAGCGATTTCATT
GGCAACAGATTCGCAGAAATATTCGAAGAGCCCTACAGAGACAAATTCTT
TTGGTGGGAATCTTGGCGACTTATCGAACGTTTTATTGTTTCTGGCATAG
CAGTATTTCTGACGAACCCTATCTATCGCATNCTACAGAGACAAATTCTT
TTGGTGGGAATCTTGGCGACTTATCGAACGTTTTATTGTTTCTGGCATAG
CAGTATTTCTGACAAACCCTATCTATCGCATCTTATACCTGACCCCCGTC
TTTGCTTCCTTATCGTATTTCCACTTTCGAATGAATCCTTATAAACGTTC
GATGTATATTCTAAAACGATTAGATACAGTTTCTTGGTTTTGTTTATCCA
TTCATTTGTTCATCAACGGAATGCGAGCTGTTGTCTACATTTATGATGTA
CCTAATATCGACTTTATACGTCATGCACTAGAAGCTGCTAACATATTGGA
GAATTTATTTTCACCACTCTGGTATCTTATTATTTCATTCTTTCTTAGGA
AGTTGTGtgaaaaatgtttgaatttttaaatgttATATAATGGAAACTTT
CTCAGCAGTGCTAGCCTTTTTAGCTAGTATTTTTAAGACAAATACTGATA
AGAGCCTACTCTTAGGTGCCTAATAAAGGCCCCcctcttgtttatttttt
taaatttcttttccaaccccggaccttattaggacc

Coding sequence (CDS) from alignment at sc0000697:110824..128009+

>TCONS_00028681 ID=TCONS_00028681|Name=TCONS_00028681|organism=Clytia hemisphaerica|type=CDS|length=2112bp|location=Sequence derived from alignment at sc0000697:110824..128009+ (Clytia hemisphaerica)
gaaatataCAGAATTTTGGGGAAAACTTgcacaaagaaaaaagaagaaga
tgcCAACGAGATCAATGAAATGGAAGCACTACAAGCAGGAGACAACAAAA
GAAAACGTAAAGAGATTTCAACTTCATCAatctttaatattttggtcTCT
TTCTTTCAGTTGAAAGCTTTGATAACAGTTCAGAGCAATGAAAAAACGTT
AATCGATAAACTTATGAACATGGATATTATGGTTAAAAGCAGTGATGCTT
TAGATGCACTTTGTCCTTTCAGGGGGTTTAATGTTGTATGGCGAGAGGTT
TTAAACGGATATACCATCCCATTTTTATTGTTAATCACTATTGCAACTTT
ACACTTGATTGTAAGATTCGTGAAACACTTTCGACCATCAAGTTTAAGAT
TAACATGGTTGATAACGAGATTTTGTGTTGGGTATTATATCATCATCGCT
TTTTGCTACAAAAATATCTGCAGAACAGTCTTTCAGATTTTGAACTGCAA
AACAATAAATGAAGTAACATTCTTATACATTGACGGTACTGttgaatgtt
tttctttgtgGCAGGTGGCAAATATGTTATTCTTGGTATTTTGGGTTGTT
CCATTCCCATTTGCAGTCGTTTTGGGCTACTAcctgtttaaaaacaaaaa
gatttctgTGACCACGTATctcatatttttattatttccaATGTTTTGTA
TTCTGAGAACTTGTTTCTCAAGATGGAAAAGAACTGTCGAGACTGACAGG
AGCGATTTCATTGGCAACAGATTCGCAGAAATATTCGAAGAGCCCTACAG
AGACAAATTCTTTTGGTGGGAATCTTGGCGACTTATCGAACGTTTTATTG
TTTCTGGCATAGCAGTATTTCTGACGAACCCTATCTATCGCATNCTACAG
AGACAAATTCTTTTGGTGGGAATCTTGGCGACTTATCGAACGTTTTATTG
TTTCTGGCATAGCAGTATTTCTGACAAACCCTATCTATCGCATCTTATAC
CTGACCCCCGTCTTTGCTTCCTTATCGTATTTCCACTTTCGAATGAATCC
TTATAAgaaatataCAGAATTTTGGGGAAAACTTgcacaaagaaaaaaga
agaagatgcCAACGAGATCAATGAAATGGAAGCACTACAAGCAGGAGACA
ACAAAAGAAAACGTAAAGAGATTTCAACTTCATCAatctttaatattttg
gtcTCTTTCTTTCAGTTGAAAGCTTTGATAACAGTTCAGAGCAATGAAAA
AACGTTAATCGATAAACTTATGAACATGGATATTATGGTTAAAAGCAGTG
ATGCTTTAGATGCACTTTGTCCTTTCAGGGGGTTTAATGTTGTATGGCGA
GAGGTTTTAAACGGATATACCATCCCATTTTTATTGTTAATCACTATTGC
AACTTTACACTTGATTGTAAGATTCGTGAAACACTTTCGACCATCAAGTT
TAAGATTAACATGGTTGATAACGAGATTTTGTGTTGGGTATTATATCATC
ATCGCTTTTTGCTACAAAAATATCTGCAGAACAGTCTTTCAGATTTTGAA
CTGCAAAACAATAAATGAAGTAACATTCTTATACATTGACGGTACTGttg
aatgtttttctttgtgGCAGGTGGCAAATATGTTATTCTTGGTATTTTGG
GTTGTTCCATTCCCATTTGCAGTCGTTTTGGGCTACTAcctgtttaaaaa
caaaaagatttctgTGACCACGTATctcatatttttattatttccaATGT
TTTGTATTCTGAGAACTTGTTTCTCAAGATGGAAAAGAACTGTCGAGACT
GACAGGAGCGATTTCATTGGCAACAGATTCGCAGAAATATTCGAAGAGCC
CTACAGAGACAAATTCTTTTGGTGGGAATCTTGGCGACTTATCGAACGTT
TTATTGTTTCTGGCATAGCAGTATTTCTGACGAACCCTATCTATCGCATN
CTACAGAGACAAATTCTTTTGGTGGGAATCTTGGCGACTTATCGAACGTT
TTATTGTTTCTGGCATAGCAGTATTTCTGACAAACCCTATCTATCGCATC
TTATACCTGACCCCCGTCTTTGCTTCCTTATCGTATTTCCACTTTCGAAT
GAATCCTTATAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_016267	XLOC_016267	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00028681-protein	TCONS_00028681-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00028681-exon-sc0000697-1491911889:110824..110845	TCONS_00028681-exon-sc0000697-1491911889:110824..110845	Clytia hemisphaerica	exon
TCONS_00028681-exon-sc0000697-1510915933:110824..110845	TCONS_00028681-exon-sc0000697-1510915933:110824..110845	Clytia hemisphaerica	exon
TCONS_00028681-exon-sc0000697-1575043694:110824..110845	TCONS_00028681-exon-sc0000697-1575043694:110824..110845	Clytia hemisphaerica	exon
TCONS_00028681-exon-sc0000697-1491911889:126582..128009	TCONS_00028681-exon-sc0000697-1491911889:126582..128009	Clytia hemisphaerica	exon
TCONS_00028681-exon-sc0000697-1510915933:126582..128009	TCONS_00028681-exon-sc0000697-1510915933:126582..128009	Clytia hemisphaerica	exon
TCONS_00028681-exon-sc0000697-1575043694:126582..128009	TCONS_00028681-exon-sc0000697-1575043694:126582..128009	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000697	supercontig	sc0000697:110824..128009 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.000199682	0.12369	0	0	0	0	0	0.669666	0.448529	0.243304	0.266074	0.465309	1.66096	0.763927	1.49278	1.2468	0.324955	0.470653	0.222291	1.01315	0.326904	0	0	0.30511	0.10384	0	0	0.133955	0	0

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00028681 vs. Swiss-Prot (Human)

BLAST of TCONS_00028681 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00028681 (transcript) - C. hemisphaerica