TCONS_00028688 (transcript) - C. hemisphaerica

Overview
NameTCONS_00028688
Unique NameTCONS_00028688
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length179

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00028688 ID=TCONS_00028688|Name=TCONS_00028688|organism=Clytia hemisphaerica|type=transcript|length=179bp
TTATGGCCGTTTACGGTACTAttcttttgatagaattatGCTACAAGTGG
CAATACAGACAAATTTTGTAGGACACGTTTTTGCTGGAATACTCCTGATT
TTGTGAACCTGTTCATCAAAGATCAACCGATGGGTTCATGACATGATACG
ATGCTGTTACAAAGCTTGGccaatttttt
Run BLAST on NCBI

transcript from alignment at sc0000697:5229..5407

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00028688 ID=TCONS_00028688|Name=TCONS_00028688|organism=Clytia hemisphaerica|type=transcript|length=179bp|location=Sequence derived from alignment at sc0000697:5229..5407 (Clytia hemisphaerica)
aaaaaattggCCAAGCTTTGTAACAGCATCGTATCATGTCATGAACCCAT
CGGTTGATCTTTGATGAACAGGTTCACAAAATCAGGAGTATTCCAGCAAA
AACGTGTCCTACAAAATTTGTCTGTATTGCCACTTGTAGCataattctat
caaaagaaTAGTACCGTAAACGGCCATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016271XLOC_016271Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028688-exon-sc0000697-1491911889:5229..5407TCONS_00028688-exon-sc0000697-1491911889:5229..5407Clytia hemisphaericaexon
TCONS_00028688-exon-sc0000697-1510915933:5229..5407TCONS_00028688-exon-sc0000697-1510915933:5229..5407Clytia hemisphaericaexon
TCONS_00028688-exon-sc0000697-1575043694:5229..5407TCONS_00028688-exon-sc0000697-1575043694:5229..5407Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000697supercontigsc0000697:5229..5407 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00028688 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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