TCONS_00028701 (transcript) - C. hemisphaerica

Overview
NameTCONS_00028701
Unique NameTCONS_00028701
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2429

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00028701 ID=TCONS_00028701|Name=TCONS_00028701|organism=Clytia hemisphaerica|type=transcript|length=2429bp
tggaagagcccattacaaagcaaaacaaagGAATGGAAATGTTCTCTTTT
CTTGCTctgaaacgttccgaaaccgatatgaacactctcgatctgTAACG
TAAACCATACCGAAACGATACATAAGCGTAACGTTTCAACATGGCCTAAA
GGTCAGTACTTACCCCTTACAATTCACATTCTATTTTCACCATAGAGATG
CTTTGCTGATAAGTATAATAGATGCTTTGACGAGTATTTTCTCCGGTGTT
GTCGTGTTTACAATCATTGGTTATCTAGCTGAAGTTCAAGGAAAAGAAGT
TGATGACCCCACTATTGCTACTGACGGACCTGGCTTAGTGTTTATCGTTT
ATCCGGCTGCCTTGGCAACGCTACCACAACCACAAATATGGTCTGTAGTA
TTCTTCTTGATGTTAATCACACTGGGTTTGGACAGTCAATTTGGTCAAGT
AGAATTGATTTGTGCAGCCATCATTGAACAATATCCTGAGAAGTTAAAGA
AACGAAAAGAATGGGTTGTTCTTGCAGTTTGTGTGCTGTTGTTCTTATGT
GGATTAATATGCATGACCAGAagtGGGATGTATTGGTTCAACTTGATCGA
TAATTTTTCTGCTGGTATATCTCTTCTCTTCTTGGGTCTTTGCGAATTAA
TCACCGTTGGATGGATATTTGGTGCTAACAATTTCCGCACCCAGATTGAA
TCGTTGGTTGGATTTCAAATCTCTTCATTTTGGATCATAATGTGGAAATT
TGTCACTCCTGTCATTGTTACCGCCATCTTCTTGTCGAGTCTGATCACAA
ATAAACCTTTAACATACGAGACTTATATGTATCCTGATTGGTCACAAGCT
GTTGGATGGTTGATGGCGATCGCTTCGATGATTTGTGTGCCCGTTGTTGC
TCTTCTTTCGTGGCATAGTGCTGATGGAAATACAAGCCGAGAGAAATTGA
TTGATTCCATGAGTGCAGTGGATTGTTTCAAAGTTGACAAAGATGCGGAT
GTGCCCTTGTATGCTGTCGAAATGTAAAGTTAAAAGAAGATAGAGCACTG
TGAATTTTATATAAAACTAAAGGGAGTTTCTTAATCACGGATTATCAAat
tctttgatcagagttttttgaaagtgttaCCCTGAATGGCACCAATAATT
TATAGCGTTGTTAATGCATCGACATCGCTATAAATCTACTTCTCGCTACA
ATCTTGTATGCTGTTTCGCTAATCAATGGCCTTTATGTGGTCACATTACT
TCCTGCATTAtactttttaaagaatttggttcaaagatggcggatatagc
tttgtTGAGCGTTTTAATAGAGGTCAATGTCTACCGTCGTTTTGACGATT
CCCTTTTCCGCTCTAAGATTCCGCTACCACTTTTCTACCGCGGGAAAAAG
AGGTTCGGGATTTGTAACTGTCTCGTAACTAAACCATAGATTTAagaagc
ccgaagggctagatgtcgtgctttaagtcATCGCAGGCAAAAGAAAGTga
atagcaaaaaaaatattgttacttttgttttcgaaaactcgcgaagcttc
tgattggtcacgtgacttaggtaggatttcctacctaacatCGGCACACT
TTCCAGCTAAAGCTTcgcatctagcccttcgggctttataaatctatgaa
cTAAACACAAGGttttccgtacctttagaaaaAAACTCTTTCCGATCTCA
TACCGGCTATCCCTGGAAAAATAACGGAAAAATCCTGGAAAAGTCAGCAG
AATATTAGAGCGAGAAAGGGAATCTTATGCAAAATGACGGTAATACCTAG
CACTGCGTTTGCGTAATACTGACAAAGTATGACTTCCACTAGCACTACTG
ActacaaaaatgagtttgtaCGTGTTGTTGTGTATTTCGTATTAGGCGAT
CAAATTTGACAAAACATTTAGTATTCTTCCCTCTTGGGGAGGTAATTGTG
ACCTTTGTTCGAAATTCTTTGCGAGAATTCAGCTTTTTGAGGAACCGCAA
ATTGGTGTGGTGagactgaaattagattttgtgGATTTTTTGATCCGTGC
CATTGTAGGGTTTTTGAAGATCTAAGAAACCCTGACTCTATAAGAAAATG
GTTTCAGATTTTAAGTGAAAAgtgcgaaaaaattttggaGAAAGGGAAAT
TTGGAAAAGTCCTATAGGAAATTAGGATTTAATATGCTTAGGTTTTATAT
GCTTATCTGATTAGTATTTTGATAGTTTAATAgggttttacttttttttc
ttgtATTCTTAAAAACTAAGGTATAGATATATTTTAATCGAAATTGatct
taaattttataaaattgttaatatattttttaattcaaaattattgAGCT
TGTTCCCATATGCTTTTATATATATTCAGTGTAAATATGacctatatatt
tttttgaccTAAAGACAGATTTTAAATAG
Run BLAST on NCBI

protein sequence of TCONS_00028701-protein

>TCONS_00028701-protein ID=TCONS_00028701-protein|Name=TCONS_00028701-protein|organism=Clytia hemisphaerica|type=polypeptide|length=205bp
MLITLGLDSQFGQVELICAAIIEQYPEKLKKRKEWVVLAVCVLLFLCGLI
CMTRSGMYWFNLIDNFSAGISLLFLGLCELITVGWIFGANNFRTQIESLV
GFQISSFWIIMWKFVTPVIVTAIFLSSLITNKPLTYETYMYPDWSQAVGW
LMAIASMICVPVVALLSWHSADGNTSREKLIDSMSAVDCFKVDKDADVPL
YAVEM
Run BLAST on NCBI

transcript from alignment at sc0000698:74747..92202+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00028701 ID=TCONS_00028701|Name=TCONS_00028701|organism=Clytia hemisphaerica|type=transcript|length=17456bp|location=Sequence derived from alignment at sc0000698:74747..92202+ (Clytia hemisphaerica)
tggaagagcccattacaaagcaaaacaaagGAATGGAAATGTTCTCTTTT
CTTGCTctgaaacgttccgaaaccgatatgaacactctcgatctgTAACG
TAAACCATACCGAAACGATACATAAGCGTAACGTTTCAACATGGCCTAAA
GGTCAGTACTTACCCCTTACAATTCACATTCTATTTTCACCATAGAGATG
CTTTGCTGATAAGTATAATAGATGCTTTGACGAGTATTTTCTCCGGTGTT
GTCGTGTTTACAATCATTGGTTATCTAGCTGAAGTTCAAGGAAAAGAAGT
TGATGACCCCACTATTGCTACTGACGGTAAGTGGGCGTGAAGAGGTCGTG
GAAAGGTGTAAGAGGGTGTTTAACAAGCTgagttttaaggaaaagaaGTT
GATGATCCCACTATCGCTACTGACGGTAAGCGGGCGTGAAGAGGGCGTGG
ACGGGTGCAAAAGAGTGTTTATCTGGCTGAAGCTCAAGGAAAAGACTTTG
ATGACCCCACTATAGCTACCGACGGTAAGCGGGCGTGAAGAGGGCGTGGG
TGGATATAAGAGGGTGGTTATCTGGCTGAAGCTCAAGGAAAAGATGTTGA
TGATCCCACTATCGCTACTGACGGTAAGCGAGCGTGAAGAGGGCGTGGAC
GGGTGCAAAAGAGTGTTTATCTGGCTGAAGCTCAAGGAAAAGACTTTGAT
GACTCCACTATAGCTACCGACGGTAAGCGGGCGTGAAGAGGGCGTGGATA
GATATAAGAGGCTGGTTATCTGGCTGAAGCTCAAGGAAAAGACGTTGATG
GTCCTTCTTTTGCTACTAACGGTAAGTGGGCGTGAAGTGAGCGTAAGAGG
GTGTAAAAGAGTGGTTATCTAGCTGAGTTTTAAGGGACATATGTTGATGA
TCCCACCATCGCCTCTGACGGTAAGTGGCGTGAGGAGGGTGTAAAAGAGT
GGTTATCTAGTTTTAAGAGAAAGACGTTGAAGATTCAGCTATCGTTACTG
ACGGTTAACGTGTGTGAAAAAGGCGTAAGAACGTGTAAAAGAGTTGTTAT
CTCACTAAGTTTTAAGTTGATGATATCACTATTGCTACTGACGGTAGGCG
GGTGTGAAGAGGGCGTAAGGGGCGTAAGATGGTTGAAATAGAGCACAAAG
AAGGTGTTGAGGAGGCTGGTTATCTAGCTAAGTTTCAAGAGAAAGATGTT
GATGGTCCTTCTCTTGCTACTGTTGGTTAGAGAGCGAGACGAGGGCGTGA
GAGGGTGTAAAAGATCTAGCTGCAGTTCAAGGATAAAATGTTGATGACCC
CAAAATCGCAATTGATAGCACGAGGGTGAGAAGAGAATGTAAGACGGCTG
GTTAATATGGCTATCTGGctgaatttcaagaaaaatatgttgacGATCTC
ACTGTTGCTAACGATAGCGAGATGGCAGGTTAAGGGCGTAACAAGGGCGT
TTTTATCACCACACCTCATACTATGTTCACAATTCGCGACCATTTCATTA
AATAGGATAATATGGTTTAAGAGGATAGCTATTTGAAGCTCAAGGGTAAC
TTAAAAATGGGGTGAGGTGGACGAGGGCGCGAAGATGGTGTACGAACAGT
GTGTTTATGTTCAAGGAGTGACGTTGGTCATCGAACTCTCATCACTGATG
GTAAAGGCAGGCGCAAAGTAGGCTTTGAAAAAACAGAATAGATAGTTAAA
AGCCAAAATGCACGAAAAATGAAAGATAAGAGTcttaacaaacaacaaaa
ttctaCCATTTTTGACTCACTTTATAGTTTATGCCTGATTTTTTTAGTAC
TAGTAACTTTCTTTTCTTATAGGACCTGGCTTAGTGTTTATCGTTTATCC
GGCTGCCTTGGCAACGCTACCACAACCACAAATATGGTCTGTAGTATTCT
TCTTGATGTTAATCACACTGGGTTTGGACAGTCAAGTAAGTTTTATTACT
TTCACTGCAATGTCggtcaaaaaaaatatatcggGAATTTTGGTTCATTC
CTTGTTTTCAGCaattaaaattgataaatttattcgaaaacCACAATTCG
GGATAGCGgcttatagacttccaggctatattccgAGCCCTtttggacca
ttcttggacttttagttcctcagatcctaaggttttaagtcttaagtcta
gcgttagactcagagttaaaactctacccgtcTAACccaatttagagcgc
ttccaaattgtttgtggttgtaagaatttcccttttttctcaaatattat
gactttgattgtggtttatatatacatttttttcaaacgGTGCAAAAAGG
AATAAATTAGAAATTATAATGAAATCAAacttacttaaaaacaaaattaa
tttacttaaaaactaaatttactTTAAAATCTGGATGGAAACCACTCCTA
ACGATAAAAAAACTCCTGAAAGCTCCTGAATCATATTTAATTCGACCATC
TTAGATTTGTcgctattttattagtttttgacgGTTCGCGTCATATAAAA
ACCGGCTCTATCGTTCGAAGTGAATTCAGACGCTTAAGTAAATTCGTTTT
AATAAAAGTTAGTAACTTAACTTCAATAATTCGAACGCTACAGTTGGATA
TGAAGACTCATATGTGTATTAGATATGTATTAAACAGTAAAGTGTGCTAA
GCACAGGTTTTATTGTAGTTTAGaaatattataaattttcaataaaggCC
GTGTTGTTTGATCATTTTTAGCAGAAATCAGACACCTGGGACTTTGTCAT
TCATATAAATTTGAGTAGATTTTAGTTATTAAAAACATAATACTTATTAG
cttattcaaaatatttaatcGTCTGTCAAAGCCATTCTATATACTTTCAA
TGTGTGCGTATTAAAGTGTAGCCTTTAAAGTGCGATCGTTTGTTCATTTT
TTGGACTGTCCGCTCAAAACACCTTCATCGGTTGTTTCTATATCGGTTGT
CGTTGTCGGTAGATTAGCAGAGGTTGTCGGCGGGTTTGTGGCCGTAGTTG
TTTTTGATAGATTAGTTGTCGTTGGATTCGGTGGATTTTTCGTTGTCGTT
GGATTCGGAGGATTTGTCGTTGTCGTTGGATTCGGTGGATTTGTCGTTGT
CGTTGGATTCGGTGGATTTGTCGTTGTCGTTGGATTCGGTGGATTTGTCG
TTGTCGTTGGATTCGGTGGATTTGTCGTTGTCCTTGGATTCGATAGAGTT
GTCGTCGTCGTTGGATTCAGTGGAGTTGTCGTGGTTGTTGGATTCGGAGG
AGCTGCCGTCGCCGTTGGATTCGGTGGATTTGTCGTTGGCTTCGGAGGAT
TGGTCGTTGTCGTTGGAGGATTTGTCGTTGTTGTTGGATTCGGTGGATTT
GTCGTTGTCGTTGGATTCGGAGGATTTGTCGTTGTCGTTGGACTCGATGG
AGTTGTCGTCGTCGTTGGATTCGGTGGAGCTGTCGTCGTGGTTGGATTCG
GTGGAGTTGGAGCAGTTGTTGTCGTTCGATTCGGTGGAGTCGTGGATGGT
TTTTCTGTTGTAGTTGTTTGGTTTGTTGCCATTGTCGGCAGGATGCTCGT
GCTCGGTGAAACAGTGTTACTTGGAACATGTTTCGACGAAGAAGGCACTA
TCATGGTGGTTGAAGGGCAAGTGTGAACGGTAACAGTCGAAATATGAGCC
GAACATGGAATACTGGATGCCGTCAATATTGGTTCAAGTGTTTCAGTATT
GACAGTAAGTGATTGTGTACTGGTAATGGAGGTGCTAGATGATAAGATTG
GTGTAGTAACAGGACTTTCAGTGGTTGTGTTACCGAATGTACAGTTTCCA
TAAAAAGTACAATTCGAACAATCTTCGACTTTCTTATCCAAGTGAAAACC
ATAATCCACTCTCCTGTATACCCCGCTGACGTGACACCTACATCCGAATC
TTTTATGGCTCAAAGTCATGGTGTAGGGGATAGTGACAACAGTTTTGTTA
AGGTAGACATTACATGTGACAAAAGTTTCTGCATTTGCACGACAGCTGAA
TGTGTCTGTGATCTCGTCGGTTACGCTCTTATCCTTCCCGGTTGTACGTT
CCTCGTTGTTTGTCAAAGTGGAGCTGATTTCACCAGAAGCAACATCAGGG
ACTCCAGTTGTGTATTTGACACCACTCTCTAAAGATACTGAACTACGTTG
TGAGAATGATTCCGTAAAAGTGACGCTTTCTTTAATCGACCGGGTTGTTG
GCTCCGAGGGAATCTCAGAGTCACAGTTATTGATGGTGATAGTCGGAACA
TGTTTTGTTTGTGTTCGTACGACAGTACCTTTAGCAGTATCATAATCAAC
TTTGATAACACTCCAAAGATCTTTGGACAGTGTTCCGGTACATCGACAAG
CTCTTCTACGACAACGGCGATGGTAAAGCGATCCACAATAATGATACCGT
CCGCGATGTTTGCACGTGCATCGAGAAGGATCCTTCTCCGTCGCGTCACA
CAACGCGTCTATTACATCACCCCAGCTTGAACTGTCAGCAGATTCGTCAC
GCTCGTGGTAATCGCATGACTTTTCTTCGCAACATTCGTGGACTATACTT
AGGGTGTTTCTTCTTTGCCGCGATTTTATAAACATGTGTGCTTCGTGTTT
TGAAATTAACGGATTTTGGTTTGGTTTGCTGTTTGCCAAGATTCCATGTA
AAGTATACAATAATGCCAAGGCGAATACTGCTTTTCCAATCATCTTACAC
ATCTAtccgtctgaaaaaaaaatcaaggaaagttatttttcagggtaaaa
aagattttttcagctgCTTTACAGAACAAGAACATggaaaaatttccagg
aaggAAGAATAAAGTTTgagataaagaagaaaaagaattatacattttat
tacaaaaaaatcTTCCTTTGAGGTTGAAGCTTATCTTATTGTGAGATCCG
GAGAAAATATCGCATAGACCAAAATAGTAGCTTATCGGCCTTTCCTTACG
CCGATCCTTATTCCGCCGCTGATTAATTTTGAGCTCACATCGGTTAGGGC
TGTAAATAATAGCGAAATCCTTAAAACTCACTAGTTGGTTTGAAAACAGT
AAAATATGGTAACAGTAGCGTGGTGACAGGGGGCAGGGGGAAGTGCTAAT
TGTTGTGTTAATTGTTGACAATTTCATCGGAGGTCagtttttttctcgaa
aaatggGTAATGAATCATCCTTTGATGGTCCTTTAAGCCCTGTCCTTTAA
TCCGCCAATTGGGATCCGTGGCATAAAGCTGAAACAGTCGACTACGGTAC
GCCAAATTTTGGATTCAATGCTTAGACAGGTCACACCAAAGATTTAcaga
aatttgatttaaatgatgatgctcagcaattaaagagaagGGTTAAGGGT
AAGTAGAGCAGTCTAGGGAAAGGAATGACGCCCTCGCCTACCTCTGGGTA
GACTGCTAATATAGAAAAAGAAGCCTTTGGGTCGCCATTTAACTGCGGTC
GTAAACCTACTTACTTATGAAAAACACAACACATGCCCCCTactatttag
aataaaattcaaaatagtcAGGTTGCATAGATGAAACAATCTCCTACCTT
TTTCCTTGCTTGGCAGTTGTGTAGCTTAAATGATGCTTTTCTTGATAGCT
CCTTGCCCTTTATATATCGATGAAAAGATAAGTTAAATCATTGTCTGAAA
AGGAGTGGGGTAATGACTCATTGATGGTTGTTGGGCCATGCtttcctttc
atttttatagttagatgaaaattattttcttccaCAATTCAAATTCACTC
TTGATAATCAGATGGTTACAGGACTATACTTTTAAAGGGATATCGTTGCT
AAGTAAAATTTATCAGTAAATAAACATATTTTTGAATAATACACGAGGTC
ATTCTAAAAAGATCGAAAACAAGGAAATCCCaaataacaagctagatgct
gaatggacctacctgataatgaaagttagatagtaataagtagaaaaatg
aaaactatcagtcagaaaatatagcgttcaTAGCGAGAATGCAAAATgcc
ttaaattttatcattgattgttgatgggagGAGGGAAGAGaagtagggaa
aaaagaaatgaaagttCCAGTTGCAGTTGCAAAAATGAGTTTTATTGATA
Attaaatcatgcttgatggttggcattgttaaaaaatcggggaaaactaa
tgatgaaatctcgagaaaatgccaaaaaacggttttccggcatatttccg
gcattttcggccggaaaagaattttctcaaaaattagatttcatggaaaa
atataaagtacacctcgagaaattcaagaaaaaccgttttttccgGCGAT
ATTCGGCTGTCCCGGCGATTTATAGAAAGttctggcttcaaaaatcagtt
ttattgacaattgaaccatgcttgatggtgggcattgtaatctataatgt
ttttgtgtgaataaaACAAAGAGATTTAAGGAAAAGgaacaatgaaaatc
tgcaaaaagcGACGATTTTCGGCATTTTTCCGACATTTTCGGTCTGAAAA
GAATTGttctcgaaaatcggactcggccatgttttgggcattgttaatat
gaatctttgagcaaaagaaaaaatcagaaaaaacaaatgatgaaatctcg
agaaaatgccaaaaaaccgttttttactGGCAtatatgagaatttttttt
cggaaaatcgaTCTCCGTTAcatttgggcattaccattttgcatctttgt
gccaaaaatcaggaaaaactaatgagccaatctcgagaaaagttgataac
gaacgaacgaacgaacgaacgaacatcagataatttataggacctccagg
taggttaAAAAAGAGTATTCGGACTCATGTACCTCCCAGGTGGCtgacaa
cgttgtttcaacgtttatcttatattcaaaacgtccatataacgttaatt
aaacgttgaaacaacgttgtgtaccagctgttTACAACCTAGAAACTGTT
TTGTTAAAGTATGAGCTGGATTAGCCTGACTAAGGGTTGTATCTTTGTTT
ATTACCCACGCTCGAAGGAGTCTCTTGAATTATCTAGTATGTTTGCACCA
CGTTGCTTTTTTTTGACTAGTATGTGGACACAATCTGATTGGATCTCAGC
CAAGAGCTGATTATGATATTGAGCATGTGCTGCGGGGGCAAGCTCAATCA
AAGACACTTTTGCAAATGCGCAAAGCTCCTAGATTAATTAGGCAACCCCT
GATAACTGTACAGTGTTTTTTAGAATTAGACAATAAAGCTAGAGCTGCTG
GACATAAGAGAAACGTCCAGTGgagttttacttgataaaattTCATTGAT
TTGTACAAATCATAATATTATAAAGATATCTCCATTAATGATTGCCATCC
CGTTTTGATAATAAATTGATGCATTTGTGTATAAttaattacacgctttt
ttaattCCAtctcatcatgaatattcttacggtattcttaggttcgGATT
AGAACCCGGCTAAATGTAGAATGGAACACATACCTTATGCACAAAACTTG
GCATATTTGTGAAACTTTTTAGCATTGCTGGAAGATAATTAGCAATTTGC
aggtaaaaatgctctaaaaatggtatTGTGAGGTTaagtagccaaattcc
atgacGGTGTAATTCTtagtatattcttaatttttggccaatttcatcat
gaatatttttataaagtattcttataaaagatgcGTGTAATAACATCTTC
TGAGAATTCTGCTTCCAAGCATTGCTGATAGTTTCATCTAAGAAATGTTT
AGGAATTTAATTGGTGGATCATTAATTAAAGTATTTATTCCTGTTATAAC
GATTCAGAGAAAGGGTAGAGGAAGGGTCTGACCTTTAGTTCTCACGATCT
ACATAATTGCTTACGATATTTCCATAGAAGCGGTGtacccatagatttat
aaagctcgaagggctagatgtaaagcttttgctgaaaagtatGCCGTGGT
TAGGAAGGAAATCATAcgtaagtcacgtgacattacaatagaatttcagt
gattgaccaatcagaagcttcgcgggttttcgaaaacaatagcaacaata
ttctttccgatattcactttttggacctacctccgggtaccccggtggag
gttctataaattaacccatgtccgttcgtccgtccgtccgttcgtccgtc
cgtccgttcgtccgtccgtctgttaccagcttttctcaggattggctcat
tagttttttctgattttttgcacaatNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNcatgttgcttgtttttgcCTGTGATGGCTTAAAGCCTGACATCT
AGCTGTTCAGGCTTTATAAATTATGGGTGTACCCTTTATCATATACTTAT
AATCTGTAttagaaaataaacttttttaacgAGTCCGTTTCTCGTCACGA
AGCATACTGATGGAATATTCATCAAAATCTTTATCAGTCATTCAATCATA
ATTTCAAATCGATAAAATCATGTTTTAAAGCGATCTTATCGAGATTTCTC
TAAAACAGATTATCTCCGTTACACAGACTGTAAAATTTAAACGACAgaca
ttgaaattattttatacTGGCTTTTAATGCCCATGTTTTATATCCGGGAG
CTTGTCGAGTATGTGCTGACGGGACCctttttttgcgaaaaagtTACACT
TCATGTACAGATATAAGATTGGGTCATGGTTTTCCTACCcgtaaaaacat
ccaaaaatgaagaaatcctGACCCTTTGAGAAACTAGAGAGATTATTTTG
ACTTACTATCAAACTGCTCAAATCATATCAAATTAGAGGGGGTTCGTTCA
GCCTAGCCCCTCTATGGTTTTAAaataagtctgcgaccgcagtcggaggc
gacccgaaagCTCCTGTTTTGGCGAAGACGAAGTCTTTGAAATAAATGCG
GTTGACACATATATTTTAAGCTAGAAAAGGAAAAACACAAACTAATTTAG
AACTATATACAAACTCGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcaaaaatatacaaatgt
ACAATACAAAACTATACTTACAAATTTCGTCACATATATTCACGATTGAA
TGCCAAAACAAATGCACGATAtgcaaaaatcccaaaaatatCTAAAAGTT
CGAACGAAACTCAAAACATTTCTGTGTTAATAAATTCGAGAACGATTTTC
TCTGACACGTCTCATTTCAACAAGTTTCTCAAGTGAAGTGCAAAAAACGG
CGATGGAAAAAACCTATACagtaaaaaactaattaaaaatagacaaaaga
cGCACGATACAATACACATGACGATACGCACAACACATACATAACACTAA
AATGCTAATTACCCAACGCAACATCATTAATTAGCCAAAAcagctcctct
ttcgatagttatctacccgaaggtaggggagggcgccactctatCTCCCT
GGATCGtcccacttacccttgatccttctcttaattgctgagcatcaagc
agagaggcatcgagtaccattttgagaatctttggtatgatccggctggg
ggttgaatcCATAACCTTGCGAACcatagccggatgctctaccactgcac
tacggtcgctttaAAACCAGGGTTTTAAAGGAACTTGAAACCAATGCATA
CTAAGGAATAGTGCTTTACATTTTTCGGTCCTTTCGATGATGCTTTCCTA
CCTGTTACCTCCAAAACTGAAGTTgctcaaaaaaagtttctctgcAAGGA
ACGTATTTCTTCTTGTCACTGTTAGAGAAAAGCTCACGAAAATTTACTTT
GAGATGagaaaaacatacaaaaatatacaaattgTACTGTTTCTGTCACA
ACCCtcttaaaaaattttctgaacaGTTAAAGTGAAATCGTTTGCTTTCT
CACCAATTttattttacaagtttttttaaattgaattgacacggatgtgg
agcaagattggtcagaaagaggagaagaaaaacatattttatttatatat
atatttttttaaatctatataTGTTGGCATGGCTCATTGATTGATAATAT
TTttacttatatcagcataacataacaataggcagacactgtcctgatgt
gaaatatgtgtctgatatgaaatatgtgtctgatataaaacgggaacact
tctgtaaaaataaaacctttaataggCTGCTCAAGTTTCTGTAAATCATG
ATTTTTTAAAGATCTGTGATccagaaaaataattattggttgttttcttt
ctgtGTAGTTTGGTCAAGTAGAATTGATTTGTGCAGCCATCATTGAACAA
TATCCTGAGAAGTTAAAGAAACGAAAAGAATGGGTTGTTCTTGCAGTTTG
TGTGCTGTTGTTCTTATGTGGATTAATATGCATGACCAGAGTGAGTTTGA
CCATTATATGCCTTTGTGAAATTATGGTGACATTTGCAACTACGAATCGG
TTTTCCTACTTTGTTTCATaaagttttcgttttttttttttaatttttgg
aaacgTTTTTAGCTGTTGAAGGAAATATCACTCGTTTTGCTctaatagcc
tgattttagtctATATGTGTATCTTTCTTGGCGTATTTAGCAGTGCATTT
CCCCACTCGCTGGCAATGAAAACTCGAACTGTTTTTTATCAAGTGTGAGA
ATTTTTTCAACCCCTGCTTTCATAAGCAACTAAGGGTAAGCCGATTCACT
AGTAGTCTCCGGGAGCTGGGGAGTCACTATTTAAGTGGGTTAAATTtggc
gtggattaattttcgcgactTTCGCtaattttagcccttttcgcgaaaat
tagtccttgcaaaatattcaaaatcaagattttggccgaagcccctagga
aaatgaaataaattggGTATAAAAGTGTCAGATTCGCGAgattttgtcca
cgcgaaaattttagattctcaattcgcgaaaaaaaggccacgcgaaaatt
tatccgcTTAACATATCATCTTATAGCACATTAGAGTTCACAAGTGTTTT
AGACCTTGAGGacgattttctcgagttaacTATTTAACTTTCGAACTATT
TTCAGGCACAAAATGTTGCAGAAAAACGGGCTTTTCTTCATGAAAAGCCC
AACAACGAAtttattattattcaaattttagagtGGGATGTATTGGTTCA
ACTTGATCGATAATTTTTCTGCTGGTATATCTCTTCTCTTCTTGGGTCTT
TGCGAATTAATCACCGTTGGATGGATATTTGGTAAGATACTGGTGTTAAT
GactctacagggtgtcccgaaaaagtATCGAGTCTACAGAAAGGAAGttt
ttgtgtgtgtttcactaaatttgcaatgtttatcaaagtttctctctgta
TCATAATAATTGCCATgagacttttacaaaaaacaattctcaataacttt
aacgtcgtgaagattgtaaagaaagttaattctttttaatcataatgact
gttgtaaaaacaactATTGTgctggtatatattttcttatattttgttaa
acacatgcaacaaccttctactcagaattATGTTCGAACTCAAtcctttt
ttcgggacaccctgtacagcaCTGAGAAATTATAAGCTGGCTtacaatac
actcttctcgagatgcataaatttattgttgtcctcgttttcaaacagaa
ttcattgctatgaaattatacatttaaaccaatttaaatttccaaaaggc
aaacattaactctaaaacaaaagtacatgaaattcaaaatgtctcatgag
gtgtaaacaacacaattatcattgtgaatatgtaattttatagcaatgaa
atctgtttgaaaacgaggacaacaataaatttatgcatctcgagaagagt
gtattgatgCGCCTATTGGATCCCATATGATGCGCATGCGTTATTTATCG
TCCTTTAATCCGTTAATAGTTAAACAGGGTAAAGTACATAGAGTAATAAA
TACGTAGGGGCGGTGTCCTATCTTAGGTCGAGGTTGCGATGGCTAAATAT
GTCgctttttattgttgttttttctcgTTATTTGTCGTTTCTATTCGTTT
TTAttcgtttttaatttttcttcgtTCTTATATGATCTCTATACTTTAAT
GGgcttaattttcgcgggtttaaATTTCGTGGTCGTGTGGACTTATAATA
CTGAACgaagacaatattttcacgattttgtgccttttactgccaaatca
tgcatgttggttgttgaaatactcGCTTCTTTTATTACAGTAAACATTAT
AAAAGTAgttgttttctatttttccaagGCCTTTCTAAACTTTCATTGGG
GCTTCACGTAAAATGAGGTCTGGGTTTTAATGAGTATTTTTAATGAGTAT
TGAACTTTTACCTTTTTCTCGTCGCAGGTGCTAACAATTTCCGCACCCAG
ATTGAATCGTTGGTTGGATTTCAAATCTCTTCATTTTGGATCATAATGTG
GAAATTTGTCACTCCTGTCATTGTTACCGTAAGACATAATTAATAAGTAT
TAATTTGTGATAAATTTTATTATACTGTTGGGTCTTTCTAATTGACCTTT
AAGGGACCAAGAAATTTCTTCGAActagagaaaaattcgaattacagaga
ctaTTTTGTACTACTttctagctgaggggaccaatattttagttcgaatt
agagagagagttgaATGTAGACGATTTTCCTGAAACAACTGAAAATTNTA
GggaaccaatattttagttcgaattagagagagagttgaATGTAGACGAT
TTGCCTTAAACAACTGAAAATTTCCTTGAGAAGTTCTCCTGATAACATCC
TTAAAAATAACATTTGACGGAGTATGAAGTGATATGGCAAGGCGTTTCAT
CTTTAAAAACCCCTTGAAAAACTCGTTTGATATcataaaataaatacaaa
atcttTTACCCTTTATCTTTATCAGACTTTAATCATTTTCTGCATCATTT
TTTCCAGGCCATCTTCTTGTCGAGTCTGATCACAAATAAACCTTTAACAT
ACGAGACTTATATGTATCCTGATTGGTCACAAGCTGTTGGATGGTTGATG
GCGATCGCTTCGATGATTTGTGTGCCCGTTGTTGCTCTTCTTTCGTGGCA
TAGTGCTGATGGAAATACAAGCCGAGAGGTATTCATAACTTCAACCCAAT
TTTAACAGCATAGAATAAAAATTACATCATCAGGCTATGTTGCCAGATGA
gaaagagtttttataagatactttaataattggtcagttgaagtaataaa
aatgacgaatttttaagaaaaagtaacaaaattattttattacttgttaa
cgaccaaccaaatcaaataagagcttgtaaaaactccatcgtGTCCctta
gtggggtcgtttagcataatttacgggaaaaaatAACTAActaaactcga
gatatttcatgcgtaagttccacttttcgccacactttggtctaaaattg
accatgaatagcatcttctgcgtgaattatcttgagttaggtaatgaaat
cggctatacccgtttaaaagtcttctatatagtttttcgagagctttcga
attgtggtatacttgataatgtctgaaaatgagtttgaaattttcaaaaa
atttcgcccttagggtattgcctggggaaaaaagaaatgtcccaaaaaag
ggatgttccaccagtgggattttagggaattttttcctgagccataacca
tcctatagagaaggtccagagaaatccagggagaaagatcGGAGCCCTCT
TCTACGTTCGGGTAGATGGCtattgaaagaggagcctttgaGTCACCTCT
GACTGCAGACGCAAGAAAACGCCACGCTTTAAAGTAAAGCACCTCACATA
ATggacagttgactctcgctaattcgaagtCGAATTGGAagacttgtttt
ttttgtttggattaCAGAAGATTCAAATTAAAGAAAGCATTTTACGttgg
tttctccttgacggggactgcgAATAAGTTCGAATTGTAGAACGaatcga
ataatagaaattcgaataagcgagagtctatTTTATACACACAGAAGTTG
TTATTTTTCATGTAACTATCCTTGCAAGTGAACACTCTTCGGTGTAATTC
CTTTGCGTGGAACCACCTATATCTCTTACAGAATACTTGCATCTTTTATT
TTACTGTCCGCATTCTCTTTTTTGATCGGTGAATCATCGTTTAACCTTTT
AAGAGTTCTAACGTCCCTCTCTAGGGTCCCTCAGGTCGGCTTagcaattt
tttttagtttcacgTTTTTTTGAGGTGGGACATcattagaatttagaaag
ttATTATGGTACACACGGTCATGAACTTTGATTCGATTTTGATGACAACA
CTTTAATAACAAGGGTCACCCCATTGTTCGAGTCTGATTTGCTTGACTTA
TACCATAAACTATTTCAGTGATGTGCTCGGCCTAAAGTCTTTCTtgacat
tgagtttaaagcccgaagggttatagtagaatctctaacctttctcaggc
aagaaaaagtgaagccacttatttcccatccagaacgcatCTAGAACGCG
CCGCAGTCATGACGaaggattgtatctagcgggtcttttgtttttgagga
ctgcattttttgaaatctagcgatagattttattttctatccggagtttg
tataaaaaccacgcgcgggcgttctggatgggaaataggtGGCCTCATTT
CCTATCCatgagtctcgagtctagctcTTCGGGTTTGGTTTTGTGGAAct
tgatttttatttaattcaaaaaatcgaaaactcTTAACCCAGATACATAT
ACTTCTTATTGACATTCTAGAAATTGATTGATTCCATGAGTGCAGTGGAT
TGTTTCAAAGTTGACAAAGATGCGGATGTGCCCTTGTATGCTGTCGAAAT
GTAAAGTTAAAAGAAGATAGAGCACTGTGAATTTTATATAAAACTAAAGG
GAGTTTCTTAATCACGGATTATCAAattctttgatcagagttttttgaaa
gtgttaCCCTGAATGGCACCAATAATTTATAGCGTTGTTAATGCATCGAC
ATCGCTATAAATCTACTTCTCGCTACAATCTTGTATGCTGTTTCGCTAAT
CAATGGCCTTTATGTGGTCACATTACTTCCTGCATTAtactttttaaaga
atttggttcaaagatggcggatatagctttgtTGAGCGTTTTAATAGAGG
TCAATGTCTACCGTCGTTTTGACGATTCCCTTTTCCGCTCTAAGATTCCG
CTACCACTTTTCTACCGCGGGAAAAAGAGGTTCGGGATTTGTAACTGTCT
CGTAACTAAACCATAGATTTAagaagcccgaagggctagatgtcgtgctt
taagtcATCGCAGGCAAAAGAAAGTgaatagcaaaaaaaatattgttact
tttgttttcgaaaactcgcgaagcttctgattggtcacgtgacttaggta
ggatttcctacctaacatCGGCACACTTTCCAGCTAAAGCTTcgcatcta
gcccttcgggctttataaatctatgaacTAAACACAAGGttttccgtacc
tttagaaaaAAACTCTTTCCGATCTCATACCGGCTATCCCTGGAAAAATA
ACGGAAAAATCCTGGAAAAGTCAGCAGAATATTAGAGCGAGAAAGGGAAT
CTTATGCAAAATGACGGTAATACCTAGCACTGCGTTTGCGTAATACTGAC
AAAGTATGACTTCCACTAGCACTACTGActacaaaaatgagtttgtaCGT
GTTGTTGTGTATTTCGTATTAGGCGATCAAATTTGACAAAACATTTAGTA
TTCTTCCCTCTTGGGGAGGTAATTGTGACCTTTGTTCGAAATTCTTTGCG
AGAATTCAGCTTTTTGAGGAACCGCAAATTGGTGTGGTGagactgaaatt
agattttgtgGATTTTTTGATCCGTGCCATTGTAGGGTTTTTGAAGATCT
AAGAAACCCTGACTCTATAAGAAAATGGTTTCAGATTTTAAGTGAAAAgt
gcgaaaaaattttggaGAAAGGGAAATTTGGAAAAGTCCTATAGGAAATT
AGGATTTAATATGCTTAGGTTTTATATGCTTATCTGATTAGTATTTTGAT
AGTTTAATAgggttttacttttttttcttgtATTCTTAAAAACTAAGGTA
TAGATATATTTTAATCGAAATTGatcttaaattttataaaattgttaata
tattttttaattcaaaattattgAGCTTGTTCCCATATGCTTTTATATAT
ATTCAGTGTAAATATGacctatatatttttttgaccTAAAGACAGATTTT
AAATAG

Coding sequence (CDS) from alignment at sc0000698:74747..92202+

>TCONS_00028701 ID=TCONS_00028701|Name=TCONS_00028701|organism=Clytia hemisphaerica|type=CDS|length=3708bp|location=Sequence derived from alignment at sc0000698:74747..92202+ (Clytia hemisphaerica)
ATGTTAATCACACTGGGTTTGGACAGTCAATTTGGTCAAGTAGAATTGAT
TTGTGCAGCCATCATTGAACAATATCCTGAGAAGTTAAAGAAACGAAAAG
AATGGGTTGTTCTTGCAGTTTGTGTGCTGTTGTTCTTATGTGGATTAATA
TGCATGACCAGAagtGGGATGTATTGGTTCAACTTGATCGATAATTTTTC
TGCTGGTATATCTCTTCTCTTCTTGGGTCTTTGCGAATTAATCACCGTTG
GATGGATATTTGGTGCTAACAATTTCCGCACCCAGATTGAATCGTTGGTT
GGATTTCAAATCTCTTCATTTTGGATCATAATGTGGAAATTTGTCACTCC
TGTCATTGTTACCGCCATCTTCTTGTCGAGTCTGATCACAAATAAACCTT
TAACATACGAGACTTATATGTATCCTGATTGGTCACAAGCTGTTGGATGG
TTGATGGCGATCGCTTCGATGATTTGTGTGCCCGTTGTTGCTCTTCTTTC
GTGGCATAGTGCTGATGGAAATACAAGCCGAGAGAAATTGATTGATTCCA
TGAGTGCAGTGGATTGTTTCAAAGTTGACAAAGATGCGGATGTGCCCTTG
TATGCTGTCGAAATGTAAATGTTAATCACACTGGGTTTGGACAGTCAATT
TGGTCAAGTAGAATTGATTTGTGCAGCCATCATTGAACAATATCCTGAGA
AGTTAAAGAAACGAAAAGAATGGGTTGTTCTTGCAGTTTGTGTGCTGTTG
TTCTTATGTGGATTAATATGCATGACCAGAagtGGGATGTATTGGTTCAA
CTTGATCGATAATTTTTCTGCTGGTATATCTCTTCTCTTCTTGGGTCTTT
GCGAATTAATCACCGTTGGATGGATATTTGGTGCTAACAATTTCCGCACC
CAGATTGAATCGTTGGTTGGATTTCAAATCTCTTCATTTTGGATCATAAT
GTGGAAATTTGTCACTCCTGTCATTGTTACCGCCATCTTCTTGTCGAGTC
TGATCACAAATAAACCTTTAACATACGAGACTTATATGTATCCTGATTGG
TCACAAGCTGTTGGATGGTTGATGGCGATCGCTTCGATGATTTGTGTGCC
CGTTGTTGCTCTTCTTTCGTGGCATAGTGCTGATGGAAATACAAGCCGAG
AGAAATTGATTGATTCCATGAGTGCAGTGGATTGTTTCAAAGTTGACAAA
GATGCGGATGTGCCCTTGTATGCTGTCGAAATGTAAATGTTAATCACACT
GGGTTTGGACAGTCAATTTGGTCAAGTAGAATTGATTTGTGCAGCCATCA
TTGAACAATATCCTGAGAAGTTAAAGAAACGAAAAGAATGGGTTGTTCTT
GCAGTTTGTGTGCTGTTGTTCTTATGTGGATTAATATGCATGACCAGAag
tGGGATGTATTGGTTCAACTTGATCGATAATTTTTCTGCTGGTATATCTC
TTCTCTTCTTGGGTCTTTGCGAATTAATCACCGTTGGATGGATATTTGGT
GCTAACAATTTCCGCACCCAGATTGAATCGTTGGTTGGATTTCAAATCTC
TTCATTTTGGATCATAATGTGGAAATTTGTCACTCCTGTCATTGTTACCG
CCATCTTCTTGTCGAGTCTGATCACAAATAAACCTTTAACATACGAGACT
TATATGTATCCTGATTGGTCACAAGCTGTTGGATGGTTGATGGCGATCGC
TTCGATGATTTGTGTGCCCGTTGTTGCTCTTCTTTCGTGGCATAGTGCTG
ATGGAAATACAAGCCGAGAGAAATTGATTGATTCCATGAGTGCAGTGGAT
TGTTTCAAAGTTGACAAAGATGCGGATGTGCCCTTGTATGCTGTCGAAAT
GTAAATGTTAATCACACTGGGTTTGGACAGTCAATTTGGTCAAGTAGAAT
TGATTTGTGCAGCCATCATTGAACAATATCCTGAGAAGTTAAAGAAACGA
AAAGAATGGGTTGTTCTTGCAGTTTGTGTGCTGTTGTTCTTATGTGGATT
AATATGCATGACCAGAagtGGGATGTATTGGTTCAACTTGATCGATAATT
TTTCTGCTGGTATATCTCTTCTCTTCTTGGGTCTTTGCGAATTAATCACC
GTTGGATGGATATTTGGTGCTAACAATTTCCGCACCCAGATTGAATCGTT
GGTTGGATTTCAAATCTCTTCATTTTGGATCATAATGTGGAAATTTGTCA
CTCCTGTCATTGTTACCGCCATCTTCTTGTCGAGTCTGATCACAAATAAA
CCTTTAACATACGAGACTTATATGTATCCTGATTGGTCACAAGCTGTTGG
ATGGTTGATGGCGATCGCTTCGATGATTTGTGTGCCCGTTGTTGCTCTTC
TTTCGTGGCATAGTGCTGATGGAAATACAAGCCGAGAGAAATTGATTGAT
TCCATGAGTGCAGTGGATTGTTTCAAAGTTGACAAAGATGCGGATGTGCC
CTTGTATGCTGTCGAAATGTAAATGTTAATCACACTGGGTTTGGACAGTC
AATTTGGTCAAGTAGAATTGATTTGTGCAGCCATCATTGAACAATATCCT
GAGAAGTTAAAGAAACGAAAAGAATGGGTTGTTCTTGCAGTTTGTGTGCT
GTTGTTCTTATGTGGATTAATATGCATGACCAGAagtGGGATGTATTGGT
TCAACTTGATCGATAATTTTTCTGCTGGTATATCTCTTCTCTTCTTGGGT
CTTTGCGAATTAATCACCGTTGGATGGATATTTGGTGCTAACAATTTCCG
CACCCAGATTGAATCGTTGGTTGGATTTCAAATCTCTTCATTTTGGATCA
TAATGTGGAAATTTGTCACTCCTGTCATTGTTACCGCCATCTTCTTGTCG
AGTCTGATCACAAATAAACCTTTAACATACGAGACTTATATGTATCCTGA
TTGGTCACAAGCTGTTGGATGGTTGATGGCGATCGCTTCGATGATTTGTG
TGCCCGTTGTTGCTCTTCTTTCGTGGCATAGTGCTGATGGAAATACAAGC
CGAGAGAAATTGATTGATTCCATGAGTGCAGTGGATTGTTTCAAAGTTGA
CAAAGATGCGGATGTGCCCTTGTATGCTGTCGAAATGTAAATGTTAATCA
CACTGGGTTTGGACAGTCAATTTGGTCAAGTAGAATTGATTTGTGCAGCC
ATCATTGAACAATATCCTGAGAAGTTAAAGAAACGAAAAGAATGGGTTGT
TCTTGCAGTTTGTGTGCTGTTGTTCTTATGTGGATTAATATGCATGACCA
GAagtGGGATGTATTGGTTCAACTTGATCGATAATTTTTCTGCTGGTATA
TCTCTTCTCTTCTTGGGTCTTTGCGAATTAATCACCGTTGGATGGATATT
TGGTGCTAACAATTTCCGCACCCAGATTGAATCGTTGGTTGGATTTCAAA
TCTCTTCATTTTGGATCATAATGTGGAAATTTGTCACTCCTGTCATTGTT
ACCGCCATCTTCTTGTCGAGTCTGATCACAAATAAACCTTTAACATACGA
GACTTATATGTATCCTGATTGGTCACAAGCTGTTGGATGGTTGATGGCGA
TCGCTTCGATGATTTGTGTGCCCGTTGTTGCTCTTCTTTCGTGGCATAGT
GCTGATGGAAATACAAGCCGAGAGAAATTGATTGATTCCATGAGTGCAGT
GGATTGTTTCAAAGTTGACAAAGATGCGGATGTGCCCTTGTATGCTGTCG
AAATGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016282XLOC_016282Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028701-proteinTCONS_00028701-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028701-exon-sc0000698-1491911889:74747..75072TCONS_00028701-exon-sc0000698-1491911889:74747..75072Clytia hemisphaericaexon
TCONS_00028701-exon-sc0000698-1510915933:74747..75072TCONS_00028701-exon-sc0000698-1510915933:74747..75072Clytia hemisphaericaexon
TCONS_00028701-exon-sc0000698-1575043694:74747..75072TCONS_00028701-exon-sc0000698-1575043694:74747..75072Clytia hemisphaericaexon
TCONS_00028701-exon-sc0000698-1491911889:76569..76681TCONS_00028701-exon-sc0000698-1491911889:76569..76681Clytia hemisphaericaexon
TCONS_00028701-exon-sc0000698-1510915933:76569..76681TCONS_00028701-exon-sc0000698-1510915933:76569..76681Clytia hemisphaericaexon
TCONS_00028701-exon-sc0000698-1575043694:76569..76681TCONS_00028701-exon-sc0000698-1575043694:76569..76681Clytia hemisphaericaexon
TCONS_00028701-exon-sc0000698-1491911889:86155..86286TCONS_00028701-exon-sc0000698-1491911889:86155..86286Clytia hemisphaericaexon
TCONS_00028701-exon-sc0000698-1510915933:86155..86286TCONS_00028701-exon-sc0000698-1510915933:86155..86286Clytia hemisphaericaexon
TCONS_00028701-exon-sc0000698-1575043694:86155..86286TCONS_00028701-exon-sc0000698-1575043694:86155..86286Clytia hemisphaericaexon
TCONS_00028701-exon-sc0000698-1491911889:87028..87127TCONS_00028701-exon-sc0000698-1491911889:87028..87127Clytia hemisphaericaexon
TCONS_00028701-exon-sc0000698-1510915933:87028..87127TCONS_00028701-exon-sc0000698-1510915933:87028..87127Clytia hemisphaericaexon
TCONS_00028701-exon-sc0000698-1575043694:87028..87127TCONS_00028701-exon-sc0000698-1575043694:87028..87127Clytia hemisphaericaexon
TCONS_00028701-exon-sc0000698-1491911889:88274..88374TCONS_00028701-exon-sc0000698-1491911889:88274..88374Clytia hemisphaericaexon
TCONS_00028701-exon-sc0000698-1510915933:88274..88374TCONS_00028701-exon-sc0000698-1510915933:88274..88374Clytia hemisphaericaexon
TCONS_00028701-exon-sc0000698-1575043694:88274..88374TCONS_00028701-exon-sc0000698-1575043694:88274..88374Clytia hemisphaericaexon
TCONS_00028701-exon-sc0000698-1491911889:88854..89024TCONS_00028701-exon-sc0000698-1491911889:88854..89024Clytia hemisphaericaexon
TCONS_00028701-exon-sc0000698-1510915933:88854..89024TCONS_00028701-exon-sc0000698-1510915933:88854..89024Clytia hemisphaericaexon
TCONS_00028701-exon-sc0000698-1575043694:88854..89024TCONS_00028701-exon-sc0000698-1575043694:88854..89024Clytia hemisphaericaexon
TCONS_00028701-exon-sc0000698-1491911889:90717..92202TCONS_00028701-exon-sc0000698-1491911889:90717..92202Clytia hemisphaericaexon
TCONS_00028701-exon-sc0000698-1510915933:90717..92202TCONS_00028701-exon-sc0000698-1510915933:90717..92202Clytia hemisphaericaexon
TCONS_00028701-exon-sc0000698-1575043694:90717..92202TCONS_00028701-exon-sc0000698-1575043694:90717..92202Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000698supercontigsc0000698:74747..92202 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.18259	0.888286	0.650577	0.396021	7.13346	6.09676	3.10245	3.77005	2.74818	3.32315	2.121	2.88786	6.11135	4.94491	2.97644	2.74621	6.53828	7.42702	3.80534	4.21311	17.9104	17.9974	7.67753	9.86315	30.3295	24.1642	2.016	0.86529	2.97992	1.49996
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000175Na/ntran_symport
Vocabulary: Molecular Function
TermDefinition
GO:0005328neurotransmitter:sodium symporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006836neurotransmitter transport
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006836 neurotransmitter transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005328 neurotransmitter:sodium symporter activity
Blast
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BLAST of TCONS_00028701 vs. Swiss-Prot (Human)
Match: SC6A3 (Sodium-dependent dopamine transporter OS=Homo sapiens GN=SLC6A3 PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 5.524e-53
Identity = 103/253 (40.71%), Postives = 162/253 (64.03%), Query Frame = 2 
Query:  191 HRDALLISIIDALTSIFSGVVVFTIIGYLAEVQGKEVDDPTIATDGPGLVFIVYPAALATLPQPQIWSVVFFLMLITLGLDSQFGQVELICAAIIEQYPEKLKKRKEWXXXXXXXXXXXXXXICMTRSGMYWFNLIDNFSAGISLLFLGLCELITVGWIFGANNFRTQIESLVGFQISSFWIIMWKFVTPVIVTAIFLSSLITNKPLTYETYMYPDWSQAVGWLMAIASMICVPVVALLSWHSADGNTSREKL 949
            +RDA++ + I++LTS  SG VVF+ +GY+A+     + D  +A DGPGL+FI+YP A+ATLP    W+VVFF+ML+TLG+DS  G +E +   +I+++ + L + +E   L + +  FL  L C+T  G+Y F L+D+F+AG S+LF  L E I V W +G   F   I+ + G + S +W + WK V+P  +  + + S++T +P  Y  Y++PDW+ A+GW++A +SM  VP+ A   + S  G + REKL
Sbjct:  343 YRDAIVTTSINSLTSFSSGFVVFSFLGYMAQKHSVPIGD--VAKDGPGLIFIIYPEAIATLPLSSAWAVVFFIMLLTLGIDSAMGGMESVITGLIDEF-QLLHRHRELFTLFIVLATFLLSLFCVTNGGIYVFTLLDHFAAGTSILFGVLIEAIGVAWFYGVGQFSDDIQQMTGQRPSLYWRLCWKLVSPCFLLFVVVVSIVTFRPPHYGAYIFPDWANALGWVIATSSMAMVPIYAAYKFCSLPG-SFREKL 591
The following BLAST results are available for this feature:
BLAST of TCONS_00028701 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SC6A35.524e-5340.71Sodium-dependent dopamine transporter OS=Homo sapi... [more]
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