TCONS_00028706 (transcript) - C. hemisphaerica

Overview
NameTCONS_00028706
Unique NameTCONS_00028706
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2590

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00028706 ID=TCONS_00028706|Name=TCONS_00028706|organism=Clytia hemisphaerica|type=transcript|length=2590bp
CCTCAAAGGGTTCTCAACATGcttcttgaagaaaaattcaaacatcGAGT
AAAAGTAATATGGAAGGCTGAACAATGGAAACTCGTGCGTAAAGCTCAAC
AAATCGACGCAAAGAGTGCAAGTTCTATGCTAGATGTTTTGAAACAGAAG
ATTGGTCACACACCGAGTTATGTTCATCTACTTTCGATCATGCAACATTT
ACTTCTTTTACCAGTCGATGCAAAGAAAGGTTTGAGCTATTGGCGAATCA
TAGACAGGATCATCCAAGAAATTGCATTACAACAACGGGACGGTACCGAT
CCCGATATGGCTCCTATTGATATCCACGTTAAACATATCATTGAAAAAAT
GACGACAGAGGACTTTAAAGATGACACGGTTTCAAAACTGGCCAAGCGTG
AAAGTGAAATGGCGGAGATGCGATCGACCGTCGAGAAAATGGCCGACAAA
CTCGATAAGGAGACGAGAGAGCACGAAGAAACGAAAAAACGATGTGACGA
ACTGATAAATAAAGCTAAGAAATTAGAACAACAGTTAAATGTTGAAATGG
TTTCTCGAATGAAATTAGAAGAAGTCGTGAAAGAAGTGGGCGCTTCCATT
CCCGATGATGCCAAGATCGCTAATCTAGCAAGCATGGGCGCACTTCCGCC
CTCTATGATTGCTGCAGCCGCTGCTTCTTCGCCTGCTTCCCCACCACCTC
CACCCAATATGGGCGCTTTACCGCCTCCGCCTGCGCCCCCGGGCTTCGGA
CCACCACCCCCGCCACAACCTCCTGGTATGGGTGGTTTCGCACCACCTCC
TCCGCCACCCGCCCCTGGGGGTCCGCCTCCACCACCAGGTATGGGTTTAC
CAGGcttcaacaacaaaaagaaatcgaaattaCCGAAACCATCACAACCA
TTGAAATCCTTTAACTGGACCAAAATTCCTGAGGTGAAGCTAAAAGGAAC
GATATTTTCAGATCTTGACGAAAATCAGATCATCCCACTATTGGACTTCA
AAAGGATCGATAAAGCTTTCTCTGCTTACCAAAAGAAAGAGAAAGATCCG
GAACAAGATCAAGAGGACGGTGGAAGTGTGTTGAATTTCAAACCGaaaga
actttcattcatcgaTAACCGACGTGCACAGAATTGTCAAATCATGTTGA
AAAACGTGAACCAACCAAACGAAGTGATCCGTGAAGCTGTTTGCACCATG
GACGTTGAAGACAGATTGACCAGGGATATGGTCGAACAGATGTTGAAGTT
TATCCCAACACCTGACGAAGCCAACTTATTCAACACGCACGCTAACGAAT
CACATCAATTCGCTGCTGGTGATAGTTATCTCTATGAGATGAGCAAgaTT
CCACACTTTGAGCAACGTTTAAAAGCTTTGTATTATCAGAAAGGCTTCAG
TGAGCGGGTCGGAGATATCAAACCTAAAATCGAATGCGTCATACGAGCAT
GTAAACAAGTATCTCGCAGTAAACGTTTGAAAACCTTATTCGAAGTCATC
TTATGTTTTGGCAATTACATGAATAAAGGGAGTCGAGCGAACGCTTCTGG
TTTCAAAGTCAGCAGTTTGAATAAAATTATTGACACGAAATCGAGTAGTG
ATAAGAGAGTTACTTTGCTACATTTCATCATTACTGTACTCGAAATGAAG
TTTCCAAGCGTTTTCCAATTAGAAGAAGAATTACCCGATATCAGGAGTGC
TGCCAAAGTCAatccaGCAGAGTTAACAAAAGAATTACAGCTGCTACGAG
CTGGTATCgtagaaattgaaaaagAATTACAATACCAAAGTACACTAAAA
AAGAAAGATAGATTACCTAATGATCGGTTCGTCGAGACTGTCGGAAGTTT
CGTCAAAGTCGCCAACTTTTCCATACAAGAAGTCGACGAAATTTACAAAG
AAATGGAAGATAGACTTGTAAagacattttcattgtttggTGAGGATCCA
AAATCGACTGCTGGTGAAGATTTTTTCGGTGTTTTCAACGGATTCCTCAA
TTCATTCGCTGAATCAAAAGGTGAGAATGTTCAAATGCAGAAACAGAAAG
AAGAAGAGGAGAGAAAAGCCAAAAGTCTTGCACAGCAAAGAGAGAAAGAG
CGTCAACGTAGCGCGGCAAAGAAGTTGATGTCGGATAATTTATCCGCCGA
AGATAAACGGAAATCTTTATCGGAAAGAAGTCCGGGTGAATTCGATGATT
TGATTTCTGCATTACGGACAGGTGATGTTTTCGGTGATGAAATGACAATG
TTTAGTAAACAGGGCCGGAAAAGGACTGGGAAACAGCGGAATGCTGTCAA
CGCCCCTAAAAAGATGTCGGTAATAGATCGAGACCGACGTGTGGACCAAA
CAGCTATAGCGGAAATGTTATGATAAGTCACGTGATTGGTAGACCGGAAG
GTGAACAGGTTTTTAACTTGGTAGAGGACCGGATTTTGTCCGGACAGTGA
AGTTAGCGGAAGTAGTAGTTCTATTCTTGAATATTGCTTCTGTCCTTTAT
AAAATAACGAATCGAAAGCTCCATTGTATATGAATACTGGATAGTGTGCG
CGATTTACCTCTTCGATCTGAAACCGAATTGGAGAGGTGC
Run BLAST on NCBI

transcript from alignment at sc0000698:117945..130387+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00028706 ID=TCONS_00028706|Name=TCONS_00028706|organism=Clytia hemisphaerica|type=transcript|length=12443bp|location=Sequence derived from alignment at sc0000698:117945..130387+ (Clytia hemisphaerica)
CCTCAAAGGGTTCTCAACATGcttcttgaagaaaaattcaaacatcGAGT
AAAAGTAATATGGAAGGCTGAACAATGGAAACTCGTGCGTAAAGCTGTGA
GTGTCAGCATAAGTTTTTTTCCTTGGCTACGTTAGTTTCCCGCGAAATCT
TTTATAGTTCGTTTAAGTTAAttatttttggatattctttTTTAGCAACA
AATCGACGCAAAGAGTGCAAGTTCTATGCTAGATGTTTTGAAACAGAAGA
TTGGTCACACACCGAGTTATGTTCATCTACTTTCGATCATGCAACATTTA
CTTCTTTTACCAGGTGAGGAAAAATCGTTCATTTAAACTTTTGTTTAAAT
ATCCGCTGTTTTAAAATTCCTAAACGACCGCAGCATGAACGTAGATCATT
CAGCTACGGTGCTCAAGGTTGTTGGTTCGATCCCTGGTCGGGTCACTCCG
AACGCTCTCAAAAAGGTTCCTTATGCCTctttgcttgatgctcagcaact
taaaaaatggtaaaaactaaaaacttcgTTCCCAAATTTACTTACTTTAA
ATATCCTCCCAGTTTTCTCTCATAATGGAATGTAGTTTTTACCAAGAGAA
TTGTGTCGCGAATGAGATTTAATTTCGGTCTATGGACTTATGACTCCTGT
TAGAGTCGTTTAATTTGAATCATTTTCTTGTAGGTGCCCCATGGTTTGAA
CGACCTCTAAATATCATATTCCCTTGCTTTTTTAGTCGATGCAAAGAAAG
GTTTGAGCTATTGGCGAATCATAGACAGGATCATCCAAGAAATTGCATTA
CAACAACGGGACGGTACCGATCCCGATATGGCTCCTATTGATATCCACGT
TAAACATATCATTGAAAAGTAAGTACTGGTTCATTGTATACAGTTGATgc
gggacgagatggagtttttacaagctcttatttgatttggttggtcgttt
accagtaataaaacaattttgttactttttctaaagaacgcttCATTTTT
ATTACTTCAAATGACCAATTATTTAACTATCTTATAAAAACTCCATCTCA
TCTGGTTGATGCCTCCTTATTCGATTTTCAAGGGGAATTGGATTATCATC
GGATTAGGGAGCGTATCGAATGGTAGGACGTCGTTTGTGAGATTTTCTTG
TTGATGTTGGCTTTCAACTTTATCGAACAAATGGAGCGTTTCGAATAGTA
GAACGTCGAATTAGAGAACGTCGACCTGCATTTTGTCAACTCGGACCCTT
ATATGTTGAAATGGAACTCCTTATAACTgggttaaattaaaaaaaaaaag
attactgGACCTGTGTTACTTTGTTGCGCTTACTACATCTTCGTATTTTT
CAACCTTCCACTTTGGAAATCAAGGTGTAGTTCGACATTTCTTTCAACGT
AACCCTCTTCGTCTTACTATGCAATAACAGAGCACAATATTCCAATATTC
CAACACGCAAGACTTAGTAATAGTGAAAAATTCTTGTCGTTTTTCTAGAA
TGACGACAGAGGACTTTAAAGATGACACGGTTTCAAAACTGGCCAAGCGT
GAAAGTGAAATGGCGGAGATGCGATCGACCGTCGAGAAAATGGCCGACAA
ACTCGATAAGGAGACGAGAGAGCACGAAGAAACGAAAAAACGATGTGACG
AACTGATAAATAAAGCTAAGAAATTAGAACAACAGTTAAATGTTGAAATG
GTTTCTCGAATGAAATTAGAAGAAGTCGTGAAAGAAGTGGGCGCTTCCAT
TCCCGATGATGCCAAGATCGCTAATCTAGCAAGCATGGGCGCACTTCCGC
CCTCTATGATTGCTGCAGCCGCTGCTTCTTCGCCTGCTTCCCCACCACCT
CCACCCAATATGGGCGCTTTACCGCCTCCGCCTGCGCCCCCGGGCTTCGG
ACCACCACCCCCGCCACAACCTCCTGGTATGGGTGGTTTCGCACCACCTC
CTCCGCCACCCGCCCCTGGGGGTCCGCCTCCACCACCAGGTATGTATTgg
aattaaaacaaaatattatctttcaaaggtttttcaaaatttcgctCCGA
TAATCTCTAAACTTTCGAGAAACTAAAGCTAAGATACACTGACGCGTTGA
AAGCGCGTTATAAATCACACGGTGTAGTAAAATGTGTTCAATTTCTACAA
TGGCAATAAGAAGATTGCAGAGCGTTTTCGatagatttcattttttcttt
gcaaaagaaAGGTACGAACGTTTTGTttaacacgttttttttcaaTGCTT
GACTGCAACGATTCGCAATATTGCATCATCGCGACTCCTTCTACTTTTAG
GTATGGGTTTACCAGGcttcaacaacaaaaagaaatcgaaattaCCGAAA
CCATCACAACCATTGAAATCCTTTAACTGGACCAAAATTCCTGATGTAAG
TATCCTTGTTCCTGATCTAATAATCTATTATGCAGGTGGTGCACGCTCTA
TTATTTGCCCCAATGTGGGGGGGGGCAGTCcagcaaattgaccgacggtt
ATTTAAGGGTACTTGAGGCGTACAAACTTtggcgagcagaaactttcggg
attttcgcgaattttggccttttttgcgaaagtaaatgtctttgaaaatt
ctaaacgGGACAATTCGcgaaaaaattctcaaaaaagttgaaaatctata
aaacctcgaaATTGTAATAAATATCAAACTGTCGGCATGTTATTATCCTT
TAATGCAAttttaaagtcgaagagcaaccgTCTTTAGCGAATTTAAGGAA
TATctttcacttttaaggcaattttttttcgaaaattctcatttttatcc
tacgattcgcgaaagtttatgctcgcgaaaaacattttttccttaAATTC
GCGAAAGCAAATGTCGTGAATGTGGACTTTCGAtgaatgcactgtaaggg
tggaagtTTCAGCAAATCTATTTTTTTGCTCtatgaaaagttgaaaattt
gataaaaatgcactgtaagggtataaattttaccttttttgctgcactgt
aaggatgcAATTctaaaagtcatttttttcGCTGTGCATActgtcagttg
gtaaacccactgcccccctcCGGATTTAGGGGGTTTTTCGTTTacccaat
acacgtttttttttttttataaggaaccttaactttgctctgagcctgga
attccttatttttacagagaatttaagcctcaaagttccttatcgagttc
cttatttacatagctgctaattTTGGATAACCAtatctcttactgttcct
taaaacttgttttcttattctcagcctgagcagttcctaaaccATTCcta
attttttggaccattttcagcctcgagttccttataaacgtgttccttat
ataaaaaaaaacgtggaACGCAAACTTagttattttttactttttccacA
CACAGGTGAAGCTAAAAGGAACGATATTTTCAGATCTTGACGAAAATCAG
GTAAGTAGATTATTGTGGTTTaaacccccggggggggtactacccttgtc
gaccaacgggggtgctccgctgaNTTAAACCTAATAATCTAAAATTTAAA
CATAATATTACTATTATATtataggctgcacgcatcccctctgatatgtt
ttgatataggggctGGGTATCTTGTAtaaaattctcgtccgagagttaat
caaaatttgaatctcTAGAGGTTAATAAAATCATTGGATTTCTGaagctt
tttaagaaaattgaaatagaTTACCCTGAAattggggtaactctcggaca
gAAATTTTATGTACGATACGCTGtatcaaaatcaattctggGGATGTGCA
CAGTCTATCTTTTACCATGATGTGGtttcaaaaagctttcaaaaatcaaa
gaattttaATCTATGCGTGTTGTTTTTTACAGATCATCCCACTATTGGAC
TTCAAAAGGATCGATAAAGCTTTCTCTGCTTACCAAAAGAAAGAGGTTCG
TAATACCACTTGAAACAAACGACATCTTCTTCGATATTTTGATTAATTAA
TTCTAAGCTTTcatttgttcattcttttacagAGAGATTGAATACTTCTG
GAGGAATTTTTAAACTGCTAATGTatagttttatataattttatagtttt
taaaaatagattGCTAGTTTTGTGGTCTAGGGCGTAGGGCGAACCTTATT
TTTATCATAGTAGTTTGGAGAACAATATTgagtttttaagttttaatttg
atttaatttttaagtAGTTTATAATTTCTAACACCAGGCATCTGCTTAGA
TAAGAATCAAGCTGCTAAACGAGTTCTTTCGAAAtcctaggggggggggt
agttGGGCAAAAATGGGAGTCTAAGAAGAGTGAAAAGTCATCAAGAAAGT
AAAGATTTTTcgaaagtattgaaaaattttcattgaaaatcgaAGACATT
TTGGTGAAAATGTTTCTCCAAGGgtcttttttaaacaatttttttctctc
taaaTGGATCGCTTTTTCAGCACAAATCAGTCTCTCTATAAAGGGTAGGG
GCTTTAAGGTCTGGTACGCACATATCCAGCATTCCTCAACCctaataccc
ccccccccccccctcccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNCCCCCCCCCCCGCCCGTTCGAAATATTGTACTTGGTT
TGTACTTGGTTTGGAATAATTGTAAGACAGGTTATGAGGATGTTTATATA
ACTTTACTCTTATTGTTCTTCTCTTTTAGGAGTATGAACAGCGAGACTTG
GTAAGGTTGCTTATTCAGCACTGTTAGAAGATTTGCTTGCTCCGACAGAT
TCAGATTATTCAATTTGTTTGAGTCGTTGACAAGATAGTGAAAATTTGTA
TTATAGTTCTTGTTGCTTGTTTAGGAGGTTGTTTACTACACAGTTATTAA
TGGATTCTTTACTAtgaaatatctttctttttctaGACTAAAACCAAGAA
ATCTGAAAAATCAGTACGTAATAATCATATTATAATTCCGTAAAGCTtat
aatgtataattttaaaaccGACGTAACTATGTACTGTAAGGTATTATAAA
ATTAAACTTAAACATCATGAATTCTAAATCCTTGATTGAAAAATAACTGC
TCTTGTATAATATCATCACCATTATGAGtaatttttaaataactttaacT
GGGTAATAAATATGCTTGTCAATACATGAACATCTTAATCGTATAAATAA
ATCTACATTATAAAGATTCTTTCTATCATTCACTGGAAACTGGTCATAAT
TTCTCTCGTTAATTTTCCGTTACTGTAGAAAGATCCGGAACAAGATCAAG
AGGACGGTGGAAGTGTGTTGAATTTCAAACCGaaagaactttcattcatc
gaTAACCGACGTGCACAGGTTTGTTTGATTAATTGTATTACCTTAccctt
aaaagaagaaatttttgcggaatttaattttgctgtTCACAACTCAAAAT
TCGNGAGAAGAAATATTCGtggaaagaaattttcgcggagtTTAATTTTT
CGGTTCACAGCTTAAAATTTGGAAGTTttacggaatttaatttcgcggtt
cagaggaatttttgtttaaaatatagcctattttgccctaaaaagaccaa
ttttataggtgattttttaaatcatgagaTTATTCGTGTTTCGCGGAAAT
TTGTATACAGTANaaaaagaccaattttataggtgattttttaaatcatg
agaTTACTCGTGTTTCGGGGAAATTTGTATACagtaattaatttcaaaat
tcaaaacttccGTATTATTGACGGGTGTTCCCATTTCCATGTTTCGtctt
tgctgaaattttgaagaatccGCTGAAGTTTTTTTGTATGTATACTTTGC
ATGTAAAAACGATTTAAAGTTCTACCGACGATTTTCTTTGTGTTctttaa
gaaaaatctttttttgctgtgattatattttatttagcttcCAATCAGAA
TTACTTATCTGCTAGATACCTTAAGGAAACtatttttaaagtaatttttg
CGGTCAAGAAAAGATTTGCATTTCGCGGGAAtcaattttcgcgtttttgc
ccctttctgacaaatttctttcattatcCTAGGGATTTATCAGATTTTCT
aataaaattagcaaaaattatatttcgttgactcaaatttttgcaaagca
aaaattaattcctgtaaGGTAGCACCGCTCCTTTCGAAATGAAACCAACA
TTTAAAACCTGATCTCAATACTGTCCAAACATACTAGTAGGTATAGTTTT
TAAAAGGAATAAATTCACTTTAAATAGCCACTAAACATTTCCCTTTTCTC
TTATGATTTGAAGAATTGTCAAATCATGTTGAAAAACGTGAACCAACCAA
ACGAAGTGATCCGTGAAGCTGTTTGCACCATGGACGTTGAAGACAGATTG
ACCAGGGATATGGTCGAACAGGTCTGTCTTTCCTTCCTTTTCCCTCAATA
TCTCAACATTATATCTACCTGCGACGATTCCTTTaaactttgatgaaaat
ttcttaGTTTTCTTTCAAACCTTTAAAAGGATACTGGTTtcttttgctca
agtttttccCATTGTTTTCTGTTTATCCTTGCCaggaatttttgaaatat
taatcTTAAGAGAACATCTCTAGATTACTATAATCAAATTTTTCCTTCTT
CCTTCAGATGTTGAAGTTTATCCCAACACCTGACGAAGCCAACTTATTCA
ACACGCACGCTAACGAATCACATCAATTCGCTGCTGGTGATAGTTATCTC
TATGAGATGAGCAAGTGAGtctgctttttttttatttgacaacATTTATT
GGTAGCTCTGCTTTAAACGTTAAGATAAACTTTATTAAATTAAAAATGAG
TTGGAGGGCAAAAAACAAAACTCATTTAGTCTCTAGGTTTAATTTTGGGT
TTCAAATATGGTAGATTTATTTTTTAGTAAAAGAATACGATCTTtatttc
aggcaaaaaaatatatatgtgAAATCTGTTGATATGGGCAAATTGGGGCG
GAAATTCTTAACAAATTCTGATTTTAACCATGGAGTTTATCAGCAAAGAA
tgttcttttcatttctttaggaTTCCACACTTTGAGCAACGTTTAAAAGC
TTTGTATTATCAGAAAGGCTTCAGTGAGCGGGTCGGAGATATCAAACCTA
AAATCGAATGTAAGTATAGTCGGCGCTCTCTAATACGACGATCTATTACT
TTAATGTGTTTAATtttcgcagggattaaatttcgcggatttcgtgCATT
TGGGTGTCATCCTCGAAATTAAGTCcgaatggaaatttggaaaggcctta
tccgcgaaatatttctgaacaaaacttttaaaatgtcaaataactACTTT
TTAAATGGTTATTGGTACCAAAGAAACGCTAATAAtacgtatttcaacaa
ccaaaatgcattatttgacattaaaaggtacaaaatcgtgaaaatattgt
caccCAATAGTAACATCCGCAAAATTAAGCCCTCCCCTGAAATCTTAACT
Aacatttcgcggatgagctcaaccgcgaaattttatccccgcgaaaatta
attccattaaagtattcgatgaaaaatcttttctcCTTCAAAATCGGATT
AGAGAATCATCAAATATATGCCTATATAAATCGATCATTTGCGATTTTAG
CACTTATaggcttatgcaaataaatggatAGAAATAGAGATCAAATAAGT
CCCATCAGGCACCAAGCCTTCAAtgctatattttgtttttttcttccagG
CGTCATACGAGCATGTAAACAAGTATCTCGCAGTAAACGTTTGAAAACCT
TATTCGAAGTCATCTTATGTTTTGGCAATTACATGAATAAAGGGAGTCGA
GCGAACGCTTCTGGTTTCAAAGTCAGCAGTTTGAATAAAATTATTGACAC
GAAATCGAGTAGTGATAAGAGAGTTACTTTGCTACATTTCATCATTACTG
TACTCGAAATGAAGGTGATTACCATAATGTTCCATATCCAATTACCAATT
ACCATAATGACTACCAGAAATTATAATTACCATCAGTTTTTCAaatcctt
ttttcaaaaaatatcaatttccaGTCCGACAAAACTTGCGTATTTGCTTT
GTTCAATCTGACTGAAGCCAATAAATACTTCCAATACTTCCTACTGTAAT
TCGAGCAGGTTGAATTTCACATTCAAGCTCGAAGAAACTCTGCAGTAAAC
AACCGTATAGCTCTTAAGGCCTATCTAGGCACAGCTCGAGTAACAAACCC
TTCCACTAATATTCTAAAGAAATCTATATCAAACCTCCGTTCTTCatgtt
tgtttttcaatttcttctttagTTTCCAAGCGTTTTCCAATTAGAAGAAG
AATTACCCGATATCAGGAGTGCTGCCAAAGTCAagtaagtcaaaaaaaaa
aaaattatgctctaattgatttttataaaataggcTCTCAGCCTcacttg
tttgttgtttttttgacataattcatcattaaggccggtctccacttgcg
tgcGCTGGGATAGCACCTTTTGgcaaaagattacgtcataaaaatgtagt
gcgcgctcgaaaaaaagttgaatacatttcaacttttttcaaccgttacg
tcagatcgcgccaatgaaacggtttcaatttttctttgaccaatagcgtg
gaagctctgatcgaaaaagtgcgatcgcagcgcgcgcaagtggagaccgg
cctttagtcTTTCTCGGAAGCCTCCTCTCTAACAGCTCTAATAGCTCTAT
ATAGTTAGCCCAGTCATCAGTTTTTATCAGATGATCTTGAGAGCCGCTTC
TTGCAGGAAGCCAATATTTGACATgcgttctttaatttttttttcagtcc
aGCAGAGTTAACAAAAGAATTACAGCTGCTACGAGCTGGTATCgtagaaa
ttgaaaaagtaagaaatttCTACCTTTTGGtgcctcaaaaaattaaaatt
tgtttgaaatgaGGAGGGAGAGGCCTACATACTATATGGATTACCCCATT
TAGTGCCCAcgccatgaaattgaaattatatgAATATAGAGTCTAAAGGA
GGCgcaacaaaaatttttactttgcaaAAGTAAGCACCCCCGCAGTGGCT
TGGGTCCTGCAATTTTGTTTAGTATATCTGAATATCCCTGGTTACTGTAG
AATTCCTAACAAACATTgtcctttttttgtttcataggAATTACAATACC
AAAGTACACTAAAAAAGAAAGATAGATTACCTAATGATCGGTTCGTCGAG
ACTGTCGGAAGTTTCGTCAAAGTCGCCAACTTTTCCATACAAGAAGTCGA
CGAAATTTACAAAGAAATGGAAGATAGAGTAAGGATTGTACTCAAAGCTA
TCTCGGTATTGTGATACCATAGTCAATATAAAAAATCCCGGTCTGGAaag
cttttgtttctttcttttgttaacAGTTAAAGCATGCGTTCGCAAATCGA
cttgttttgcatattttttgaTCGTGTGATTTGAAATTAACCAATCCCAA
GGGGagaacgtgatcaaaaagtatgcaaatcgcaacttgtcttttattta
taacaaaggaaaatttgacaaaaaaagctaaaacaatacattgctagacc
agagttttttataatgactatggtggTGATACACTCTTTtcgagatacat
aaaattgttgCTGATCAAGAAAgttcaaatgtttgaagaacaatgtttga
cggtttgctcccagctttacatgtctttttataagaacatccgaaaatTC
ATAAAAGTCTTTgggtgttcttaattttttgagtttttaaagtctaaaat
gttctttaaaattttgttatttttcaccgttttgtgagtatttttgtgcc
aTTGCCTAAAAGTTTAGTGTTATTGAGTTCGTGAAGCCTAGAAATGTTTT
GAACTTTATTTTGGCAATTGAAAcctcatgtttttattttgttcctATGA
AACGAAAAGATGTCCTTTCAAAACATAGTTGCCGAAATACTTCTTACATG
AAGCTTTGGAATTTTAAATGGAATTCACTCTCAGTATCCTTTGTTTGTAC
ATATTATACCATCAAAAGGttgatgaatattttttgagttcattattatt
atttacaattttttattttttttgacagCTTGTAAagacattttcattgt
ttggTGAGGATCCAAAATCGACTGCTGGTGAAGATTTTTTCGGTGTTTTC
AACGGATTCCTCAATTCATTCGCTGTAAGCTTTTGAAATGACAAttatca
aatattttaaaaagtcaGCATATGTCATCTCTAGTTCATGTGCTTACTCT
AGCACCGTGCAAAAAAACCCTGCTAATTATTCGCTAGTTACCATTTCTGC
ATAATATCAAGAACTTGGGCTCTTcctagactgggaatccagtcgtttat
aacgtttttgttgaaagcggaaaatttttatgtcgggatatggttaaaat
aaacgactgggctaaggtggtttccgtagcttacgggagttccagcaggg
cccgcagatttctgcggggtgagaaaacaatcatatacaacaaaatatat
aaacaaataaaaatttcagccaatgagaatttctaagtgaaagaaaaaaa
aaaaaaaaacaaatcaaaccaacaagaccccctgaaaatgttatccaaaa
acatgaaaaaagagaatttttatgaaaagtttgttgtgtacaaaatattc
tagacgactatattgatgcttctgtcaagttttctacttcctatttttta
ccgagttaagtcgtctagcatgctagactaggctcttccagaaaatgttc
gtgtATGGAGGGTGGAGGGTACATAGGGgctagtgaaaaatctacaaaat
ttaccttgtccgggggtaattttgaATCAACTGGTAATTTTGGTCAACTG
ATGCCTGTTCGGGGGTCAAAAGTTACAATGTTCGGGGGGgagggtaaatt
tccaaaaaattctcCACCCCTTGTCtgtttttagttattttttaattaat
tttcgtTTTCGTCACAGGAATCAAAAGGTGAGAATGTTCAAATGCAGAAA
CAGAAAGAAGAAGAGGAGAGAAAAGCCAAAAGTCTTGCACAGGtaaacaa
aattgtaaaaataatttgctGGTAATCCCTTTTCACATACATTCaaagta
ttttagattttgaaggTAGATTTTAAATGAccatcaatagacctttttat
aaatGATGTCACGAGCAACGCTTGTCTCCTCTTCAAcatattagcgaggt
taagcaattGTTTATTTAGACTGTTCAATGTGATATTGTAGGTCTATACA
TGagatttcacttgcatggtttgctttggcaagttatggCCTACGGTATT
GCATTGAACGGTCAATATAAACctgtgcttaacctcgctattactATGGT
AATTGACTCCTGTTAGAGGTGTTTATAAGAAGTTTACTCTGTTATAAAAG
TAACACCTGAAGACTctaggaatttgaaataaccttggtaatgttttcaa
aacgaggcagtggTTTCActcaaataaaattataaaaggCATAATTATTC
AACGAGGAGAAGCAGTTTCCTGTCTCCCGAAAACACTATAAAATAAGCCA
CTAAAATctcttttaaaggttttgtttttacataagtctttccgtttcat
atcagacacatatttgaTATCAGGACAGAGTCtagctattgttatattat
gttgATATaagcaagaaaatgtttttcttttcctctttctgaccaatctt
gctccacatacgtgTCAGTCCAAtgatgaaaaagcttgtgaattaaaagt
gACGAGTAAAGCAAacgttatcactcttatttaaaaacaaaacctttaaa
tcaaaagtcactcaaatttttttttcttataactttaGCAAAGAGAGAAA
GAGCGTCAACGTAGCGCGGCAAAGAAGTTGATGTCGGATAATTTATCCGC
CGAAGATAAACGGAAATCTTTATCGGAAAGAAGTCCGGGTGAATTCGATG
ATTTGATTTCTGCATTACGGACAGGTGATGTTTTCGGTGATGAAATGACA
ATGTTTAGTAAACAGGGCCGGAAAAGGACTGGGAAACAGCGGAATGCTGT
CAACGCCCCTAAAAAGATGTCGGTAATAGATCGAGACCGACGTGTGGACC
AAACAGCTATAGCGGAAATGTTATGATAAGTCACGTGATTGGTAGACCGG
AAGGTGAACAGGTTTTTAACTTGGTAGAGGACCGGATTTTGTCCGGACAG
TGAAGTTAGCGGAAGTAGTAGTTCTATTCTTGAATATTGCTTCTGTCCTT
TATAAAATAACGAATCGAAAGCTCCATTGTATATGAATACTGGATAGTGT
GCGCGATTTACCTCTTCGATCTGAAACCGAATTGGAGAGGTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016283XLOC_016283Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028706-exon-sc0000698-1491911889:117945..118040TCONS_00028706-exon-sc0000698-1491911889:117945..118040Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1510915933:117945..118040TCONS_00028706-exon-sc0000698-1510915933:117945..118040Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1575043694:117945..118040TCONS_00028706-exon-sc0000698-1575043694:117945..118040Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1491911889:118140..118257TCONS_00028706-exon-sc0000698-1491911889:118140..118257Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1510915933:118140..118257TCONS_00028706-exon-sc0000698-1510915933:118140..118257Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1575043694:118140..118257TCONS_00028706-exon-sc0000698-1575043694:118140..118257Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1491911889:118680..118812TCONS_00028706-exon-sc0000698-1491911889:118680..118812Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1510915933:118680..118812TCONS_00028706-exon-sc0000698-1510915933:118680..118812Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1575043694:118680..118812TCONS_00028706-exon-sc0000698-1575043694:118680..118812Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1491911889:119443..119933TCONS_00028706-exon-sc0000698-1491911889:119443..119933Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1510915933:119443..119933TCONS_00028706-exon-sc0000698-1510915933:119443..119933Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1575043694:119443..119933TCONS_00028706-exon-sc0000698-1575043694:119443..119933Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1491911889:120245..120337TCONS_00028706-exon-sc0000698-1491911889:120245..120337Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1510915933:120245..120337TCONS_00028706-exon-sc0000698-1510915933:120245..120337Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1575043694:120245..120337TCONS_00028706-exon-sc0000698-1575043694:120245..120337Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1491911889:121348..121394TCONS_00028706-exon-sc0000698-1491911889:121348..121394Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1510915933:121348..121394TCONS_00028706-exon-sc0000698-1510915933:121348..121394Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1575043694:121348..121394TCONS_00028706-exon-sc0000698-1575043694:121348..121394Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1491911889:121827..121889TCONS_00028706-exon-sc0000698-1491911889:121827..121889Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1510915933:121827..121889TCONS_00028706-exon-sc0000698-1510915933:121827..121889Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1575043694:121827..121889TCONS_00028706-exon-sc0000698-1575043694:121827..121889Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1491911889:123273..123362TCONS_00028706-exon-sc0000698-1491911889:123273..123362Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1510915933:123273..123362TCONS_00028706-exon-sc0000698-1510915933:123273..123362Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1575043694:123273..123362TCONS_00028706-exon-sc0000698-1575043694:123273..123362Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1491911889:124308..124415TCONS_00028706-exon-sc0000698-1491911889:124308..124415Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1510915933:124308..124415TCONS_00028706-exon-sc0000698-1510915933:124308..124415Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1575043694:124308..124415TCONS_00028706-exon-sc0000698-1575043694:124308..124415Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1491911889:124652..124758TCONS_00028706-exon-sc0000698-1491911889:124652..124758Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1510915933:124652..124758TCONS_00028706-exon-sc0000698-1510915933:124652..124758Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1575043694:124652..124758TCONS_00028706-exon-sc0000698-1575043694:124652..124758Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1491911889:125065..125153TCONS_00028706-exon-sc0000698-1491911889:125065..125153Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1510915933:125065..125153TCONS_00028706-exon-sc0000698-1510915933:125065..125153Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1575043694:125065..125153TCONS_00028706-exon-sc0000698-1575043694:125065..125153Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1491911889:125744..125958TCONS_00028706-exon-sc0000698-1491911889:125744..125958Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1510915933:125744..125958TCONS_00028706-exon-sc0000698-1510915933:125744..125958Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1575043694:125744..125958TCONS_00028706-exon-sc0000698-1575043694:125744..125958Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1491911889:126317..126378TCONS_00028706-exon-sc0000698-1491911889:126317..126378Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1510915933:126317..126378TCONS_00028706-exon-sc0000698-1510915933:126317..126378Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1575043694:126317..126378TCONS_00028706-exon-sc0000698-1575043694:126317..126378Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1491911889:126842..126902TCONS_00028706-exon-sc0000698-1491911889:126842..126902Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1510915933:126842..126902TCONS_00028706-exon-sc0000698-1510915933:126842..126902Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1575043694:126842..126902TCONS_00028706-exon-sc0000698-1575043694:126842..126902Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1491911889:127182..127322TCONS_00028706-exon-sc0000698-1491911889:127182..127322Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1510915933:127182..127322TCONS_00028706-exon-sc0000698-1510915933:127182..127322Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1575043694:127182..127322TCONS_00028706-exon-sc0000698-1575043694:127182..127322Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1491911889:128123..128218TCONS_00028706-exon-sc0000698-1491911889:128123..128218Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1510915933:128123..128218TCONS_00028706-exon-sc0000698-1510915933:128123..128218Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1575043694:128123..128218TCONS_00028706-exon-sc0000698-1575043694:128123..128218Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1491911889:129012..129086TCONS_00028706-exon-sc0000698-1491911889:129012..129086Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1510915933:129012..129086TCONS_00028706-exon-sc0000698-1510915933:129012..129086Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1575043694:129012..129086TCONS_00028706-exon-sc0000698-1575043694:129012..129086Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1491911889:129883..130387TCONS_00028706-exon-sc0000698-1491911889:129883..130387Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1510915933:129883..130387TCONS_00028706-exon-sc0000698-1510915933:129883..130387Clytia hemisphaericaexon
TCONS_00028706-exon-sc0000698-1575043694:129883..130387TCONS_00028706-exon-sc0000698-1575043694:129883..130387Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000698supercontigsc0000698:117945..130387 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.274109	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9.28871e-09	0	0	0	0
Blast
[Close]
BLAST of TCONS_00028706 vs. Swiss-Prot (Human)
Match: DAAM1 (Disheveled-associated activator of morphogenesis 1 OS=Homo sapiens GN=DAAM1 PE=1 SV=2)

HSP 1 Score: 384.415 bits (986), Expect = 9.265e-117
Identity = 203/470 (43.19%), Postives = 300/470 (63.83%), Query Frame = 1 
Query:  910 FNWTKIPEVKLKGTIFSDLDENQIIPLLDFKRIDKAFSAYQKKE--------KDPEQDQEDGGSVLNFKPKELSFIDNRRAQNCQIMLKNVNQPNEVIREAVCTMDVEDRLTRDMVEQMLKFIPTPDEANLFNTHANESHQFAAGDSYLYEMSKIPHFEQRLKALYYQKGFSERVGDIKPKIECVIRACKQVSRSKRLKTLFEVILCFGNYMNKGSRANASGFKVSSLNKIIDTKSSSDKRVTLLHFIITVLEMKFPSVFQLEEELPDIRSAAKVNPAELTKELQLLRAGIVEIEKELQYQSTLKKKDRLPNDRFVETVGSFVKVANFSIQEVDEIYKEMEDRLVKTFSLFGEDPKSTAGEDFFGVFNGFLNSFAESKGEN---VXXXXXXXXXXXXXXSLAQQREKERQRSAAKKLMSDNLSAEDKRKSLSERSPGEFDDLISALRTGDVFGDEMTMFSKQGRKRTGKQ 2286
            FNW+K+PE KL+GT+++++D+ ++  +LD + +++ FSAYQ+++        K  E D  D       K KELS ID RRAQNC I+L  +   N+ I+ A+ TMD ++ L +DM+EQ+LKF+P   + +L   H +E  + A  D +L+EMS+I H++QRL++LY++K F+ERV ++KPK+E +    ++V RS  LK L EV+L FGNYMNKG R NA GFK+SSLNKI DTKSS DK +TLLH++IT++E K+PSV  L EEL DI  AAKVN  EL KE+  LR+G+  +E EL+YQ   K +   P D+FV  V  F+ VA+FS  +V+++  E +D   K    FGE+      ++FFG+F+ FL + +E+K EN    + ++++E   R    L +QRE+ER+   AK+               +    GEFDDL+SALR+G+VF  +++   K+ RKR   Q
Sbjct:  613 FNWSKLPENKLEGTVWTEIDDTKVFKILDLEDLERTFSAYQRQQDFFVNSNSKQKEADAIDDTLSSKLKVKELSVIDGRRAQNCNILLSRLKLSNDEIKRAILTMDEQEDLPKDMLEQLLKFVPEKSDIDLLEEHKHELDRMAKADRFLFEMSRINHYQQRLQSLYFKKKFAERVAEVKPKVEAIRSGSEEVFRSGALKQLLEVVLAFGNYMNKGQRGNAYGFKISSLNKIADTKSSIDKNITLLHYLITIVENKYPSVLNLNEELRDIPQAAKVNMTELDKEISTLRSGLKAVETELEYQ---KSQPPQPGDKFVSVVSQFITVASFSFSDVEDLLAEAKDLFTKAVKHFGEEAGKIQPDEFFGIFDQFLQAVSEAKQENENMRKKKEEEERRARMEAQLKEQRERERKMRKAKE---------------NSEESGEFDDLVSALRSGEVFDKDLSKL-KRNRKRITNQ 1063
The following BLAST results are available for this feature:
BLAST of TCONS_00028706 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DAAM19.265e-11743.19Disheveled-associated activator of morphogenesis 1... [more]
back to top