TCONS_00028707 (transcript) - C. hemisphaerica

Overview
NameTCONS_00028707
Unique NameTCONS_00028707
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2587

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00028707 ID=TCONS_00028707|Name=TCONS_00028707|organism=Clytia hemisphaerica|type=transcript|length=2587bp
CAAAGGGTTCTCAACATGcttcttgaagaaaaattcaaacatcGAGTAAA
AGTAATATGGAAGGCTGAACAATGGAAACTCGTGCGTAAAGCTCAACAAA
TCGACGCAAAGAGTGCAAGTTCTATGCTAGATGTTTTGAAACAGAAGATT
GGTCACACACCGAGTTATGTTCATCTACTTTCGATCATGCAACATTTACT
TCTTTTACCAGTCGATGCAAAGAAAGGTTTGAGCTATTGGCGAATCATAG
ACAGGATCATCCAAGAAATTGCATTACAACAACGGGACGGTACCGATCCC
GATATGGCTCCTATTGATATCCACGTTAAACATATCATTGAAAAAATGAC
GACAGAGGACTTTAAAGATGACACGGTTTCAAAACTGGCCAAGCGTGAAA
GTGAAATGGCGGAGATGCGATCGACCGTCGAGAAAATGGCCGACAAACTC
GATAAGGAGACGAGAGAGCACGAAGAAACGAAAAAACGATGTGACGAACT
GATAAATAAAGCTAAGAAATTAGAACAACAGTTAAATGTTGAAATGGTTT
CTCGAATGAAATTAGAAGAAGTCGTGAAAGAAGTGGGCGCTTCCATTCCC
GATGATGCCAAGATCGCTAATCTAGCAAGCATGGGCGCACTTCCGCCCTC
TATGATTGCTGCAGCCGCTGCTTCTTCGCCTGCTTCCCCACCACCTCCAC
CCAATATGGGCGCTTTACCGCCTCCGCCTGCGCCCCCGGGCTTCGGACCA
CCACCCCCGCCACAACCTCCTGGTATGGGTGGTTTCGCACCACCTCCTCC
GCCACCCGCCCCTGGGGGTCCGCCTCCACCACCAGGTATGGGTTTACCAG
GcttcaacaacaaaaagaaatcgaaattaCCGAAACCATCACAACCATTG
AAATCCTTTAACTGGACCAAAATTCCTGATGTGAAGCTAAAAGGAACGAT
ATTTTCAGATCTTGACGAAAATCAGATCATCCCACTATTGGACTTCAAAA
GGATCGATAAAGCTTTCTCTGCTTACCAAAAGAAAGAGAAAGATCCGGAA
CAAGATCAAGAGGACGGTGGAAGTGTGTTGAATTTCAAACCGaaagaact
ttcattcatcgaTAACCGACGTGCACAGAATTGTCAAATCATGTTGAAAA
ACGTGAACCAACCAAACGAAGTGATCCGTGAAGCTGTTTGCACCATGGAC
GTTGAAGACAGATTGACCAGGGATATGGTCGAACAGATGTTGAAGTTTAT
CCCAACACCTGACGAAGCCAACTTATTCAACACGCACGCTAACGAATCAC
ATCAATTCGCTGCTGGTGATAGTTATCTCTATGAGATGAGCAAgaTTCCA
CACTTTGAGCAACGTTTAAAAGCTTTGTATTATCAGAAAGGCTTCAGTGA
GCGGGTCGGAGATATCAAACCTAAAATCGAATGCGTCATACGAGCATGTA
AACAAGTATCTCGCAGTAAACGTTTGAAAACCTTATTCGAAGTCATCTTA
TGTTTTGGCAATTACATGAATAAAGGGAGTCGAGCGAACGCTTCTGGTTT
CAAAGTCAGCAGTTTGAATAAAATTATTGACACGAAATCGAGTAGTGATA
AGAGAGTTACTTTGCTACATTTCATCATTACTGTACTCGAAATGAAGTTT
CCAAGCGTTTTCCAATTAGAAGAAGAATTACCCGATATCAGGAGTGCTGC
CAAAGTCAatccaGCAGAGTTAACAAAAGAATTACAGCTGCTACGAGCTG
GTATCgtagaaattgaaaaagAATTACAATACCAAAGTACACTAAAAAAG
AAAGATAGATTACCTAATGATCGGTTCGTCGAGACTGTCGGAAGTTTCGT
CAAAGTCGCCAACTTTTCCATACAAGAAGTCGACGAAATTTACAAAGAAA
TGGAAGATAGACTTGTAAagacattttcattgtttggTGAGGATCCAAAA
TCGACTGCTGGTGAAGATTTTTTCGGTGTTTTCAACGGATTCCTCAATTC
ATTCGCTGAATCAAAAGGTGAGAATGTTCAAATGCAGAAACAGAAAGAAG
AAGAGGAGAGAAAAGCCAAAAGTCTTGCACAGCAAAGAGAGAAAGAGCGT
CAACGTAGCGCGGCAAAGAAGTTGATGTCGGATAATTTATCCGCCGAAGA
TAAACGGAAATCTTTATCGGAAAGAAGTCCGGGTGAATTCGATGATTTGA
TTTCTGCATTACGGACAGGTGATGTTTTCGGTGATGAAATGACAATGTTT
AGTAAACAGGGCCGGAAAAGGACTGGGAAACAGCGGAATGCTGTCAACGC
CCCTAAAAAGATGTCGGTAATAGATCGAGACCGACGTGTGGACCAAACAG
CTATAGCGGAAATGTTATGATAAGTCACGTGATTGGTAGACCGGAAGGTG
AACAGGTTTTTAACTTGGTAGAGGACCGGATTTTGTCCGGACAGTGAAGT
TAGCGGAAGTAGTAGTTCTATTCTTGAATATTGCTTCTGTCCTTTATAAA
ATAACGAATCGAAAGCTCCATTGTATATGAATACTGGATAGTGTGCGCGA
TTTACCTCTTCGATCTGAAACCGAATTGGAGAGGTGC
Run BLAST on NCBI

transcript from alignment at sc0000698:117948..130387+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00028707 ID=TCONS_00028707|Name=TCONS_00028707|organism=Clytia hemisphaerica|type=transcript|length=12440bp|location=Sequence derived from alignment at sc0000698:117948..130387+ (Clytia hemisphaerica)
CAAAGGGTTCTCAACATGcttcttgaagaaaaattcaaacatcGAGTAAA
AGTAATATGGAAGGCTGAACAATGGAAACTCGTGCGTAAAGCTGTGAGTG
TCAGCATAAGTTTTTTTCCTTGGCTACGTTAGTTTCCCGCGAAATCTTTT
ATAGTTCGTTTAAGTTAAttatttttggatattctttTTTAGCAACAAAT
CGACGCAAAGAGTGCAAGTTCTATGCTAGATGTTTTGAAACAGAAGATTG
GTCACACACCGAGTTATGTTCATCTACTTTCGATCATGCAACATTTACTT
CTTTTACCAGGTGAGGAAAAATCGTTCATTTAAACTTTTGTTTAAATATC
CGCTGTTTTAAAATTCCTAAACGACCGCAGCATGAACGTAGATCATTCAG
CTACGGTGCTCAAGGTTGTTGGTTCGATCCCTGGTCGGGTCACTCCGAAC
GCTCTCAAAAAGGTTCCTTATGCCTctttgcttgatgctcagcaacttaa
aaaatggtaaaaactaaaaacttcgTTCCCAAATTTACTTACTTTAAATA
TCCTCCCAGTTTTCTCTCATAATGGAATGTAGTTTTTACCAAGAGAATTG
TGTCGCGAATGAGATTTAATTTCGGTCTATGGACTTATGACTCCTGTTAG
AGTCGTTTAATTTGAATCATTTTCTTGTAGGTGCCCCATGGTTTGAACGA
CCTCTAAATATCATATTCCCTTGCTTTTTTAGTCGATGCAAAGAAAGGTT
TGAGCTATTGGCGAATCATAGACAGGATCATCCAAGAAATTGCATTACAA
CAACGGGACGGTACCGATCCCGATATGGCTCCTATTGATATCCACGTTAA
ACATATCATTGAAAAGTAAGTACTGGTTCATTGTATACAGTTGATgcggg
acgagatggagtttttacaagctcttatttgatttggttggtcgtttacc
agtaataaaacaattttgttactttttctaaagaacgcttCATTTTTATT
ACTTCAAATGACCAATTATTTAACTATCTTATAAAAACTCCATCTCATCT
GGTTGATGCCTCCTTATTCGATTTTCAAGGGGAATTGGATTATCATCGGA
TTAGGGAGCGTATCGAATGGTAGGACGTCGTTTGTGAGATTTTCTTGTTG
ATGTTGGCTTTCAACTTTATCGAACAAATGGAGCGTTTCGAATAGTAGAA
CGTCGAATTAGAGAACGTCGACCTGCATTTTGTCAACTCGGACCCTTATA
TGTTGAAATGGAACTCCTTATAACTgggttaaattaaaaaaaaaaagatt
actgGACCTGTGTTACTTTGTTGCGCTTACTACATCTTCGTATTTTTCAA
CCTTCCACTTTGGAAATCAAGGTGTAGTTCGACATTTCTTTCAACGTAAC
CCTCTTCGTCTTACTATGCAATAACAGAGCACAATATTCCAATATTCCAA
CACGCAAGACTTAGTAATAGTGAAAAATTCTTGTCGTTTTTCTAGAATGA
CGACAGAGGACTTTAAAGATGACACGGTTTCAAAACTGGCCAAGCGTGAA
AGTGAAATGGCGGAGATGCGATCGACCGTCGAGAAAATGGCCGACAAACT
CGATAAGGAGACGAGAGAGCACGAAGAAACGAAAAAACGATGTGACGAAC
TGATAAATAAAGCTAAGAAATTAGAACAACAGTTAAATGTTGAAATGGTT
TCTCGAATGAAATTAGAAGAAGTCGTGAAAGAAGTGGGCGCTTCCATTCC
CGATGATGCCAAGATCGCTAATCTAGCAAGCATGGGCGCACTTCCGCCCT
CTATGATTGCTGCAGCCGCTGCTTCTTCGCCTGCTTCCCCACCACCTCCA
CCCAATATGGGCGCTTTACCGCCTCCGCCTGCGCCCCCGGGCTTCGGACC
ACCACCCCCGCCACAACCTCCTGGTATGGGTGGTTTCGCACCACCTCCTC
CGCCACCCGCCCCTGGGGGTCCGCCTCCACCACCAGGTATGTATTggaat
taaaacaaaatattatctttcaaaggtttttcaaaatttcgctCCGATAA
TCTCTAAACTTTCGAGAAACTAAAGCTAAGATACACTGACGCGTTGAAAG
CGCGTTATAAATCACACGGTGTAGTAAAATGTGTTCAATTTCTACAATGG
CAATAAGAAGATTGCAGAGCGTTTTCGatagatttcattttttctttgca
aaagaaAGGTACGAACGTTTTGTttaacacgttttttttcaaTGCTTGAC
TGCAACGATTCGCAATATTGCATCATCGCGACTCCTTCTACTTTTAGGTA
TGGGTTTACCAGGcttcaacaacaaaaagaaatcgaaattaCCGAAACCA
TCACAACCATTGAAATCCTTTAACTGGACCAAAATTCCTGATGTAAGTAT
CCTTGTTCCTGATCTAATAATCTATTATGCAGGTGGTGCACGCTCTATTA
TTTGCCCCAATGTGGGGGGGGGCAGTCcagcaaattgaccgacggttATT
TAAGGGTACTTGAGGCGTACAAACTTtggcgagcagaaactttcgggatt
ttcgcgaattttggccttttttgcgaaagtaaatgtctttgaaaattcta
aacgGGACAATTCGcgaaaaaattctcaaaaaagttgaaaatctataaaa
cctcgaaATTGTAATAAATATCAAACTGTCGGCATGTTATTATCCTTTAA
TGCAAttttaaagtcgaagagcaaccgTCTTTAGCGAATTTAAGGAATAT
ctttcacttttaaggcaattttttttcgaaaattctcatttttatcctac
gattcgcgaaagtttatgctcgcgaaaaacattttttccttaAATTCGCG
AAAGCAAATGTCGTGAATGTGGACTTTCGAtgaatgcactgtaagggtgg
aagtTTCAGCAAATCTATTTTTTTGCTCtatgaaaagttgaaaatttgat
aaaaatgcactgtaagggtataaattttaccttttttgctgcactgtaag
gatgcAATTctaaaagtcatttttttcGCTGTGCATActgtcagttggta
aacccactgcccccctcCGGATTTAGGGGGTTTTTCGTTTacccaataca
cgtttttttttttttataaggaaccttaactttgctctgagcctggaatt
ccttatttttacagagaatttaagcctcaaagttccttatcgagttcctt
atttacatagctgctaattTTGGATAACCAtatctcttactgttccttaa
aacttgttttcttattctcagcctgagcagttcctaaaccATTCctaatt
ttttggaccattttcagcctcgagttccttataaacgtgttccttatata
aaaaaaaacgtggaACGCAAACTTagttattttttactttttccacACAC
AGGTGAAGCTAAAAGGAACGATATTTTCAGATCTTGACGAAAATCAGGTA
AGTAGATTATTGTGGTTTaaacccccggggggggtactacccttgtcgac
caacgggggtgctccgctgaNTTAAACCTAATAATCTAAAATTTAAACAT
AATATTACTATTATATtataggctgcacgcatcccctctgatatgttttg
atataggggctGGGTATCTTGTAtaaaattctcgtccgagagttaatcaa
aatttgaatctcTAGAGGTTAATAAAATCATTGGATTTCTGaagcttttt
aagaaaattgaaatagaTTACCCTGAAattggggtaactctcggacagAA
ATTTTATGTACGATACGCTGtatcaaaatcaattctggGGATGTGCACAG
TCTATCTTTTACCATGATGTGGtttcaaaaagctttcaaaaatcaaagaa
ttttaATCTATGCGTGTTGTTTTTTACAGATCATCCCACTATTGGACTTC
AAAAGGATCGATAAAGCTTTCTCTGCTTACCAAAAGAAAGAGGTTCGTAA
TACCACTTGAAACAAACGACATCTTCTTCGATATTTTGATTAATTAATTC
TAAGCTTTcatttgttcattcttttacagAGAGATTGAATACTTCTGGAG
GAATTTTTAAACTGCTAATGTatagttttatataattttatagtttttaa
aaatagattGCTAGTTTTGTGGTCTAGGGCGTAGGGCGAACCTTATTTTT
ATCATAGTAGTTTGGAGAACAATATTgagtttttaagttttaatttgatt
taatttttaagtAGTTTATAATTTCTAACACCAGGCATCTGCTTAGATAA
GAATCAAGCTGCTAAACGAGTTCTTTCGAAAtcctaggggggggggtagt
tGGGCAAAAATGGGAGTCTAAGAAGAGTGAAAAGTCATCAAGAAAGTAAA
GATTTTTcgaaagtattgaaaaattttcattgaaaatcgaAGACATTTTG
GTGAAAATGTTTCTCCAAGGgtcttttttaaacaatttttttctctctaa
aTGGATCGCTTTTTCAGCACAAATCAGTCTCTCTATAAAGGGTAGGGGCT
TTAAGGTCTGGTACGCACATATCCAGCATTCCTCAACCctaatacccccc
cccccccccctcccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNCCCCCCCCCCCGCCCGTTCGAAATATTGTACTTGGTTTGT
ACTTGGTTTGGAATAATTGTAAGACAGGTTATGAGGATGTTTATATAACT
TTACTCTTATTGTTCTTCTCTTTTAGGAGTATGAACAGCGAGACTTGGTA
AGGTTGCTTATTCAGCACTGTTAGAAGATTTGCTTGCTCCGACAGATTCA
GATTATTCAATTTGTTTGAGTCGTTGACAAGATAGTGAAAATTTGTATTA
TAGTTCTTGTTGCTTGTTTAGGAGGTTGTTTACTACACAGTTATTAATGG
ATTCTTTACTAtgaaatatctttctttttctaGACTAAAACCAAGAAATC
TGAAAAATCAGTACGTAATAATCATATTATAATTCCGTAAAGCTtataat
gtataattttaaaaccGACGTAACTATGTACTGTAAGGTATTATAAAATT
AAACTTAAACATCATGAATTCTAAATCCTTGATTGAAAAATAACTGCTCT
TGTATAATATCATCACCATTATGAGtaatttttaaataactttaacTGGG
TAATAAATATGCTTGTCAATACATGAACATCTTAATCGTATAAATAAATC
TACATTATAAAGATTCTTTCTATCATTCACTGGAAACTGGTCATAATTTC
TCTCGTTAATTTTCCGTTACTGTAGAAAGATCCGGAACAAGATCAAGAGG
ACGGTGGAAGTGTGTTGAATTTCAAACCGaaagaactttcattcatcgaT
AACCGACGTGCACAGGTTTGTTTGATTAATTGTATTACCTTAcccttaaa
agaagaaatttttgcggaatttaattttgctgtTCACAACTCAAAATTCG
NGAGAAGAAATATTCGtggaaagaaattttcgcggagtTTAATTTTTCGG
TTCACAGCTTAAAATTTGGAAGTTttacggaatttaatttcgcggttcag
aggaatttttgtttaaaatatagcctattttgccctaaaaagaccaattt
tataggtgattttttaaatcatgagaTTATTCGTGTTTCGCGGAAATTTG
TATACAGTANaaaaagaccaattttataggtgattttttaaatcatgaga
TTACTCGTGTTTCGGGGAAATTTGTATACagtaattaatttcaaaattca
aaacttccGTATTATTGACGGGTGTTCCCATTTCCATGTTTCGtctttgc
tgaaattttgaagaatccGCTGAAGTTTTTTTGTATGTATACTTTGCATG
TAAAAACGATTTAAAGTTCTACCGACGATTTTCTTTGTGTTctttaagaa
aaatctttttttgctgtgattatattttatttagcttcCAATCAGAATTA
CTTATCTGCTAGATACCTTAAGGAAACtatttttaaagtaatttttgCGG
TCAAGAAAAGATTTGCATTTCGCGGGAAtcaattttcgcgtttttgcccc
tttctgacaaatttctttcattatcCTAGGGATTTATCAGATTTTCTaat
aaaattagcaaaaattatatttcgttgactcaaatttttgcaaagcaaaa
attaattcctgtaaGGTAGCACCGCTCCTTTCGAAATGAAACCAACATTT
AAAACCTGATCTCAATACTGTCCAAACATACTAGTAGGTATAGTTTTTAA
AAGGAATAAATTCACTTTAAATAGCCACTAAACATTTCCCTTTTCTCTTA
TGATTTGAAGAATTGTCAAATCATGTTGAAAAACGTGAACCAACCAAACG
AAGTGATCCGTGAAGCTGTTTGCACCATGGACGTTGAAGACAGATTGACC
AGGGATATGGTCGAACAGGTCTGTCTTTCCTTCCTTTTCCCTCAATATCT
CAACATTATATCTACCTGCGACGATTCCTTTaaactttgatgaaaatttc
ttaGTTTTCTTTCAAACCTTTAAAAGGATACTGGTTtcttttgctcaagt
ttttccCATTGTTTTCTGTTTATCCTTGCCaggaatttttgaaatattaa
tcTTAAGAGAACATCTCTAGATTACTATAATCAAATTTTTCCTTCTTCCT
TCAGATGTTGAAGTTTATCCCAACACCTGACGAAGCCAACTTATTCAACA
CGCACGCTAACGAATCACATCAATTCGCTGCTGGTGATAGTTATCTCTAT
GAGATGAGCAAGTGAGtctgctttttttttatttgacaacATTTATTGGT
AGCTCTGCTTTAAACGTTAAGATAAACTTTATTAAATTAAAAATGAGTTG
GAGGGCAAAAAACAAAACTCATTTAGTCTCTAGGTTTAATTTTGGGTTTC
AAATATGGTAGATTTATTTTTTAGTAAAAGAATACGATCTTtatttcagg
caaaaaaatatatatgtgAAATCTGTTGATATGGGCAAATTGGGGCGGAA
ATTCTTAACAAATTCTGATTTTAACCATGGAGTTTATCAGCAAAGAAtgt
tcttttcatttctttaggaTTCCACACTTTGAGCAACGTTTAAAAGCTTT
GTATTATCAGAAAGGCTTCAGTGAGCGGGTCGGAGATATCAAACCTAAAA
TCGAATGTAAGTATAGTCGGCGCTCTCTAATACGACGATCTATTACTTTA
ATGTGTTTAATtttcgcagggattaaatttcgcggatttcgtgCATTTGG
GTGTCATCCTCGAAATTAAGTCcgaatggaaatttggaaaggccttatcc
gcgaaatatttctgaacaaaacttttaaaatgtcaaataactACTTTTTA
AATGGTTATTGGTACCAAAGAAACGCTAATAAtacgtatttcaacaacca
aaatgcattatttgacattaaaaggtacaaaatcgtgaaaatattgtcac
cCAATAGTAACATCCGCAAAATTAAGCCCTCCCCTGAAATCTTAACTAac
atttcgcggatgagctcaaccgcgaaattttatccccgcgaaaattaatt
ccattaaagtattcgatgaaaaatcttttctcCTTCAAAATCGGATTAGA
GAATCATCAAATATATGCCTATATAAATCGATCATTTGCGATTTTAGCAC
TTATaggcttatgcaaataaatggatAGAAATAGAGATCAAATAAGTCCC
ATCAGGCACCAAGCCTTCAAtgctatattttgtttttttcttccagGCGT
CATACGAGCATGTAAACAAGTATCTCGCAGTAAACGTTTGAAAACCTTAT
TCGAAGTCATCTTATGTTTTGGCAATTACATGAATAAAGGGAGTCGAGCG
AACGCTTCTGGTTTCAAAGTCAGCAGTTTGAATAAAATTATTGACACGAA
ATCGAGTAGTGATAAGAGAGTTACTTTGCTACATTTCATCATTACTGTAC
TCGAAATGAAGGTGATTACCATAATGTTCCATATCCAATTACCAATTACC
ATAATGACTACCAGAAATTATAATTACCATCAGTTTTTCAaatccttttt
tcaaaaaatatcaatttccaGTCCGACAAAACTTGCGTATTTGCTTTGTT
CAATCTGACTGAAGCCAATAAATACTTCCAATACTTCCTACTGTAATTCG
AGCAGGTTGAATTTCACATTCAAGCTCGAAGAAACTCTGCAGTAAACAAC
CGTATAGCTCTTAAGGCCTATCTAGGCACAGCTCGAGTAACAAACCCTTC
CACTAATATTCTAAAGAAATCTATATCAAACCTCCGTTCTTCatgtttgt
ttttcaatttcttctttagTTTCCAAGCGTTTTCCAATTAGAAGAAGAAT
TACCCGATATCAGGAGTGCTGCCAAAGTCAagtaagtcaaaaaaaaaaaa
attatgctctaattgatttttataaaataggcTCTCAGCCTcacttgttt
gttgtttttttgacataattcatcattaaggccggtctccacttgcgtgc
GCTGGGATAGCACCTTTTGgcaaaagattacgtcataaaaatgtagtgcg
cgctcgaaaaaaagttgaatacatttcaacttttttcaaccgttacgtca
gatcgcgccaatgaaacggtttcaatttttctttgaccaatagcgtggaa
gctctgatcgaaaaagtgcgatcgcagcgcgcgcaagtggagaccggcct
ttagtcTTTCTCGGAAGCCTCCTCTCTAACAGCTCTAATAGCTCTATATA
GTTAGCCCAGTCATCAGTTTTTATCAGATGATCTTGAGAGCCGCTTCTTG
CAGGAAGCCAATATTTGACATgcgttctttaatttttttttcagtccaGC
AGAGTTAACAAAAGAATTACAGCTGCTACGAGCTGGTATCgtagaaattg
aaaaagtaagaaatttCTACCTTTTGGtgcctcaaaaaattaaaatttgt
ttgaaatgaGGAGGGAGAGGCCTACATACTATATGGATTACCCCATTTAG
TGCCCAcgccatgaaattgaaattatatgAATATAGAGTCTAAAGGAGGC
gcaacaaaaatttttactttgcaaAAGTAAGCACCCCCGCAGTGGCTTGG
GTCCTGCAATTTTGTTTAGTATATCTGAATATCCCTGGTTACTGTAGAAT
TCCTAACAAACATTgtcctttttttgtttcataggAATTACAATACCAAA
GTACACTAAAAAAGAAAGATAGATTACCTAATGATCGGTTCGTCGAGACT
GTCGGAAGTTTCGTCAAAGTCGCCAACTTTTCCATACAAGAAGTCGACGA
AATTTACAAAGAAATGGAAGATAGAGTAAGGATTGTACTCAAAGCTATCT
CGGTATTGTGATACCATAGTCAATATAAAAAATCCCGGTCTGGAaagctt
ttgtttctttcttttgttaacAGTTAAAGCATGCGTTCGCAAATCGActt
gttttgcatattttttgaTCGTGTGATTTGAAATTAACCAATCCCAAGGG
Gagaacgtgatcaaaaagtatgcaaatcgcaacttgtcttttatttataa
caaaggaaaatttgacaaaaaaagctaaaacaatacattgctagaccaga
gttttttataatgactatggtggTGATACACTCTTTtcgagatacataaa
attgttgCTGATCAAGAAAgttcaaatgtttgaagaacaatgtttgacgg
tttgctcccagctttacatgtctttttataagaacatccgaaaatTCATA
AAAGTCTTTgggtgttcttaattttttgagtttttaaagtctaaaatgtt
ctttaaaattttgttatttttcaccgttttgtgagtatttttgtgccaTT
GCCTAAAAGTTTAGTGTTATTGAGTTCGTGAAGCCTAGAAATGTTTTGAA
CTTTATTTTGGCAATTGAAAcctcatgtttttattttgttcctATGAAAC
GAAAAGATGTCCTTTCAAAACATAGTTGCCGAAATACTTCTTACATGAAG
CTTTGGAATTTTAAATGGAATTCACTCTCAGTATCCTTTGTTTGTACATA
TTATACCATCAAAAGGttgatgaatattttttgagttcattattattatt
tacaattttttattttttttgacagCTTGTAAagacattttcattgtttg
gTGAGGATCCAAAATCGACTGCTGGTGAAGATTTTTTCGGTGTTTTCAAC
GGATTCCTCAATTCATTCGCTGTAAGCTTTTGAAATGACAAttatcaaat
attttaaaaagtcaGCATATGTCATCTCTAGTTCATGTGCTTACTCTAGC
ACCGTGCAAAAAAACCCTGCTAATTATTCGCTAGTTACCATTTCTGCATA
ATATCAAGAACTTGGGCTCTTcctagactgggaatccagtcgtttataac
gtttttgttgaaagcggaaaatttttatgtcgggatatggttaaaataaa
cgactgggctaaggtggtttccgtagcttacgggagttccagcagggccc
gcagatttctgcggggtgagaaaacaatcatatacaacaaaatatataaa
caaataaaaatttcagccaatgagaatttctaagtgaaagaaaaaaaaaa
aaaaaacaaatcaaaccaacaagaccccctgaaaatgttatccaaaaaca
tgaaaaaagagaatttttatgaaaagtttgttgtgtacaaaatattctag
acgactatattgatgcttctgtcaagttttctacttcctattttttaccg
agttaagtcgtctagcatgctagactaggctcttccagaaaatgttcgtg
tATGGAGGGTGGAGGGTACATAGGGgctagtgaaaaatctacaaaattta
ccttgtccgggggtaattttgaATCAACTGGTAATTTTGGTCAACTGATG
CCTGTTCGGGGGTCAAAAGTTACAATGTTCGGGGGGgagggtaaatttcc
aaaaaattctcCACCCCTTGTCtgtttttagttattttttaattaatttt
cgtTTTCGTCACAGGAATCAAAAGGTGAGAATGTTCAAATGCAGAAACAG
AAAGAAGAAGAGGAGAGAAAAGCCAAAAGTCTTGCACAGGtaaacaaaat
tgtaaaaataatttgctGGTAATCCCTTTTCACATACATTCaaagtattt
tagattttgaaggTAGATTTTAAATGAccatcaatagacctttttataaa
tGATGTCACGAGCAACGCTTGTCTCCTCTTCAAcatattagcgaggttaa
gcaattGTTTATTTAGACTGTTCAATGTGATATTGTAGGTCTATACATGa
gatttcacttgcatggtttgctttggcaagttatggCCTACGGTATTGCA
TTGAACGGTCAATATAAACctgtgcttaacctcgctattactATGGTAAT
TGACTCCTGTTAGAGGTGTTTATAAGAAGTTTACTCTGTTATAAAAGTAA
CACCTGAAGACTctaggaatttgaaataaccttggtaatgttttcaaaac
gaggcagtggTTTCActcaaataaaattataaaaggCATAATTATTCAAC
GAGGAGAAGCAGTTTCCTGTCTCCCGAAAACACTATAAAATAAGCCACTA
AAATctcttttaaaggttttgtttttacataagtctttccgtttcatatc
agacacatatttgaTATCAGGACAGAGTCtagctattgttatattatgtt
gATATaagcaagaaaatgtttttcttttcctctttctgaccaatcttgct
ccacatacgtgTCAGTCCAAtgatgaaaaagcttgtgaattaaaagtgAC
GAGTAAAGCAAacgttatcactcttatttaaaaacaaaacctttaaatca
aaagtcactcaaatttttttttcttataactttaGCAAAGAGAGAAAGAG
CGTCAACGTAGCGCGGCAAAGAAGTTGATGTCGGATAATTTATCCGCCGA
AGATAAACGGAAATCTTTATCGGAAAGAAGTCCGGGTGAATTCGATGATT
TGATTTCTGCATTACGGACAGGTGATGTTTTCGGTGATGAAATGACAATG
TTTAGTAAACAGGGCCGGAAAAGGACTGGGAAACAGCGGAATGCTGTCAA
CGCCCCTAAAAAGATGTCGGTAATAGATCGAGACCGACGTGTGGACCAAA
CAGCTATAGCGGAAATGTTATGATAAGTCACGTGATTGGTAGACCGGAAG
GTGAACAGGTTTTTAACTTGGTAGAGGACCGGATTTTGTCCGGACAGTGA
AGTTAGCGGAAGTAGTAGTTCTATTCTTGAATATTGCTTCTGTCCTTTAT
AAAATAACGAATCGAAAGCTCCATTGTATATGAATACTGGATAGTGTGCG
CGATTTACCTCTTCGATCTGAAACCGAATTGGAGAGGTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016283XLOC_016283Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028707-exon-sc0000698-1491911889:117948..118040TCONS_00028707-exon-sc0000698-1491911889:117948..118040Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1510915933:117948..118040TCONS_00028707-exon-sc0000698-1510915933:117948..118040Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1575043694:117948..118040TCONS_00028707-exon-sc0000698-1575043694:117948..118040Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1491911889:118140..118257TCONS_00028707-exon-sc0000698-1491911889:118140..118257Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1510915933:118140..118257TCONS_00028707-exon-sc0000698-1510915933:118140..118257Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1575043694:118140..118257TCONS_00028707-exon-sc0000698-1575043694:118140..118257Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1491911889:118680..118812TCONS_00028707-exon-sc0000698-1491911889:118680..118812Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1510915933:118680..118812TCONS_00028707-exon-sc0000698-1510915933:118680..118812Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1575043694:118680..118812TCONS_00028707-exon-sc0000698-1575043694:118680..118812Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1491911889:119443..119933TCONS_00028707-exon-sc0000698-1491911889:119443..119933Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1510915933:119443..119933TCONS_00028707-exon-sc0000698-1510915933:119443..119933Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1575043694:119443..119933TCONS_00028707-exon-sc0000698-1575043694:119443..119933Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1491911889:120245..120339TCONS_00028707-exon-sc0000698-1491911889:120245..120339Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1510915933:120245..120339TCONS_00028707-exon-sc0000698-1510915933:120245..120339Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1575043694:120245..120339TCONS_00028707-exon-sc0000698-1575043694:120245..120339Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1491911889:121350..121394TCONS_00028707-exon-sc0000698-1491911889:121350..121394Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1510915933:121350..121394TCONS_00028707-exon-sc0000698-1510915933:121350..121394Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1575043694:121350..121394TCONS_00028707-exon-sc0000698-1575043694:121350..121394Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1491911889:121827..121889TCONS_00028707-exon-sc0000698-1491911889:121827..121889Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1510915933:121827..121889TCONS_00028707-exon-sc0000698-1510915933:121827..121889Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1575043694:121827..121889TCONS_00028707-exon-sc0000698-1575043694:121827..121889Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1491911889:123273..123362TCONS_00028707-exon-sc0000698-1491911889:123273..123362Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1510915933:123273..123362TCONS_00028707-exon-sc0000698-1510915933:123273..123362Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1575043694:123273..123362TCONS_00028707-exon-sc0000698-1575043694:123273..123362Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1491911889:124308..124415TCONS_00028707-exon-sc0000698-1491911889:124308..124415Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1510915933:124308..124415TCONS_00028707-exon-sc0000698-1510915933:124308..124415Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1575043694:124308..124415TCONS_00028707-exon-sc0000698-1575043694:124308..124415Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1491911889:124652..124758TCONS_00028707-exon-sc0000698-1491911889:124652..124758Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1510915933:124652..124758TCONS_00028707-exon-sc0000698-1510915933:124652..124758Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1575043694:124652..124758TCONS_00028707-exon-sc0000698-1575043694:124652..124758Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1491911889:125065..125153TCONS_00028707-exon-sc0000698-1491911889:125065..125153Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1510915933:125065..125153TCONS_00028707-exon-sc0000698-1510915933:125065..125153Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1575043694:125065..125153TCONS_00028707-exon-sc0000698-1575043694:125065..125153Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1491911889:125744..125958TCONS_00028707-exon-sc0000698-1491911889:125744..125958Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1510915933:125744..125958TCONS_00028707-exon-sc0000698-1510915933:125744..125958Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1575043694:125744..125958TCONS_00028707-exon-sc0000698-1575043694:125744..125958Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1491911889:126317..126378TCONS_00028707-exon-sc0000698-1491911889:126317..126378Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1510915933:126317..126378TCONS_00028707-exon-sc0000698-1510915933:126317..126378Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1575043694:126317..126378TCONS_00028707-exon-sc0000698-1575043694:126317..126378Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1491911889:126842..126902TCONS_00028707-exon-sc0000698-1491911889:126842..126902Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1510915933:126842..126902TCONS_00028707-exon-sc0000698-1510915933:126842..126902Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1575043694:126842..126902TCONS_00028707-exon-sc0000698-1575043694:126842..126902Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1491911889:127182..127322TCONS_00028707-exon-sc0000698-1491911889:127182..127322Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1510915933:127182..127322TCONS_00028707-exon-sc0000698-1510915933:127182..127322Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1575043694:127182..127322TCONS_00028707-exon-sc0000698-1575043694:127182..127322Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1491911889:128123..128218TCONS_00028707-exon-sc0000698-1491911889:128123..128218Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1510915933:128123..128218TCONS_00028707-exon-sc0000698-1510915933:128123..128218Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1575043694:128123..128218TCONS_00028707-exon-sc0000698-1575043694:128123..128218Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1491911889:129012..129086TCONS_00028707-exon-sc0000698-1491911889:129012..129086Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1510915933:129012..129086TCONS_00028707-exon-sc0000698-1510915933:129012..129086Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1575043694:129012..129086TCONS_00028707-exon-sc0000698-1575043694:129012..129086Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1491911889:129883..130387TCONS_00028707-exon-sc0000698-1491911889:129883..130387Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1510915933:129883..130387TCONS_00028707-exon-sc0000698-1510915933:129883..130387Clytia hemisphaericaexon
TCONS_00028707-exon-sc0000698-1575043694:129883..130387TCONS_00028707-exon-sc0000698-1575043694:129883..130387Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000698supercontigsc0000698:117948..130387 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.02755	2.50202	2.99965	1.8047	4.50493	4.68235	5.80322	8.80336	6.34809	5.90454	3.94885	4.66577	8.02104	4.54931	3.72312	5.03972	8.27154	8.8246	3.44772	8.13531	5.44258	6.87976	6.34617	7.04905	40.6608	20.5874	5.59762	7.76457	5.68433	3.80026
Blast
[Close]
BLAST of TCONS_00028707 vs. Swiss-Prot (Human)
Match: DAAM1 (Disheveled-associated activator of morphogenesis 1 OS=Homo sapiens GN=DAAM1 PE=1 SV=2)

HSP 1 Score: 382.874 bits (982), Expect = 3.023e-116
Identity = 202/470 (42.98%), Postives = 300/470 (63.83%), Query Frame = 1 
Query:  907 FNWTKIPDVKLKGTIFSDLDENQIIPLLDFKRIDKAFSAYQKKE--------KDPEQDQEDGGSVLNFKPKELSFIDNRRAQNCQIMLKNVNQPNEVIREAVCTMDVEDRLTRDMVEQMLKFIPTPDEANLFNTHANESHQFAAGDSYLYEMSKIPHFEQRLKALYYQKGFSERVGDIKPKIECVIRACKQVSRSKRLKTLFEVILCFGNYMNKGSRANASGFKVSSLNKIIDTKSSSDKRVTLLHFIITVLEMKFPSVFQLEEELPDIRSAAKVNPAELTKELQLLRAGIVEIEKELQYQSTLKKKDRLPNDRFVETVGSFVKVANFSIQEVDEIYKEMEDRLVKTFSLFGEDPKSTAGEDFFGVFNGFLNSFAESKGEN---VXXXXXXXXXXXXXXSLAQQREKERQRSAAKKLMSDNLSAEDKRKSLSERSPGEFDDLISALRTGDVFGDEMTMFSKQGRKRTGKQ 2283
            FNW+K+P+ KL+GT+++++D+ ++  +LD + +++ FSAYQ+++        K  E D  D       K KELS ID RRAQNC I+L  +   N+ I+ A+ TMD ++ L +DM+EQ+LKF+P   + +L   H +E  + A  D +L+EMS+I H++QRL++LY++K F+ERV ++KPK+E +    ++V RS  LK L EV+L FGNYMNKG R NA GFK+SSLNKI DTKSS DK +TLLH++IT++E K+PSV  L EEL DI  AAKVN  EL KE+  LR+G+  +E EL+YQ   K +   P D+FV  V  F+ VA+FS  +V+++  E +D   K    FGE+      ++FFG+F+ FL + +E+K EN    + ++++E   R    L +QRE+ER+   AK+               +    GEFDDL+SALR+G+VF  +++   K+ RKR   Q
Sbjct:  613 FNWSKLPENKLEGTVWTEIDDTKVFKILDLEDLERTFSAYQRQQDFFVNSNSKQKEADAIDDTLSSKLKVKELSVIDGRRAQNCNILLSRLKLSNDEIKRAILTMDEQEDLPKDMLEQLLKFVPEKSDIDLLEEHKHELDRMAKADRFLFEMSRINHYQQRLQSLYFKKKFAERVAEVKPKVEAIRSGSEEVFRSGALKQLLEVVLAFGNYMNKGQRGNAYGFKISSLNKIADTKSSIDKNITLLHYLITIVENKYPSVLNLNEELRDIPQAAKVNMTELDKEISTLRSGLKAVETELEYQ---KSQPPQPGDKFVSVVSQFITVASFSFSDVEDLLAEAKDLFTKAVKHFGEEAGKIQPDEFFGIFDQFLQAVSEAKQENENMRKKKEEEERRARMEAQLKEQRERERKMRKAKE---------------NSEESGEFDDLVSALRSGEVFDKDLSKL-KRNRKRITNQ 1063
The following BLAST results are available for this feature:
BLAST of TCONS_00028707 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DAAM13.023e-11642.98Disheveled-associated activator of morphogenesis 1... [more]
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