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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028709 ID=TCONS_00028709|Name=TCONS_00028709|organism=Clytia hemisphaerica|type=transcript|length=553bp
TTAAACGAGCATAGATTTTCACAAATCGTGGTAcccataaaaatgaaata
ttaacGCAAATCAGCATAAAAAGTGACAAACTTTTTCTATCTCTATAAAG
ATGCCCCCATCGGTTGGAGGGTTTTCGTGGCGCATTATggcataaatttt
tgaaaaatatggcGTAATGGCGTGCAGGTATTAATTCTGAGGCCAATAga
tgtttctatttttttgatttcagatGGTTCAATTGGTGGCAGACACTTTA
AAGAATGTGCCTGGAAATTATCAACACATACAAATAGTGGCTTGCTTCAG
GATTGCAAGTTTACAAAATCAAAGACCGACTCATACTTAATGGTGTCAAT
CTCTTCAAATATATATCAAGGAAAGGCTCAAGCATGCAGTCGATGGTTTG
TCACCTTTGATGGAAATGAATGTTCTCCTTACCCAATAGACCAGGTGTAC
TACAGTAACATTTCGAATGGTGACCACATCCCGTTCACAATGAAAGGTGT
TTGTAAAATCAACAAATCAGGCGTTGTGAGTGTTGGATTCAACGTTGGGG
TAT Run BLAST on NCBI transcript from alignment at sc0000698:143229..144944+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028709 ID=TCONS_00028709|Name=TCONS_00028709|organism=Clytia hemisphaerica|type=transcript|length=1716bp|location=Sequence derived from alignment at sc0000698:143229..144944+ (Clytia hemisphaerica)
TTAAACGAGCATAGATTTTCACAAATCGTGGTAcccataaaaatgaaata
ttaacGCAAATCAGCATAAAAAGTGACAAACTTTTTCTATCTCTATAAAG
ATGCCCCCATCGGTTGGAGGGTTTTCGTGGCGCATTATggcataaatttt
tgaaaaatatggcGTAATGGCGTGCAGGTATTAATTCTGAGGCCAATAga
tgtttctatttttttgatttcagatGGTTCAATTGGTGGCAGACACTTTA
AAGAATGTGCCTGGAAATTATCAACACATACAAATAGTGGCTTGCTTCAG
GTATGGCTTTTatcaatgttaaaaattttgatgtattgATAATAACCATA
GCAGAGCATTTACTGGTATATCTTATTAGTGTTGCGAATCCTATGAAAAT
ACCAAGCTTCGAGGGGTGGAGTGCAGCTTGCAGCTGATAGATTAAGGGCT
CTGAGCACagtcaaaaatttgattttagtatttgaacatgaaagttatga
tttaggttctttaacacttttaacaattAGTTGCcgttataaattgcttt
ttagtcAAATTCCTTTTAAGAGTAATtgagaatttaattgcaaaaatgac
gccatgaactttaaaaaaaggttaaaaatatgttgcattaccctctttta
taaaaagtgctaagtcaatgggtaattaacctttttgtttcgaagttttt
tcaaactgtccgcaaagtaTTGaacagtttttaattttttggaaaatttt
tctaaattaatgcatcaaaagttattagctattttttctatcaaaaaaaa
agtttgaatgaaaaattggtcaaaaagcactatttacaAGGTTTTGTGAC
AAATAAGCTTTAcgaaaaatgttccaaaaatatattttaagatCAGTAAA
ATATACATCATCTACCTGAAAAATAATGTTTCTTCGCCGACAATAAGCtg
ttcaaaattgaaatactcttcctcgcaaaagccttcattttcttctccat
caaattttttcacagcGATTCTCCAATTTTCCAACTCAAGGATAACTGGC
CTAACATAAAATGTAAAATNttcaaaattgaaatattcttcctcgcaaaa
gtcttcattttcttcttcatcaaactttttcactGCGATTCTCCAATTTT
CCAACTCAAGGATAACTGGCCTAACATAAAAGGTAAAACATGCCACCGTT
TTttgggctacatcaagtaggaatttatattttgtacgtggcaaatataa
attcaaaatggtcagagcccttaaggccCTCCTTAAGCATATTACTATAG
TGGgatcaaaaaagaagaataatTGTTCGAAACAATATTATTGTATGTAT
TTCAAAGGGATGTTTACTGTGTGATTTCTTATTCAATCTTTCAAATGAAC
AGGATTGCAAGTTTACAANGATGTTTACTGTGTGACTTCTTATTTAATCT
TTCAAATGAACAGGATTGCAAGTTTACAAAATCAAAGACCGACTCATACT
TAATGGTGTCAATCTCTTCAAATATATATCAAGGAAAGGCTCAAGCATGC
AGTCGATGGTTTGTCACCTTTGATGGAAATGAATGTTCTCCTTACCCAAT
AGACCAGGTGTACTACAGTAACATTTCGAATGGTGACCACATCCCGTTCA
CAATGAAAGGTGTTTGTAAAATCAACAAATCAGGCGTTGTGAGTGTTGGA
TTCAACGTTGGGGTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028709-exon-sc0000698-1491911889:143229..143528 | TCONS_00028709-exon-sc0000698-1491911889:143229..143528 | Clytia hemisphaerica | exon |
| TCONS_00028709-exon-sc0000698-1510915933:143229..143528 | TCONS_00028709-exon-sc0000698-1510915933:143229..143528 | Clytia hemisphaerica | exon |
| TCONS_00028709-exon-sc0000698-1575043694:143229..143528 | TCONS_00028709-exon-sc0000698-1575043694:143229..143528 | Clytia hemisphaerica | exon |
| TCONS_00028709-exon-sc0000698-1491911889:144692..144944 | TCONS_00028709-exon-sc0000698-1491911889:144692..144944 | Clytia hemisphaerica | exon |
| TCONS_00028709-exon-sc0000698-1510915933:144692..144944 | TCONS_00028709-exon-sc0000698-1510915933:144692..144944 | Clytia hemisphaerica | exon |
| TCONS_00028709-exon-sc0000698-1575043694:144692..144944 | TCONS_00028709-exon-sc0000698-1575043694:144692..144944 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000698 | supercontig | sc0000698:143229..144944 + |
Blast
The following BLAST results are available for this feature:
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