TCONS_00028736 (transcript) - C. hemisphaerica

Overview
NameTCONS_00028736
Unique NameTCONS_00028736
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length192

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00028736 ID=TCONS_00028736|Name=TCONS_00028736|organism=Clytia hemisphaerica|type=transcript|length=192bp
ATTTTGTATAATCATGATACGAAACTTCTacatttattcttattttttat
gaattgtGATTCCCCAAGGATTGAATTGTTCTTTGATTCGTAATCTTCTA
GGTTTTCTTTTGTCATGCCTAATTTACGGCCATATTCAATCCCTTTTTTC
CAAGATGTATAttctttaacttgttcttatgtTGCAATTACA
Run BLAST on NCBI

transcript from alignment at sc0000700:127906..128097

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00028736 ID=TCONS_00028736|Name=TCONS_00028736|organism=Clytia hemisphaerica|type=transcript|length=192bp|location=Sequence derived from alignment at sc0000700:127906..128097 (Clytia hemisphaerica)
TGTAATTGCAacataagaacaagttaaagaaTATACATCTTGGAAAAAAG
GGATTGAATATGGCCGTAAATTAGGCATGACAAAAGAAAACCTAGAAGAT
TACGAATCAAAGAACAATTCAATCCTTGGGGAATCacaattcataaaaaa
taagaataaatgtAGAAGTTTCGTATCATGATTATACAAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016299XLOC_016299Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028736-exon-sc0000700-1491911889:127906..128097TCONS_00028736-exon-sc0000700-1491911889:127906..128097Clytia hemisphaericaexon
TCONS_00028736-exon-sc0000700-1510915933:127906..128097TCONS_00028736-exon-sc0000700-1510915933:127906..128097Clytia hemisphaericaexon
TCONS_00028736-exon-sc0000700-1575043694:127906..128097TCONS_00028736-exon-sc0000700-1575043694:127906..128097Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000700supercontigsc0000700:127906..128097 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00028736 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top