TCONS_00028765 (transcript) - C. hemisphaerica

Overview
NameTCONS_00028765
Unique NameTCONS_00028765
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2267

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00028765 ID=TCONS_00028765|Name=TCONS_00028765|organism=Clytia hemisphaerica|type=transcript|length=2267bp
CAATAAAAGTAAAATTCAACATCATCACAGTAGCAATATTATCAAAGTCA
AGATGGCACCAGTCAAGCCGGAAGAGGCCGAAGTGGAGAGCAACCAATCA
AACAAAAGTTATCAGCATATCATCTCTGAAGCGATAGGAGACATGGGGCG
TTGGCAGGCGTTTTTAATTTTCGCCCATTTTACACCCAAGATTGTTATGG
CGTGGTGTATGATAATTATTAGTTTCGGAGGTGCGAAAACAGATTGGTGG
AAGCGAACAATGGAAATTGACCCTATAACCAATGAAACGTTGTATGTAAA
CCGTTTAAAAGACTGTTCGCCACTCGGCATAAACGATTCTATTGTGTATG
ATAACACGTATACCATAACTGCTGAGTGGGATTTGATATGCGGTTTAGAT
TACATTCCAACTTGGATTAAAACTTCACAAATGGTTGGCGTGATGGTCGG
TGCTGGAGTGCTTGGCCAACTAGGTGACTGGATAGGGCGGCAAAAATGTT
CATGGTTCGCCTTCACTTTAAGTGTAGTTTTCATTCTCATACAAGCCTTC
AGTGCCAACTGGATTATGATGCTGGTCTGCGCTTTCGTTGTCGGAATCGG
TCTCGGAGgtTTCTTGGTATTAAACTCGATCTACGTTTTGGAATACATTG
GAACATCGTGGCGTTCCGCCATTGGTTTTATTCCATTTTGGGCGTCAGGG
GTGGTCATTTTGGGCGGACTTTATTCCTTGTTACCAAATTGGAGACATTT
GTGTATAGCATCAGCTATTACTGGAGCTCCATTTATTATTTTCATGTGGT
TAACACCGGAGAGCATCAGATGGCTTTTACAGCACGGTAAAACAGAGCAA
GCAGTTGAAGTGgtggaaaaaattgcaaaacatAACAAGCGGGCGAAACC
AGATCTCACGGACTTAAAAGCGGTCGCCGATCAAGAAAGTTCAAAATTAA
AAGAGAACGCTCTGAAATACAATTATATGACTTTATTCAAATTCAAAGCT
ACAAGATGGAGATGTCCATTATTTGGCTTTTTCTGGTTCACATGCGCTTA
TTCGTATTATGCATTGACTTTTGGAGTTAGCTTGTTATCAGGTAATCCAG
CAGCTAATATGTCACTAATGGGCGTCGGCGAAGGGTGCAGCTTGATTATG
TGTTGGGCGTTGACTAAAAAATTTGGTCGAAAATACACAACAGTTATCCT
ATTCACGTGCACCGCTCTCTCCTCCTTCGTCATCACTATCGGTTACGCTA
CCAAAGCAGAAGATTCGGAGACGATAAAGACAGTTTGTGCATTGGTATCT
AGGCTATTTCTATCAGGAGCCTGGGGTTCACTTATCATCTACACTGTAGA
AATATTCCCTACAATGTTGAGGTCATCAGCCTACGGTTTCGTTTCGATTT
GCGGCCGAATCGGTGGTATCGTGGCTCCGCAATCCGCTCCACTTTATGAC
GTAGCAAAACATCTGCCTTACACCATCAATGGCGTTTTGGGCGGTCTTTG
CGCCCTAGGTGTCCTGCTTCTCCATGATACGGCTACACAAGATCTGCAAG
ATAAAAtggatgaagatgaagaaggggATCTCAAGAAAGAAGATACGACa
gtgtaaaaaaaatttgtcgaAAATATACCCAGTTGGACATCTTACCTTTG
AAAAGGAGACTCTAAAATCCATCGTAAAACAGACAAAGTTTTTCTCATGA
GGCCCCCCCAAGCGGATTtcgtgatgacgtgatagggGCTTTtttagcgt
gattacgtgatttgggaATTGTTTTTTCGTGATTTCGTGATGAGGTGGAA
ACgtgatttgaaagtttttttgagccgtgatgcgtgatttggagGGATGG
TTGATTgtccatttttttgctgattttcgtaatcgtgattgaagacaaaa
aattgcgtgatatcgtgattaGAGTTACCGCTAGGGGTGCCTCATGTATC
AATCTCGTGTTTCAGTGCCCGAGTAATTTCCACTTCCATGATAGAAATTA
TGCTTTTTGATCATGCCAAAAAATTTACTTTAGCTTTATACTGGGGAAAT
TTctagaaatatttatttttttatcatttcgtCCTCCAAAAACGTAAATG
TTTGAGGAATTTTAtaatctaattttttacaagattttatGTCGTCTAAA
CTCGTGTATCAtgtatattttttaaagatacgattttttacagaaagatt
ttgaagatttttataGAAATAAAATACAGTCGAACACGAACGGGGGAGCA
Aatatgttcgagttaag
Run BLAST on NCBI

transcript from alignment at sc0000703:173202..186285+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00028765 ID=TCONS_00028765|Name=TCONS_00028765|organism=Clytia hemisphaerica|type=transcript|length=13084bp|location=Sequence derived from alignment at sc0000703:173202..186285+ (Clytia hemisphaerica)
CAATAAAAGTAAAATTCAACATCATCACAGTAGCAATATTATCAAAGTAC
GTTCTAGTCTGCAATAAGCAAtatatacacccctgtttcacagccccgaT
GGAGCTTCTTTAAATAGTACAGAGGATTAAGTATCCCTGTTTCACAACCC
CGGTTGAACTTCTTCCAATAGTGGAGcactggggacgaaatttttgctaa
attttccaaTGTGGCGggggtctgtgacacaagggtgtATATATGGTAAG
ATATGGATATATAGCTTTTAGACCTTTTTCGAAAACTTGGgtcaaactta
aattttgattaatCCATCTATCCTTAGGTCAAGATGGCACCAGTCAAGCC
GGAAGAGGCCGAAGTGGAGAGCAACCAATCAAACAAAAGTTATCAGCATA
TCATCTCTGAAGCGATAGGAGACATGGGGCGTTGGCAGGCGTTTTTAATT
TTCGCCCATTTTACACCCAAGATTGTTATGGCGTGGTGTATGATAATTAT
TAGTTTCGGAGGTGCGAAAACAGATTGGTGGAAGCGAACAATGGAAATTG
ACCCTATAAGTAAGTAGTTACGCATGCGTAAGAAATCTCAGATTCATAAT
ATGCATCCTTGCTTTGAAAATTTACCGAGTTACGTAATCTAACTTTTTCT
ACCCAATTCATATGCATCGCTGTAATCATTTTCCGCTCAAGCCTCTTTTC
TTTCGCCGTTCTTTCTAACTTTTGCTTGTACCAGACGACTACATCATTTA
TATACTTTTGAGTCAGTACATTATTTTAGCTCAGGCTGGgtcgttcttaa
tttttgaaatttctaggCTTAAATGACTTTAAcacgcttagtttctttaa
ttaaaaactgaaaatttgttaaaagtaatattttcttagtattttgcgAA
ATCTGAGGCTCATAATGCATTCAAATAGTTCTTAATCTTTGGCAAATATA
ATCAGCCTCGTgctcttatgaaattgttcttataaaaaaagcgtgtagtg
aTAAAGAAACATTGAATGTTTGGATAGAAAGTTTTTACTTAGTTCTTTCA
CCTTACAGCCAATGAAACGTTGTATGTAAACCGTTTAAAAGACTGTTCGC
CACTCGGCATAAACGATTCTATTGTGTATGATAACACGTATACCATAACT
GCTGAGGTAAGCAAATCTGtcttttactttttgacatccctgtctcagtg
acccgccTTTGGATTGTATaaaagcgagtttatgtatttgcacttttgag
tacgggaaagtgactgaagcgattcaAAAAGACCCGCAGTTTTGATCTGC
TAAATCGAgaacggtaaaagtgctgatttactgtagtcctcagctggtca
ggatctggtcaaattagaaccttaccgtctccgtcacagaaaaacagata
tacataaactcgctcTTGTGTACCGtcgtcgttttttataagattctCAT
TCCCGCACTAggattcttgtcacttttccggaACCTTTCCGCTATTTTTT
CCGGGATAAACGGAATGAGATTAGAAAGGGTTTGTTTCtctaaaggtacg
gaaaatcttgtgctAACCCACGAAACTGCCCAACTTTCTGAAGCTCTTTT
TTTAACTGCCCGTAGTTTTTTTCCGatagaaaagtggcaaaggaatctta
tacaaaacgacggtatGATCACACATACTATAACTGCTGAGGTTAAGGTA
ATTTTTATAataattaaatttggcgggaattaaactagcaaactagtctg
ttaattaatcatgtcagagggcacataaaggcggcgggggtttgctagaa
taggagctgcgtaggagaacgagcaaaagttggcgAGAGGATGCTGATTA
AACAGCTTTCAGCCCTtaccgccgacaaaatttcttcctatgcttaccta
actcctacgctcacttttcccgcgtgataccgttccagcccgactggcgt
gccagtctaggCGGGAATTTAAAATTAGGTGGCTGGCGGAAAAATTAAAT
CTAGCGGAAACTTAATTTGGCTAATTTCGGCCAGATCTGCTAaacccacc
aaaatttcttcccttaatcCAAGAAATGtagtaataaaaaaaatctaacc
TTTTTCGTTTTccatttcttattcttttagTGGGATTTGATATGCGGTTT
AGATTACATTCCAACTTGGATTAAAACTTCACAAATGGTTGGCGTGATGG
TCGGTGCTGGAGTGCTTGGCCAACTAGGTAcggatatttttctttctttt
ttaatagATGGTTCAAATCGAAGAAGATGATGTGCGGGATTAAACCTCGT
ATGAAAcactagacgatgttatcacccgctacagtgatagtaaaggcgag
aaaatatggcgttatggcagtaaacggaaaaaaatcggcggaagagtttc
gaagactggcaaactctaccgactgtaaactctttatTTCGGCAAAAAGC
CTTTAggtttttttcttagatagtgatttgtcatagactatagcatagtc
taataAAACCCTAGATCTCGCACTAGATagtcttttaaaaattaaacaat
gaagctcaaaatcgccaaaaattaagaacagtttaaATACAATGCTGACc
taaaattactcaatttcaagcaattcagGGGTCAAAACAGTAACAATTGG
GTATGAAGCCTACAACACCACAATTACAACCTATCAATAAAAACAGGAAa
tgaacaatttgaggctcaaagtgccaaaaaaaaacaGCCGAGAAAAAAGT
GTATCTTTAATTTAGTGACGTCACAATATCAGATGGCGTACTATGTTGCT
TCAACTCCTGTAGTCTGCGAGTATAGACTAGttccatttcattttttcta
tatCTGTGCGAGATGAGAAAAGTTTCAGTGTCATTCTAATCTTTTAATCT
GACAAGCTACTATAACCCAAGACTACtagtttcattttctttctgAACCT
CttaaaataaacacaaatacTACCCTTATTCTGAtcaaaatattcatgat
atgcaccactggagagtcttctgagaacttctAAAATTTTTCACCCAATA
GGTCagttaaacaatagaaaaagtgacgttattgggtggaacaaaaacca
AAACGTTGCATATCTTATAAATAACAAATACTACCCTTATTATGAtcaaa
atattcatgatatgcaccactggagagtcttctgagaacttctaaaattt
ttcacccaatacgtcacttaaacaatagaaaaagtgacgtattgggtgga
acaaaaaccaAAACGTTGCATATCTTATAAATAACAAATACTACCCTTAT
TATGAtcaaaatattcatgatatgcaccactggagagtcttctgagaact
tctaaaatttttcacccaatacgtcacttaaacaatagaaaaagtgacgt
attgggtggaacaaaaaccaAAACGTTGCATATCTTATAAATAACAAATA
CTACCCTTATTATGAtcaaaatattcatgatatgcaccactggagagtct
tctgagaacttctaaaatttttcacccaatacgtcacttaaacaatagaa
aaagtgacgtattgggtggaacaaaaaccaAAACGTTGCATATCTTATAA
ATAACAAATACTACCCTTATTCTAATCAAAATATAATCTATCTCTTCATT
AATTCAGGTGACTGGATAGGGCGGCAAAAATGTTCATGGTTCGCCTTCAC
TTTAAGTGTAGTTTTCATTCTCATACAAGCCTTCAGTGCCAACTGGATTA
TGATGCTGGTCTGCGCTTTCGTTGTCGGAATCGGTCTCGGAGGTAAGTGT
AACccgattttccccgattttGTTTACTATCCAATGGAGATTTTCACTTT
TACTAAGCTACGTAGCCAGattttccctgattttcaaactattcaatgaa
gattttcatttttgataaaagttgaTTTCGGAGGTAAGTGTAGCCCGATT
TTCTCCGATTTTCGAACTATCCAATGGAGATTTTCAGTCGACCATCGACC
TTTTgcggctggcacacaacgtcattTCAACGTTTATGTAATGTTAACAA
CGTCCATATagcgttaaatgaacgttgaaaacaacgttgtgtgccagttg
ggttTTTGAGGATAGAAAATCTAATAGCCTTAAGATTTGCGTAGTATTGT
CAACAATGGATTGAACATGGCTGGAAAGTCGGATAAAATATTTGTATTTC
GAGTCTTTCCCATGCCGTTCTAAATTACAGGCCTGGTGAACGCGCAGCTA
TCTCGTTTTTATGCAGGCCCAAAATTGGGAACTAACGTAGCATATCAAGG
TCAAAAAATGAAACTGTTTCGTGTTTTAGATATCTAGCTGGTTTTATTAG
GGGGAGTTTTGgaggtacttaatttcgcgaattagaTATTGGAATTATCA
AATTTAGCGAAATTTAGAACACCATGGTCTTTCCCAAATTCACAAGATTC
TTTGCAGTAACTTAAAAATCGAAtaaccccagctggcacacagcgttgct
ttaacgttcaaataacgttatttggacgttatgaatgtcaaatggacgtt
gttttgacgttgtgtgccggctgggataGAGTTAACTGtatacaatttca
ttttcaggtTTCTTGGTATTAAACTCGATCTACGTTTTGGAATACATTGG
AACATCGTGGCGTTCCGCCATTGGTTTTATTCCATTTTGGGCGTCAGGGG
TGGTCATTTTGGGCGGACTTTATTCCTTGTTACCAAATTGGAGACATTTG
TGTATAGCATCAGCTATTACTGGAGCTCCATTTATTATTTTCATGTGGTA
AGtttattacacccctgtatcagtgcgACCTTGTCTTTCCATCTAAGATC
TTTGGCTTGTAAATTCCTTCCATGATCCTGAGCAAAACCTCTAAACATTT
TTGTCTAATTCGCAATTATGATAATTTATAATCTCTTAAAAATGTgttct
tacacggttcttacgtcaaaatattattgttttcttgctaaaagtaaaaa
atttgtaaGTTGAAAATCTCGAGCTAGTTGAAAAGGTTTAGAGGTTTAGC
TTAGGACTATATAAAGAATCTACCAGCCAAtgatctcaaaccatctgata
aTCCCTTTGAAAATCTGTATTATCTTAGTAGGATGTGTGCAGGTATTCTA
CTCCATCAGCAAACATTGCAGCTTTGAGTTATAAtcattgagttttaagc
ccgaagggctagaggtgaaactttaacctttctcaggcaagagaaattaa
aGCTACTTTTCTCCCATCAAAAACGCTCAAAGAACAAGCCGTAATCATGA
Cgccggattgtatctagcggttcttttgttttggaggactacattttttg
aaatctagcgatagattttagtttcaatccggcgtttgtgtaaaaactac
gcgcgggcattctggatgggaaataagtggtttcatttccatccaggagt
ctcgcctctagcccttcgggcttgaaactcaatggttataaTGCCCTAGT
CTTAGGGGGTTGGATctgagattttccaaaaaatcctGTCAGGGTCTTTT
GGCTTTCCCCTCAGCTGGGAGGTGGTGTAAATTACTCTCTATAATCCGAA
GATTTTTGATCCCTTGaagattgaattagagagagagtcaaTTGATAGTA
AATTCTCTTTCTCAGGTTAACACCGGAGAGCATCAGATGGCTTTTACAGC
ACGGTAAAACAGAGCAAGCAGTTGAAGTGgtggaaaaaattgcaaaacat
AACAAGCGGGCGAAACCAGATCTCACGGACTTAAAAGCGGTCGCCGATCA
AGAAAGTTCAAAATTAAAAGAGAACGCTCTGAAATACAATTATATGACTT
TATTCAAATTCAAAGCTACAAGATGGAGATGTCCATTATTTGGCTTTTTC
TGGtaagttgaaaatttttgtcagaaaaaaaagttcacaAAGTCTAATAa
acttttggtttgttttgaatttttctctGATCCTTAACCTATAGAGGCCA
TAGAGTGTCGCTGGCATATTGAATGAGCTGTGCTAAGGGAAGGTTTATCT
CTCTCAGCTCGATTTTTTCGGTTCTGTTCCTATAGGGGTGGACCTAGGAG
TGCTGGGACCTATGTCACCCTGTGGCATTTttcacttaagggctctggac
atacccaatttttcgattttataccaacttaaatggcaatttctgtattt
taaaaagattaatgtataactttttttatatgtcctgttagacctacctt
tttagaatttaaaaatcgaaaaattgaaatgaaaaaatcaaatgaagaac
aaaacgaagagtttttcgaaaaagagtatttcacctttcaaagccctaat
ctcggtataaatcaaacattttggaattttttttggttcaggtgatgtat
ctatttaatatctaaaaatacaatttcggaaaatttttgtggaagtatct
ttactttaaaatctccaaaaaacctcatttttggcaattttcttgggatg
tagccaaatagaaaatttttccgaaaaaatccaaataaagaaattatttg
tcattatcttagaaaaagtttgaaacaataaaatgatttccccaaggaga
ttaggcttttttgtgaaaaataaatgtttttttttataagcatacaaaaa
tccgaaaacaggctcagagatgcttaggtcgaaagcttaataaggctgaa
aaatgcttgaggggatgcttaaatctaaagtataaatttaggaaaatact
gaaaatccgtaaaattccagccaaaaaaagccagaatcaggaaaaataca
tttttcttaGGCTCAAGTAATttttgccatatgcttaatttttccccata
tctgagcctagatatgcttataagtgcaatgcttataaaaaaaacatgta
ccacagggataactggcttgtggcagccaagcgttcatagcgacgttgct
ttttgtatatgaatagcgtcgttttgacgttttattaaggtccatgtcac
acttattccttaattactcatgatgtaattacttaaattcattttttcaa
aagcagtttgttcttaaacatgccaaagaagcgaaaacataagattttat
cttcaaattctgaaatttatttctcactatgaccagagcccttaatttgG
ATGCGCGTGcgcatttgaaatcaaaaactgtttgaaaattcaaagttaCG
TTATGACATTTTATGAGTTAAGATTCATTTCCAGAGCTACTTTAAATGAA
AACGATTAAAAGGGACGACAAGTCTTTTTCAAAACACATAAAACTTCTGT
ATcagtatttttaaaaaggaattttactGGTAAATACAGTCTCCAGGCAA
CTCCCCGGACGGTACCCCAAGGAAAGCCGTTTTTCgaattttgatgtatt
tttacgTGCCCAAAAGCTCCCAATGGAAAATGGATGGCAATCAATGAGAA
TACTCCCCTGACAATCAATCTTCTTTTCCTTCTAGGTTCACATGCGCTTA
TTCGTATTATGCATTGACTTTTGGAGTTAGCTTGTTATCAGGTAATCCAG
CAGCTAATATGTCACTAATGGGCGTCGGCGAAGGGTGCAGCTTGATTATG
TGTTGGGCGTTGACTAAAAAGtaagtaaaatttctttttataagaatgag
tAAGGTTTTGGGTAAATTTATAACTAAGGATTGGCTTTAAAGCTTCGCAA
AGTAACCTGAAGACTTCAAAGATGTTTTTCGTGACCCTGCGATCATCTGT
CCTGATTGGCTTTAAAGCTTCGATTGCTTTACTTTAGCCGATCACAGCGC
TCAATATTCATCCAAAATCTGGAAAGCCATCGAAAAGAACCGTCTCCTTT
CGCTTACGGGGCCATGACCTTTAGATCGAATAGCTGTCGTACGGGGAGTA
TTTAAAGGATCTATTACACCTGCTGGACTTTCTTTCCGGTGTGGCGGTAT
ATCCCCTTTTCAAATATAGTTGATACTCTCTGAGTGACGTTCTACAAacc
tagactagcaagcgtctgtctttctttggacacaggaacgcaggaatagt
gcttataaagagttcttataaaaaatagaaattgccgcgggagagttgTG
TGgtttgtattcagtgaacatatagacATAGAGCCCATTGCAAGCTTAAG
CTgtagcgaaatacaacgacgtggtttactagccAAAGCAAACCCTacct
tttgatattaacaaaggaaaaagctagcaaaaagttaaaaacaataAGCC
TCCAGACCAGagttttatacggactatgatgTAATTGAAGCTGAACTTCC
TACTTTCATTCCACTTTAGATTTGGTCGAAAATACACAACAGTTATCCTA
TTCACGTGCACCGCTCTCTCCTCCTTCGTCATCACTATCGGTTACGCTAC
CAAAGCAGAAGATTCGGAGACGATAAAGACAGTTTGTGCATTGGTATCTA
GGCTATTTCTATCAGGAGCCTGGGGTTCACTTATCATCTACACTGTAGAA
ATATTCCCTACAATGTTGAGGTTAGTATAACGAGGGCATTGGTATCTAGG
CTATTTCTATCAGGAGCCTGGGGTTCACTTATCATCTACACTGTAGAAAT
ATTCCCTACAATGTTGAGGTTAGTATAACGAGGGTATTGGTATCTAGGCT
ATTTCTATCAGGAGCTTGGGGTTCACATATCATCTACACTATAGAAATAT
TCCCTACAATGTTGATGTTAGTATAAAGAGGGTATTGGTATCTAGGCTAT
TTCTATCAGGAGCTTGGGGTTCACATATCATCTACACTATAGAAATATTC
CCTACAATGTTGAGGTTAGTATAAAGAGGGTATTGGTATCTAGGCTATTT
CTATCAGGAGATTGGGGTTCACTTATCATCTACACTATAGAAATATTCCC
TACAATGTTGAGGTTAGTATAAAGAGGGTATTGGTATCTAGGCTATTTCT
ATCAGGAGGTTGGGGTTCACTTATCATCTACACTATAGAAATATTCCCTA
CAATGTTAAGGTTAGTATAACGAGGGTATTGGTATCTAGGCTATTTCTAT
CAGGAGCCTGGGGTTCACTTATCATCTACACTATAGAAATATTCCCTACA
ATGTTGAGGTTAGTATAACGAGGGTATTGGTATCTAGGCTATTTCTATCA
GGAGCCTGGGGTTCACTTATCATCTACACTGTAGAAATATTCCCTACAAT
GTTGAGGTTAGTATAAAGAGAGTATTGGTATCTAGGCTATTTCTATCAGG
AGCTTGGGGTTCACTTATCATCTACACTGTAGAAATATTCCCTACAATGT
TGAGGTTAGTATAACGAGGGTATTGGTATCTAGGCTATTTCTATCAGGAG
CCTGGGGTTCACTTATCATCTACACTGTAGAAATATTCCCTACAATGTTG
AGGTTAgtataaagatttttttagtatttaGGCTATCTTTCATACGTTAA
CAAATACCCGTCGGCTGAATTTAAAGCCTCGGAGGACCTAAAGACATAAA
acttttgggtgggaaattaaGCCACTTATTTCAGATCACGAAATATTTAG
GTCAATGAATTTGGTGACTCAGCTGAAATTATTCATCCTAAAACCCAAAT
ATTTCATGATATACTATAATAAGTTAGTACGTTTCAAGACCCATGGCTTT
GGTATTTAGGTTATTTCCATATATACGTTCACGTATACCAGTCGGCTgaa
tcattgagtttaaagcctcgATATAAATTTTGGGTGGGACATTAAGCCAC
TATTTCTCATCCATAACTCACGAACCGCGTGGTTTTAACACAGAAGCCAC
GCCGTATTGGTAGGGGAAACTATCGCCagatttagaaaaatgttcCGTGT
AAAaacgctagattcaatctgtcattccAAAAACAGCGCAAATGTTCACT
TTTTCTTCGTCTGAGAAAGTTTGAAGATTCCACTCTGGCCCATTCGACCA
ATAatccttaaaaataaaaaaatatggcCAGCTCAACACTGAGCCTTCTC
GAAATTTTGCTCTCAACTTACTGGTAAATTCAGTCTCCAGGCAGCTCCCT
GGACGGTAACCCAAGGAATGAGAAGAGCCCTAAAATTTAGACAAAGCGAA
GTTAAAGTGATGCgaaaaataccttatcggggaaaacttcgtcggggaaa
agtgacgaatattttttcccaacgaaaattttccccgacgcagcccgacg
aagttttccccgataaggtagtctaacagtaaaatattttacttttaatt
gTTCAGGTCATCAGCCTACGGTTTCGTTTCGATTTGCGGCCGAATCGGTG
GTATCGTGGCTCCGCAATCCGCTCCACTTTATGACGTAGCAAAACATCTG
CCTTACACCATCAATGGCGTTTTGGGCGGTCTTTGCGCCCTAGGTGTCCT
GCTTCTCCATGATACGGCTACACAAGATCTGCAAGATAAAAtggatgaag
atgaagaagggtaagttttcattgaaaagtctGTTATTTATGTTTGGGAA
ATTGAGGCAATTATATTAAGTTGTCTATAGAAAAGTCTGTTTGATGTGCT
TGAAAAACCGAGGCGAAATGCGTAGTTTCGACACACCTAGTTTCGTAGTT
ACTTTAACTGAGGAATCAAAGaagaaagttttatataatCTGATTGAGGC
agctacactttttttataaaaacgtaCAAAACTTTCGaggccttcgaatg
ttcttaactataactttctgagtttttaaaactaaaaatggTTCTTAATA
TGCTTTTCATGGTTTCTGCCTACTTTTTCAGTCCcccttaaaatgcaatt
ttgcccTTAAAGAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNCAAATATTTTAGTCCccccttttttcttatt
ttgatagattcttgcagcccttgataaagaatccccccttatttaaaaaa
aatgacaaaaatcccCCCTATtttaaaaggcaatttttttgaccccccct
tattttaaggggggggggggcagaaacCATGACTTTTGTGAATATTATTA
CAACTGCCTTAGAAATTCGGTGTTTTGGTGGatagtccgcaaagccttaa
aacgttcttaaaCTTGTGCTTAATACTTAAGCCAtccaagccttatgttc
ttatatagtttgttcttataaaaatattttttttttttgcagggATCTCA
AGAAAGAAGATACGACagtgtaaaaaaaatttgtcgaAAATATACCCAGT
TGGACATCTTACCTTTGAAAAGGAGACTCTAAAATCCATCGTAAAACAGA
CAAAGTTTTTCTCATGAGGCCCCCCCAAGCGGATTtcgtgatgacgtgat
agggGCTTTtttagcgtgattacgtgatttgggaATTGTTTTTTCGTGAT
TTCGTGATGAGGTGGAAACgtgatttgaaagtttttttgagccgtgatgc
gtgatttggagGGATGGTTGATTgtccatttttttgctgattttcgtaat
cgtgattgaagacaaaaaattgcgtgatatcgtgattaGAGTTACCGCTA
GGGGTGCCTCATGTATCAATCTCGTGTTTCAGTGCCCGAGTAATTTCCAC
TTCCATGATAGAAATTATGCTTTTTGATCATGCCAAAAAATTTACTTTAG
CTTTATACTGGGGAAATTTctagaaatatttatttttttatcatttcgtC
CTCCAAAAACGTAAATGTTTGAGGAATTTTAtaatctaattttttacaag
attttatGTCGTCTAAACTCGTGTATCAtgtatattttttaaagatacga
ttttttacagaaagattttgaagatttttataGAAATAAAATACAGTCGA
ACACGAACGGGGGAGCAAatatgttcgagttaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016312XLOC_016312Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028765-exon-sc0000703-1491911889:173202..173247TCONS_00028765-exon-sc0000703-1491911889:173202..173247Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1510915933:173202..173247TCONS_00028765-exon-sc0000703-1510915933:173202..173247Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1575043694:173202..173247TCONS_00028765-exon-sc0000703-1575043694:173202..173247Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1491911889:173529..173760TCONS_00028765-exon-sc0000703-1491911889:173529..173760Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1510915933:173529..173760TCONS_00028765-exon-sc0000703-1510915933:173529..173760Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1575043694:173529..173760TCONS_00028765-exon-sc0000703-1575043694:173529..173760Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1491911889:174260..174357TCONS_00028765-exon-sc0000703-1491911889:174260..174357Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1510915933:174260..174357TCONS_00028765-exon-sc0000703-1510915933:174260..174357Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1575043694:174260..174357TCONS_00028765-exon-sc0000703-1575043694:174260..174357Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1491911889:175332..175428TCONS_00028765-exon-sc0000703-1491911889:175332..175428Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1510915933:175332..175428TCONS_00028765-exon-sc0000703-1510915933:175332..175428Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1575043694:175332..175428TCONS_00028765-exon-sc0000703-1575043694:175332..175428Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1491911889:176859..176993TCONS_00028765-exon-sc0000703-1491911889:176859..176993Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1510915933:176859..176993TCONS_00028765-exon-sc0000703-1510915933:176859..176993Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1575043694:176859..176993TCONS_00028765-exon-sc0000703-1575043694:176859..176993Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1491911889:177809..177998TCONS_00028765-exon-sc0000703-1491911889:177809..177998Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1510915933:177809..177998TCONS_00028765-exon-sc0000703-1510915933:177809..177998Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1575043694:177809..177998TCONS_00028765-exon-sc0000703-1575043694:177809..177998Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1491911889:178867..179103TCONS_00028765-exon-sc0000703-1491911889:178867..179103Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1510915933:178867..179103TCONS_00028765-exon-sc0000703-1510915933:178867..179103Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1575043694:178867..179103TCONS_00028765-exon-sc0000703-1575043694:178867..179103Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1491911889:180687..180821TCONS_00028765-exon-sc0000703-1491911889:180687..180821Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1510915933:180687..180821TCONS_00028765-exon-sc0000703-1510915933:180687..180821Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1575043694:180687..180821TCONS_00028765-exon-sc0000703-1575043694:180687..180821Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1491911889:181521..181721TCONS_00028765-exon-sc0000703-1491911889:181521..181721Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1510915933:181521..181721TCONS_00028765-exon-sc0000703-1510915933:181521..181721Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1575043694:181521..181721TCONS_00028765-exon-sc0000703-1575043694:181521..181721Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1491911889:183458..183661TCONS_00028765-exon-sc0000703-1491911889:183458..183661Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1510915933:183458..183661TCONS_00028765-exon-sc0000703-1510915933:183458..183661Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1575043694:183458..183661TCONS_00028765-exon-sc0000703-1575043694:183458..183661Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1491911889:185594..186285TCONS_00028765-exon-sc0000703-1491911889:185594..186285Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1510915933:185594..186285TCONS_00028765-exon-sc0000703-1510915933:185594..186285Clytia hemisphaericaexon
TCONS_00028765-exon-sc0000703-1575043694:185594..186285TCONS_00028765-exon-sc0000703-1575043694:185594..186285Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000703supercontigsc0000703:173202..186285 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	2.50702	2.15165	1.97469	1.99885	1.0816	1.0555	2.5077	1.90155	2.19536	3.85842	0	0	0.505014	0.000321078	9.6561e-09	0	0	0	0	0	0	4.76897e-08
Blast
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BLAST of TCONS_00028765 vs. Swiss-Prot (Human)
Match: S22AF (Solute carrier family 22 member 15 OS=Homo sapiens GN=SLC22A15 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.152e-31
Identity = 125/468 (26.71%), Postives = 218/468 (46.58%), Query Frame = 2 
Query:  128 EAIGDMGRWQAFLIFA-HFTPKIVMAWCMIIISFGGAKTDWWKRTMEIDP--------ITNETLYVNRLKDCSPLGINDSIVYDNTYT-ITAEWDLICGLDYIPTWIKTSXXXXXXXXXXXXXXXXDWIGRQKCSWFAFTLSVVFILIQAFSANWIMMLVCAXXXXXXXXXXXXXNSIYVLEYIGTSWRSAIGFIP--FWASGVVILGGLYSLLPNWRHLCIASAITGAPFIIFMWLTPESIRWLLQHGKTEQAVEVVEKIAKHNKRAKPDLTDLKAVADQESSKLKENALKYNYMTLFKFKATRWRCPLFGFFWFTCAYSYYALTFGVSLLSGNPAANMSLMGVGEGCSLIMCWALTKK--FGRKYTTVILFTCTALSSFVITIGYATKAEDSETIKTV----CALVSRLFLSGAWGSLIIYTVEIFPTMLRSSAYGFVSICGRIGGIVAPQSAPLYDVAKHLPYTI 1477
            +A+G+MG +Q +L F      ++ +A   I+I+  GA   +     E+ P           +  + + L   +   I+  + + +++T I +EW LI    Y  +   +    GV VG    GQL D  GR+K     F L ++F +   FS ++    V  F+VG+  GG  ++  + + E +GT++ +  G I   F+A G+     L   + +WR L I   + G    +     PES RWL   G+  +A E +  IAK N++ K   +    +    +   +E     +++ LF+++       +  F WF C+  YY LT     L G+  AN++L G+ E  S  +C  L  +  FGRK T         L+  ++   +  + +D+     V     +L+ +L +S A+  + IYT E++PT++R+   G  S+  R+GGI+AP    L  V   LP+ +
Sbjct:    8 QAVGEMGIYQMYLCFLLAVLLQLYVATEAILIALVGATPSYHWDLAELLPNQSHGNQSAGEDQAFGDWLLTANGSEIHKHVHFSSSFTSIASEWFLIANRSYKVSAASSFFFSGVFVGVISFGQLSDRFGRKKVYLTGFALDILFAIANGFSPSYEFFAVTRFLVGMMNGGMSLVAFVLLNECVGTAYWALAGSIGGLFFAVGIAQYALLGYFIRSWRTLAILVNLQGTVVFLLSLFIPESPRWLYSQGRLSEAEEALYLIAKRNRKLKCTFS----LTHPANRSCRETG---SFLDLFRYRVLLGHTLILMFIWFVCSLVYYGLTLSAGDLGGSIYANLALSGLIEIPSYPLCIYLINQKWFGRKRTLSAFLCLGGLACLIVM--FLPEKKDTGVFAVVNSHSLSLLGKLTISAAFNIVYIYTSELYPTVIRNVGLGTCSMFSRVGGIIAPFIPSLKYVQWSLPFIV 466
The following BLAST results are available for this feature:
BLAST of TCONS_00028765 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S22AF2.152e-3126.71Solute carrier family 22 member 15 OS=Homo sapiens... [more]
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