Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029030 ID=TCONS_00029030|Name=TCONS_00029030|organism=Clytia hemisphaerica|type=transcript|length=1166bpRun BLAST on NCBI protein sequence of TCONS_00029030-protein >TCONS_00029030-protein ID=TCONS_00029030-protein|Name=TCONS_00029030-protein|organism=Clytia hemisphaerica|type=polypeptide|length=343bp LGTVGLVDYDTVDLSNLHRQILHTEDKVGLDKVDSAIQYLERLNSSTKLNRun BLAST on NCBI transcript from alignment at sc0000720:159228..167692- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00029030 ID=TCONS_00029030|Name=TCONS_00029030|organism=Clytia hemisphaerica|type=transcript|length=8465bp|location=Sequence derived from alignment at sc0000720:159228..167692- (Clytia hemisphaerica) Coding sequence (CDS) from alignment at sc0000720:159228..167692- >TCONS_00029030 ID=TCONS_00029030|Name=TCONS_00029030|organism=Clytia hemisphaerica|type=CDS|length=11352bp|location=Sequence derived from alignment at sc0000720:159228..167692- (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2 Annotated Terms
The following terms have been associated with this transcript:
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Blast
BLAST of TCONS_00029030 vs. Swiss-Prot (Human)
Match: MOCS3 (Adenylyltransferase and sulfurtransferase MOCS3 OS=Homo sapiens GN=MOCS3 PE=1 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 3.148e-97 Identity = 170/356 (47.75%), Postives = 235/356 (66.01%), Query Frame = 2 Query: 2 LGTVGLVDYDTVDLSNLHRQILHTEDKVGLDKVDSAIQYLERLNSSTKLNAHKKALDSSNAMDIINQYDLVLDCTDNVATRYLLNDACVFAGKPLVSGSALRFEGQLIVYNYMNGPCYRCLYPNPPPPETVTNCSDGGVMGAVTGVIGSLQAMEAIKIITNNLSCFCGKLLLYDAFAGSFRSIKLRGRQSSCLVCSENPQITKLQDYELFCGSKATDKEAPIEILGRDQRITVKEYKKILTED--HLLVDCRPDVEYEICSLQPSINIPLNDIEKK-----KNLEPILXXXXXXXXXXXXX------XRGNESQTAAQLLQKYLDEQSNGHNVKVKDITGGLLAWSNQIDPNFPKY 1030 +G +GLVDYD V++SNL RQ+LH E G K SA L RLNS+ + + +AL + A+D++ +YD+V DC+DNV TRYL+NDACV AG+PLVS SALRFEGQ+ VY+Y GPCYRC++P PPP ETVTNC+DGGV+G VTGV+G LQA+E +KI + G LLL+DA G FRSI+LR R+ C C E P +T L DYE FCGS ATDK +++L ++R++V +YK++L HLL+D RP VE +IC L +++IPL +E++ K L+ + ++ + K GN+SQ A ++LQ L + V+D+ GGL+AW+ +ID FP+Y Sbjct: 106 VGRLGLVDYDVVEMSNLARQVLHGEALAGQAKAFSAAASLRRLNSAVECVPYTQALTPATALDLVRRYDVVADCSDNVPTRYLVNDACVLAGRPLVSASALRFEGQITVYHYDGGPCYRCIFPQPPPAETVTNCADGGVLGVVTGVLGCLQALEVLKIAAGLGPSYSGSLLLFDALRGHFRSIRLRSRRLDCAACGERPTVTDLLDYEAFCGSSATDKCRSLQLLSPEERVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHALHIPLKHLERRDAESLKLLKEAIWEEKQGTQEGAAVPIYVICKLGNDSQKAVKILQS-LSAAQELDPLTVRDVVGGLMAWAAKIDGTFPQY 460 The following BLAST results are available for this feature:
BLAST of TCONS_00029030 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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