TCONS_00029046 (transcript) - C. hemisphaerica

Overview
NameTCONS_00029046
Unique NameTCONS_00029046
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length470

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00029046 ID=TCONS_00029046|Name=TCONS_00029046|organism=Clytia hemisphaerica|type=transcript|length=470bp
GAAAGGTAAAGGTTTTAAAGAATgggaagttttcaaaaaaagagAGGAAA
CGGAAAAATTCAATGTCCTGAAGATCGTAAAAGTATTGAGttATTCGAGG
ATCTTGGCAAGGAACGAGAGATTCTTGATAGCACAgtgaaatgcaaaaat
gaaaaacataaaTGTCAATGGACTGGTTCGTTACGACAACTTGACaCTCA
CTTGAAGAAATGTGATTTCGAGATGAAGAAATGTACTAATGCAAACTGTA
CGAAACTGATTATTCGGAAGAATGTGTCCAAACATGCACTTTACCAATGT
GATCGAAGCATTCGATGTCAATCGTGCTCACTACTTTATTATCGAGCCGA
TCCacttttggtaaattttcatcattattttttttgttgtaGCATAGCCA
AGACGGAAGAGGGGCGCGAAATATATTTCTAGGACATTGTAATCATTTCT
TCATAAtataaaaggaaaat
Run BLAST on NCBI

protein sequence of TCONS_00029046-protein

>TCONS_00029046-protein ID=TCONS_00029046-protein|Name=TCONS_00029046-protein|organism=Clytia hemisphaerica|type=polypeptide|length=136bp
MGSFQKKRGNGKIQCPEDRKSIELFEDLGKEREILDSTVKCKNEKHKCQW
TGSLRQLDTHLKKCDFEMKKCTNANCTKLIIRKNVSKHALYQCDRSIRCQ
SCSLLYYRADPLLVNFHHYFFCCSIAKTEEGREIYF
Run BLAST on NCBI

transcript from alignment at sc0000723:100250..110314+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00029046 ID=TCONS_00029046|Name=TCONS_00029046|organism=Clytia hemisphaerica|type=transcript|length=10065bp|location=Sequence derived from alignment at sc0000723:100250..110314+ (Clytia hemisphaerica)
GAAAGGTAAAGGTTTTAAAGAATgggaagttttcaaaaaaagaggTGAGA GCAAAAGAGGAACTCGAGCATCTTTGAAATGTCTTTATAAGACGTCTTTT CTTATGAGCTCTTATGGAGACCTATTTTTTCAGAtgtaattaatcgaacc aatcgtaTAACTGTACAAATCGTATATGTACGGATAATGGGTCCTAGGAC CTTTtagtatgaaatatatagatagatagatttcagtatttttaatcgaa ctttgtcaaacttaatcgaaccttATTGTCCGATTAGTACTCGACTAAGT TGAGTCGTCCAACTTAAATCAAATACTCGCAAATTCTTTAGAATatgaag ttcgattaaaaaaatagaCCTTAATAACTCTATTAGTTTTATTACATTAA CTCACATAGTTCgcaccccccccctttataaagggggggtaGCGATGTTC AGAAAATCTCAGAAAggggggggtaagagaattttttCTAGAAAGGGGGA AGTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTAGTATGTTTGAAACATTC GATTCAAAATGATTCTATTTTTTTCGCAATGCAGTGtgttctattttctt ttgtttagaattttgaggggggtagcatcaaattttaaaagggggaagaa cctagggtagggggtagctctagggtaaggggggtagtgacccccttccg aactatgACCAGGTGAGTTAAGGAACCATGCAACcctatttcccgatttt cccaCCACTTCCCCTACTTTACTCTCACATATCTgcatatagctcaaaag aagcatATAAATGAGATGGTTACAGAAAGTGCTgggttgaaaatttaaat ttggccgATTTCAAGATATCaaccaaaaactgcctaaacaCATCATAGGA AAGATTCAAAGGAAAGGAGgggacgtcattattgaaaaacggcaATAACT AACTTCAAAtctattaatgcaatcaacaccaaattttgactgcaGACGTC GAATAACAATTCTGAAGTATTTGTTgaagaatttctaaatttttggatga cgtcattttattgTCGGTAATAATTGAAATATATatacgtcaaaaaatga tgatgtttttttttcatgaaatatttcagaattaataatcaatgttttca ttcaaaaaaatgttgTCGAACTTTGTGGAAGGGAACTTATTCGTCGAATT TGTTGTACTATCTAACATTTTTTTGTCGTCAAACTTTAACTACAAACTTT GTCTAACGGAGTTTTTTGCTgaatttgtcaaacatttcttgTTGTCGCAC TTGTTGGAACTTTGTCAAAGTTAATATGTTTTGTTGAACTTAATCCAATA CTCccaatttcagtgaaaaatttgattaaataaTTTAATCAGACTGTtgt cgttcgattaagtttgacaaagttcgattcGTTCAGTAATCAAACTGTTC AATTAATTACATCTGGATTTTTAGAAGTGCTCTTTAACCTGCCTCCCCTC TTGATGGCATGATTAAGAATGAGTCTTTTGGATTTATGAATGTTTATTTC AAATGGTTATGGTCAAATTGTtacgtttttgccaaaatagtaaaaaaaaa tggcCCAGACGTTTTTTGATGGTCTTTGCCCTGGTTTTTCAGCACTGGGA AAAGGTTTATTCTAGGTATTCTAGGGCTTCCTCTGACATGTCAAACAAAg atgtgtgatttgaaatgtttttcttgTGGAAAAAAATAATGTATTTGCTA AGATTTCAATtagatttcaattatttttggtaattttggttaattcttcT TATATTTGACAATGTCTGTGCAGAACCACTTGCCCTCCAAAAATTTgcta aaaaagtctgaaaatcctttttaagaagtctgctagccaaaattgatatt tttaaattttgcctgtaatgtGCTGGCTGGGCATACCCCAAACTCCAACC ATGAcagccaaaaattgaaaaataaaaattttggctaatagacttttttt aacgaattttcaaacgttttcgtaatgatattttatgttcactggagggt cttctttccaaaaacctgatatatttattttcagatataagttgtgacct ttttctttatcagtttttcatgttctttcgaatagaacaaatttttcaat tttgacaactttttactttggttacgtcagtttccatggcaacgggtgCC TCACTGCCTCacctttcaaattttgatattttacatTCAAGTATataaca atattcaatcataaaatccctatGCTCAAGCTGCTGCATACGGGAAGACA CAGGCCTCTACTATCAGGCCAAAAGCTGCAGATaaaaggttctctaaaaa gtggctgagtgatttttttccaatcttAATGGCCTTGTAATCTGTTGTAA TATGCATTTTTGCTTTTCAGGGAAATACCCTATCNAAATGATAGTTATAA caattttctacaagatcttcatttttttcttcttcattttcatcttcatt tttaaaatttttttaaagattttttttattttaaattgttccactcacta atatctttccaatgataccaaatctataaagattaaagtattccttcaaa agttataggtaaaagaaaaaagagtgcacacttattgtGAATATACTTTA GTCAGTATATTTTCCTTCTATTGTATTGCAGAACACCTCTCCCAATTCTA ACAGCCTTATTCTCACTCCTTGACAAGATGACCTGTAAAAAAGATCCAAC ACTGTTTCATTGTTTCTATCGTTTTTCAATATATATATTGTTTCTatcga aatttgaaatttaaattacagattgaaaattgaaacatttaaaTTATAGG TCTCCAATAATGGTGGATGCGTGATATCCAGTTTTTGAATATCAAAACTC AAATTATTTTGGATTACCGTATTCCATCTAAAGCATATTAAGCCCCCCTC caaaaaaaaatgtacaaagggTTAAGATTGGATAAATGGTCAGAACGATT TTATACCAGCTTGTACCTGTAAAGGTACAACTATACCAACTCATGTCCAT GTTTGAGGGAGTAGCCTCATATTAGGTTATAATAATAGCCGTACAAGTTT TTCTCTGTATCGTTGTGATTTTCCTTGGTGATTTTAGCTTGTCATATATA TTTTTCTGgtcttttttttacctttttcataCCTTTCTCAGTCTTTAACT ATTCTCATTTCTTGATCAAGACACCCTGAATAGTGTCCAGCAAAATAAAA CATGGACAAAAAACAATAGAGAAGTGATAGCATTCCTTNTTTCTGATTTT GTTTTACATAAGCTGCTAGGCTTATGACATAGGAAAGCAGACTGATCGAT GTTCCAAAAACAGACATGAGAAACTGGGCCTTTGTTAGATTTTGGTGCCA ATGGGNCGAGTGATTGATATAATTACAGAAATTTAATAAtcaattttggt aaaattaagaTAGTTTTTTACAGAATTGTTTCGTTCTCAATCATTCAATC AGCAAATTAACTAAAGGTTAAATTTAAGGGCATCAGTCGAACTAACTAAA GGTTAAATTTAAGGGCATCAATCGAACTAATTAAAGGGTAAATTTAAGGC CACCAGCCGGGATGTTTGTTGGACAAAAACTCGATTTTAAATTGATTAAC AAGTATACAGTAGTTATAGTTTTCAACCTAATTATATAGTATATATATAT TTAAGCCTATTACTTATACCATCTTCCAATAGATTATATGCACAGTTAAT TGAAAAGNGTCTAGTTTATTGTCGTTCAGAATGTCACACATACAATTTGA ATAATATTTTATCTCTTTCATTGACTGGACAATTGAATTGCTGCAAAGTC CAGAATCAGTTATTCTAGTGGATGTCAACCCATACAGATCCGAATAATGA AATCTCCCAGTTGTAACAACTAGTTTTACTTTAGATGGCGTtgacaagaa cattttaatttcTGATTCGTTTAATGATACTTTGTAAACAAGGGAAGAAT CATTATTATAGATTGgtgttttattttggaaaacaCTCAAATAATTATTG ATAGGATAATTGTTCTTCTGCTCGATTACATAGGCCATAGAATTACATGT ACCACCACAACTTCTGCTGTATTGAACTGTTGGTACTCTTTNAATACTGG AAAAGTAACATAAAAGTGCAGGTATGAAATAAAGATAAACTTGTGATTCT TCTTTCCCTATCCAGCATGTTTCAATGCCATATTGAAAATCGATAATATT GNGGATAATTGTTCTTCTGCTCGATTACATAGGCCATAGAATTACAAGTA CCACCACAACTTCTGCTGTATTGAACTGTTGGTACTCTTTTTGGGACACA CCTTCCATCAATCAAGTCATATCCATCAGCGCATTTCACNGTATTCGTCA AAAATAATGATACTTGCTATGAGACTTGTTGTTAAACACAAACAAAATAG TAATCGATTTCTTGCtttgctttttatttctttttctgaCGATACCTCAA TTTTAAATGAAGACAGAGACTTTGTAATACTGAATCCCATATACATGGTC CACAAGCAAACATTGAGCAAACTCCAATGCAGTCCTAAACCAAGCCATTT GCACGCTGAAGTTTGCAAATCCACCAGAACTGATGCCAAGAAAATCATAT CTGAAGCTAGTNGATGCTCCTCGGTACATGTTTTCACTACAAACACGACA AAACAGATTTTTGAAGTAGTAACCATACGCTGTCGTTAAATTGGCAAAAA AGTGATGACAGAACATTGCCAGGGTTCTATCACATTTTTCAGTGTTACAA TTCATGTTGTATTGTCGACCTNGAGCAACCAAATCAAGGTATTGGTGTTT ACAAGACCTGAGGTTGATCTGGTCTGATTTTGTTTTACATAAGCTGCTAG GCTTATGACATAGGAAAGCAGACTGATCGATGTTCCAAAAACAGACATGA GAAACTGGGCCTTTGTTAGATTTTGGNcattttgacattttgtaaCAGTT TGTCTGTATATCTTTCCAAAGGTATTGGATTTTCATAATCCCATAGATAG TCAATACAACAATTACCATCTACTGGACATTGCTNTTCAGGAACATTAAA TGCATCGCACGTGTAGTTAAATGCAACGTCTTTAAAAGTGGAAATATTGT AACATTTGGCACAAAACTTATTTCTGTACGCATAACCATCTGCCCCAATG ACCGGCATGGTAAGATCACCATCATTAATGGTGAACTCGTTTCCCTGGCA TTTAGAGATTAGCCAAATGTCTTTACTTTCCTTTGGGCATCTATCAACTA GAATTAAATCAACACGGTGTATAAGCGTGTAGCATGATAGTTGTCTTTTG ACATTTTCTAACAGTTTGTCTGTATATCTTTCCAAAGGTATTGGATTTTC ATAATCCCATAGATAGTCAATACAACAATTACCATCTACTGGACATTGCT TGATATCACAGCTACATTGTTTTGATGACACGTCACAAAGGTTTCCTAAG AAAGGTTCAATATTTATGTTAAGGGTTTTTTTCCATAATGTTTTGACGAA CTCTTCTAGAGGGAACACATGATTTGTACCAGAAACAAAATCAATGTGTA AACCCAAAAGTATTAGTGTAAGACCTGTCAAAAACATAGTGTCGAGCTCT GAAGTTGAGAATGTTAAAATATTCATAACTTTTATAGGTAATTACTGAAA GAGATTTAGATCTTAAATCGTTCCTCGGGCTAAGCCTTGTTGTTCTGATT TGTGGTGGCGTTCTAAGAATTCAgaaaatcgataaaataaaGCATCTATA ACGAACCCTAAATTGAAAAACCCTGAATCTTGATCTTCTTCATTGATTTA CTAGAAAAAAGCAGGAAGCAAGTAATTACAAGAGAAAGCTTTTTATCTTC TTGTTATTATTACCTTCAGCCCACCACGGAAATCTCATTAGAAGGTTAAT CTTACCTTTGTTATTATTACCTTTAGCCCACCACAATATCTCATTAGAAG GTTAATCTTACCTTCGTTATTATTACCTTTAGCCCACCACGAAAATCTCA TTAGTAGGTTAATCTTACCTTTTTTATTATTCACAAAAATCTCATTAGAA GGTTAAAAATCTTACCTTTGTTATTATTACCTTTAGCCAACCACGAANAA TGCTCCTCGGTACATGTTTTCACTACAAACACGACAAAACAGATTTTTGA AATAGTAACCATACTCTGTCGTTAAATTGGCAAAAAAGTGATGACAGAAC ATTGCCAGGGTTCTATCACATTTTTCAGTGTTACAATTCATGTTGTATTG TCGACCTAACGATAAATTAATGTTACACCTTTGACCATTTTTGATGATGT GCTCAACATAGTCTATTGAAACGTTGCTAATATCAATACTGTCAGNCTAA CTGTAATTAGAATAAAAGGGACTCACTTCAATGGAAGATCTGGGCTAATT CCTCTTATAGTATCTTCAAATCCAAAGTAGAAAGAAACCTTCAAACCTCT TGTTCATTGGAATGATGGAAACGTACAATGTTTTGAAGACCGAAAGAAAG TTAAGGTTTCTTATCTTTTGCTGATAGGAAGGATGCTAATTAGggttgga tcacgagatttacgtttggcgtgatccaagccacgataaaccaatatgaa tatcactgggtcgataaacTTAAACTTATTTAGATAATAATTAGGGTTGT TTCTTTCTGATTAACCCCCTTGAAATGGTTCGTTATACACTGTTAAAAAA TACTACATAATTTGAATGATGatgttttgtaattttaaaCCTTTTGAACC ATGAATTCACAAATCACTTAAAAAATATATGTATAGgtattaactttttt taaatatcctcTTTGAGAATGTCATACTTTCTTAATCTTTTGATGAGCCG TATTCGTATTCGCTACCCATTCCGCTCAAATGTCTTAAGATATATCTTTT AAATTGAgtctacaatcagtgccgaaatatattggcaattttgggtattt taacgttttcagAATTTGTATATTATATTTTACAGCAATAGAATTCTTGC ACCACTCTTCGGATTGCACATTTGTttaatttcaaagataaaatACCTTT AAGGTTTCGTGCTTGGATTGTGTATGGAATACATTGTACAAATTGCAATT CCTTTTACGTGGGTAAGNTGATTGTGTATGGAATGTATTGCACAAAATTG CAATTCCTTTTACGTGGATAAGACCAAAAGACATGTCGCCACCAGATATA AAGAACATTGCAACCCCGAGAAACCCTCTGCGGTTACAACTCACATAATG actgaaaatcatgatttttccATAGAAAGAATGAAAGTTTTACATAATAG TAATTATCGGCTCGATGAAGAGCTTTATATAAAAGAAACGCTGATCATAA GTGAGCTCAAACCGGACTTGAATGAGCACGTCTCTTCATTCCCCCNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNAGCTCTTTTAAGATGTATGCGTTCCTTTGTGAAATTTAACAACTTG TAGTAAttatgaataaaattaaatttctagttttcactttttttatcaaa tagaatttcataatttttatatttttttatcttgtAAATACTGTAACATT GTGTTAAAAGCGAAAAAACGTGTTTGATCTTATAGTAATTCATGATTCCA GTAGGCCATATTTCTTCCTTATGCTTtattcaatgttttcttttctacCT TTTCAATAGATCAACTATTAGACAATTCAAAATGCCAACAGTTTTCGTTG GTTTCAATACAATTACACATCTTCCATCTCCACCAGATGACCCTTCCACA GATGAACGTGGTGAATACGATGTAAAATTTGTTTACGGTGAACCGAGTCA TTCGACATGTTGTATTTGTTTATCCATTCTGAGAAATCCGATGCAAGGTC GTGAATGTGGACATTCTGTAAATCATGTGTTACTCAGTTGACCAAATTCT GAGATTAACATATTATTtgtgaaaaaaacaaccttgtcttttttgctaaa atacATTTCGCTTTTAATTGACATATTAGTGACATATGGATGAGGAATTT TATCAGTTTATTATCTTACACTGGGAGCCGATCGCAACTTTTGCAGAAAT GTGtacagttttttataagaaccagcaaatttttgttgaggctctGCTGT TCTTTTTTAACACCTTTAGCCtcgaattgttcttatcctgttctaattat tttgggaaaattcaGGTTATTCCTGGTTCAATACGCTATTTCGACCTTTT ATAACCCTTAACTTGCCCAGGATTCAATCATTCAAGGTTGCTGATGGTTG TTCTTAGATTGTTCCCATTTTACGGTATTTTAGAggctcattgttcttat aaaattgttccgataaaaaagagtgtatgcaAAATTGGTCCCTCTTCAAA AGAAGGATAGACTAATACTAATAATTTTTGCTTTGTTACAGAGGAAACGG AAAAATTCAATGTCCTGAAGATCGTAAAAGTATTGAGGTTAGTTTGATGT TGATTTATGTTAGAATTGTTCAAGCATGATAGTACAAAATTATTCCTAAA ATTCGAATTATTCTGGAAATATTTTCATGCCCATTCGTCTTTTCATACAA CAAACGATTTGATATCCACAATATTTTCTATATTGCAAATAATGtgattt tttgacaattttcatcggtaaaatcaattctttttaaccatttcatattt tcatctttagttATTCGAGGATCTTGGCAAGGAACGAGAGATTCTTGATA GCACAgtgaaatgcaaaaatgaaaaacataaaTGTCAATGGACTGGTTCG TTACGACAACTTGACGTGAGCATTATAGAAGGGCTAAAAGGgatatttat taatttttaattttcagattgCTTGAATGAGACATGAAACTGtcagtatt gaaaaaataattttcattgctTCAACTATGATAATTTTCAAATATATGTT ACAGGTTATTCTGAGAAGAGCACTCActtactattttgaaaatagttttt atCCCTTTAATGAATTGGTTTTCCCTGAAAGTTTTTTAATCTAGGGACAC TGGGTGTCTATTCaaacttgaaaatgaaccatTACTTCCAATCTTGAGGA CCTTGAAAAGAATCTTCCTAGCATGTGTTTGTCTTGCATAGACTGGGGTT TTCACAGATTTGTGACTGTGTTTTACCTACAGATTTTTTCGAGCTCACTT CACTTGCAAtaacatttattttgttttttgttgtttgtagaCTCACTTGA AGAAATGTGATTTCGAGATGAAGAAATGTACTAATGCAAACTGTACGAAA CTGATTATTCGGAAGAATGTGTCCAAACATGCACTTTACCAATGTGATCG AAGCATTCGATGTCAATCGTGCTCACTACTTTATTATCGAGCCGATCCac ttttggtaaattttcatcattattttttttgttgtaGCATAGCCAAGACG GAAGAGGGGCGCGAAATATATTTCTAGGACATTGTAATCATTTCTTCATA Atataaaaggaaaat

Coding sequence (CDS) from alignment at sc0000723:100250..110314+

>TCONS_00029046 ID=TCONS_00029046|Name=TCONS_00029046|organism=Clytia hemisphaerica|type=CDS|length=1644bp|location=Sequence derived from alignment at sc0000723:100250..110314+ (Clytia hemisphaerica)
ATgggaagttttcaaaaaaagagAGGAAACGGAAAAATTCAATGTCCTGA
AGATCGTAAAAGTATTGAGttATTCGAGGATCTTGGCAAGGAACGAGAGA
TTCTTGATAGCACAgtgaaatgcaaaaatgaaaaacataaaTGTCAATGG
ACTGGTTCGTTACGACAACTTGACaCTCACTTGAAGAAATGTGATTTCGA
GATGAAGAAATGTACTAATGCAAACTGTACGAAACTGATTATTCGGAAGA
ATGTGTCCAAACATGCACTTTACCAATGTGATCGAAGCATTCGATGTCAA
TCGTGCTCACTACTTTATTATCGAGCCGATCCacttttggtaaattttca
tcattattttttttgttgtaGCATAGCCAAGACGGAAGAGGGGCGCGAAA
TATATTTCTAGATgggaagttttcaaaaaaagagAGGAAACGGAAAAATT
CAATGTCCTGAAGATCGTAAAAGTATTGAGttATTCGAGGATCTTGGCAA
GGAACGAGAGATTCTTGATAGCACAgtgaaatgcaaaaatgaaaaacata
aaTGTCAATGGACTGGTTCGTTACGACAACTTGACaCTCACTTGAAGAAA
TGTGATTTCGAGATGAAGAAATGTACTAATGCAAACTGTACGAAACTGAT
TATTCGGAAGAATGTGTCCAAACATGCACTTTACCAATGTGATCGAAGCA
TTCGATGTCAATCGTGCTCACTACTTTATTATCGAGCCGATCCacttttg
gtaaattttcatcattattttttttgttgtaGCATAGCCAAGACGGAAGA
GGGGCGCGAAATATATTTCTAGATgggaagttttcaaaaaaagagAGGAA
ACGGAAAAATTCAATGTCCTGAAGATCGTAAAAGTATTGAGttATTCGAG
GATCTTGGCAAGGAACGAGAGATTCTTGATAGCACAgtgaaatgcaaaaa
tgaaaaacataaaTGTCAATGGACTGGTTCGTTACGACAACTTGACaCTC
ACTTGAAGAAATGTGATTTCGAGATGAAGAAATGTACTAATGCAAACTGT
ACGAAACTGATTATTCGGAAGAATGTGTCCAAACATGCACTTTACCAATG
TGATCGAAGCATTCGATGTCAATCGTGCTCACTACTTTATTATCGAGCCG
ATCCacttttggtaaattttcatcattattttttttgttgtaGCATAGCC
AAGACGGAAGAGGGGCGCGAAATATATTTCTAGATgggaagttttcaaaa
aaagagAGGAAACGGAAAAATTCAATGTCCTGAAGATCGTAAAAGTATTG
AGttATTCGAGGATCTTGGCAAGGAACGAGAGATTCTTGATAGCACAgtg
aaatgcaaaaatgaaaaacataaaTGTCAATGGACTGGTTCGTTACGACA
ACTTGACaCTCACTTGAAGAAATGTGATTTCGAGATGAAGAAATGTACTA
ATGCAAACTGTACGAAACTGATTATTCGGAAGAATGTGTCCAAACATGCA
CTTTACCAATGTGATCGAAGCATTCGATGTCAATCGTGCTCACTACTTTA
TTATCGAGCCGATCCacttttggtaaattttcatcattattttttttgtt
gtaGCATAGCCAAGACGGAAGAGGGGCGCGAAATATATTTCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016517XLOC_016517Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029046-exon-sc0000723-1491911889:100250..100293TCONS_00029046-exon-sc0000723-1491911889:100250..100293Clytia hemisphaericaexon
TCONS_00029046-exon-sc0000723-1510915933:100250..100293TCONS_00029046-exon-sc0000723-1510915933:100250..100293Clytia hemisphaericaexon
TCONS_00029046-exon-sc0000723-1575043694:100250..100293TCONS_00029046-exon-sc0000723-1575043694:100250..100293Clytia hemisphaericaexon
TCONS_00029046-exon-sc0000723-1491911889:109241..109286TCONS_00029046-exon-sc0000723-1491911889:109241..109286Clytia hemisphaericaexon
TCONS_00029046-exon-sc0000723-1510915933:109241..109286TCONS_00029046-exon-sc0000723-1510915933:109241..109286Clytia hemisphaericaexon
TCONS_00029046-exon-sc0000723-1575043694:109241..109286TCONS_00029046-exon-sc0000723-1575043694:109241..109286Clytia hemisphaericaexon
TCONS_00029046-exon-sc0000723-1491911889:109510..109614TCONS_00029046-exon-sc0000723-1491911889:109510..109614Clytia hemisphaericaexon
TCONS_00029046-exon-sc0000723-1510915933:109510..109614TCONS_00029046-exon-sc0000723-1510915933:109510..109614Clytia hemisphaericaexon
TCONS_00029046-exon-sc0000723-1575043694:109510..109614TCONS_00029046-exon-sc0000723-1575043694:109510..109614Clytia hemisphaericaexon
TCONS_00029046-exon-sc0000723-1491911889:110040..110314TCONS_00029046-exon-sc0000723-1491911889:110040..110314Clytia hemisphaericaexon
TCONS_00029046-exon-sc0000723-1510915933:110040..110314TCONS_00029046-exon-sc0000723-1510915933:110040..110314Clytia hemisphaericaexon
TCONS_00029046-exon-sc0000723-1575043694:110040..110314TCONS_00029046-exon-sc0000723-1575043694:110040..110314Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029046-proteinTCONS_00029046-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000723supercontigsc0000723:100250..110314 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.9134 11.7972 4.3094 0.75287 0.733237 0.724267 1.39808 3.10855 2.29091 1.41883 1.65258 1.08634 1.44644 2.34711 1.54371 1.65664 1.53063 2.0918 0.577987 0.756027 2.1028 1.73082 5.92248 4.67592 1.89725 1.3025 0.186387 0.198917 2.26308 1.84457
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR008974TRAF-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00029046 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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