TCONS_00029051 (transcript) - C. hemisphaerica

Overview
NameTCONS_00029051
Unique NameTCONS_00029051
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1374

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00029051 ID=TCONS_00029051|Name=TCONS_00029051|organism=Clytia hemisphaerica|type=transcript|length=1374bp
AACACAGGGAAGACATATTGTCAGCGGTGATCCTTAACAACAGTTTCGAC
GGCCTCTGTCAGTATTGCAAATTCGAGAAAATTGCTGTGAAATGTGACAC
CTGCTTCTGGAAAAAGCTGTGCATCAAATGTGATGAAAAATTACATGTGG
AATACCCCATGCACAACCGTATTGGTATTTTTGATGGTTTCAAAAGAACG
CTATCCCCATCTGAAACAGTCGATGAAGAAAGTGTCATTATTGACAAGTA
TCCAACGATACCACTGATGCCCATTAATTGTCAATCATGCGATAGCTATA
ATGTTGAGAGAATTTCTGGTGATTGTGTTGCTGTTGTTACTATAGCAGGC
AAGTATTATCTTCACCTATATTCGTTGAGATGTAAAGATTGTGATTCAAC
CTCAAACCCTTTTACCTTGGAAAATGTGGTTGGGTCTGGATTTTGGCCAA
GTGCACCGACCAAATTCAGCTACCTCTTTCATGTAGAAACACTTCAATTT
TGGGACACACTCCGGAAAAACGCGCCTGGAACATCGGAAGCTGCTTTTCT
AGAAGTATTGAATACGATGACGAACCTACATGGAAGGAAAACAGGGAAAA
TTACTCCAGCTATTTTCTCTATGGCATTCAAGGAATGGTGCTTTTGTCAA
CATAAAATACACATACTTCAGAAAAAGAAGTGGATAGAGTGTCCATCTTG
CACTCACGTCCAACACTCTTGTCATGTCGATGGAAATTGTAAACTCTATC
GTTATCGGAGTTCAGGGAGACGTACAAGGCCAGAGTTTTACAATGGTTTA
TTCATTGCTGAAGATACGAAAGTAAAATGTTTCATTGACGAAATATACAA
AGGAAAATTCGGAAAGGGAGAAGCCGATTTTATTTGTGGTGGAAAATGGA
ATGCTGCCCGAAACAAAGCGAGTACCAAAAAATCATTGGATGTTACTGGA
TTGGAAGTTATGTCTTGTCGTCATCAACTTGGGCAAAGGGCTCTTAATAA
GTATCGAGGAGAGATTTACGGTTACCCATTGTACCTCATCAGGGAACACC
TTTCAAcgagaaacatgaaatttgtgTACGCGGACATCATGTGCAAACTT
AGCAAGTTTATCAAGCGTGTCGATGCGGAAACTGCAAACAAATTTACTGG
GGCTTTGTCTGTTATGCATGCAAAAGGTCATGGTATAGATTGTCAgTTCA
TATGGGATGGGAAGTGGATTGACGGTACTGGTCGTTCAACTGGCGAAGAG
ACGGAACAAATTTTCAGCTATATGTCAAGATTTTGCAATacaacaaaata
tcaaaaacctgAGAGTAAAacttagatttaaatttttacatcTAACATAA
TCTTCAaaatgattgattgataac
Run BLAST on NCBI

protein sequence of TCONS_00029051-protein

>TCONS_00029051-protein ID=TCONS_00029051-protein|Name=TCONS_00029051-protein|organism=Clytia hemisphaerica|type=polypeptide|length=440bp
HREDILSAVILNNSFDGLCQYCKFEKIAVKCDTCFWKKLCIKCDEKLHVE
YPMHNRIGIFDGFKRTLSPSETVDEESVIIDKYPTIPLMPINCQSCDSYN
VERISGDCVAVVTIAGKYYLHLYSLRCKDCDSTSNPFTLENVVGSGFWPS
APTKFSYLFHVETLQFWDTLRKNAPGTSEAAFLEVLNTMTNLHGRKTGKI
TPAIFSMAFKEWCFCQHKIHILQKKKWIECPSCTHVQHSCHVDGNCKLYR
YRSSGRRTRPEFYNGLFIAEDTKVKCFIDEIYKGKFGKGEADFICGGKWN
AARNKASTKKSLDVTGLEVMSCRHQLGQRALNKYRGEIYGYPLYLIREHL
STRNMKFVYADIMCKLSKFIKRVDAETANKFTGALSVMHAKGHGIDCQFI
WDGKWIDGTGRSTGEETEQIFSYMSRFCNTTKYQKPESKT
Run BLAST on NCBI

transcript from alignment at sc0000723:166353..168984+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00029051 ID=TCONS_00029051|Name=TCONS_00029051|organism=Clytia hemisphaerica|type=transcript|length=2632bp|location=Sequence derived from alignment at sc0000723:166353..168984+ (Clytia hemisphaerica)
AACACAGGGAAGACATATTGTCAGCGGTGATCCTTAACAACAGTTTCGAC GGCCTCTGTCAGTATTGCAAATTCGAGAAAATTGCTGTGAAATGTGACAC CTGCTTCTGGAAAAAGCTGTGCATCAAATGTGATGAAAAATTACATGTGG AATACCCCATGCACAACCGTATTGGTATTTTTGATGGTTTCAAAAGAACG CTATCCCCATCTGAAACAGTCGATGAAGAAAGTGTCATTATTGACAAGTG TAGGGATTCTAATTCAATATTATTTGATAAAAGTCTCAGATTTCAAAGTT AATGTAACTACAAATTAATTTTATTTTAATATCAATTAGAATTTTTTCGC TTCTTAAATAATAGTCTGAAATAGTTTGAAAAGAGCAGACCTTGGAGGGA CAAAAACTGACCCTAAGAGAGACTGAAATCAAGGAAAATAGAATTTTCAT GAATTCTATTGCCTTGATTGGGAATATTGTTATTTGAATGTTAGTTTTTT CAGGCTCACGAAATGAGACTTTATCTTATTTTACAATCCTTAAGAGGATT CTTGGATTTTGTGATTTGTACCTTTTAGTGGGATTTTGTAGATCCAAAAA AGGATCCTTTTGCTTAGGTACCTCTCGGAAGTTTGTCTCAGATCAATATT CCAACAattatgtattttttataacAGATCCAACGATACCACTGATGCCC ATTAATTGTCAATCATGCGATAGCTATAATGTTGAGAGAATTTCTGGTGA TTGTGTTGCTGTTGTTACTATAGCAGGTAAAGTGTTTTAGTGAAGGTTAA AGCTAAGAGCATTTAAAATACTAGAAACAGCTTCTTGCTCTTTCTTAACA TTCTATTATTTACCATCATGACGctgaattgttttattttgtgatAAAAC AATGATATGCActgtaataaaaatattttgaaaaatacaaaaatcttgTA ACATAACATATATTTTAGGCAAGTATTATCTTCACCTATATTCGTTGAGA TGTAAAGATTGTGATTCAACCTCAAACCCTTTTACCTTGGAAAATGTGGT TGGGTCTGGATTTTGGCCAAGTGCACCGACCAAATTCAGCTACCTCTTTC ATGTAGAAACACTTCAATTTTGGGACACACTCCGGAAAAACGCGCCTGGA ACATCGGAAGCTGCTTTTCTAGAAGTATTGAATACGATGACGAACCTACA TGGAAGGGTATttcacttcttttttttaatttgttaattTGGATAAAATT GAATCTATACAATGTTAGCGACATTTGTTGGCtgtatgaaaatgaaagtt gatATTTCACCCTTAAAATAGAATGtcaattaatttgttgttttttctct aTAGAAAACAGGGAAAATTACTCCAGCTATTTTCTCTATGGCATTCAAGG AATGGTGCTTTTGTCAACATAAAATACACATACTTCAGAAAAAGAAGTGG ATAGAGTGTCCATCTTGCACTCACGTCCAACACTCTTGTCATGTCGATGG AAATTGTAAACTCTATCGTTATCGGAGTTCAGGGAGGTTTGAATGAACAT TAATTAACTTTATTTCAATAATGGCCATTATCGAAACTTTTTTTAATCTA TAAAACTAAAAAcgtattttttaaagaacaacgattcgacaaattaaaaa attttaatggtttttaATCTCACCCTTTTTAGACGTACAAGGCCAGAGTT TTACAATGGTTTATTCATTGCTGAAGATACGAAAGTAAAATGTTTCATTG ACGAAATATACAAAGGAAAATTCGGAAAGGTTTGGATATTAAGGATACTA TTCTAAaccgatttttgtttattttgcaaatttagaCAACATTTGCCAAA ATTTGTTCTCGCCAGCCAAATAAGTctcaaaatagaaaattctCAGGATT TATACCACTTTGACAAATAAGTTCTCGGCAAAATAAGTTCCCTACctaat tttaatttaaatttaaatgccttacattttaattattttttactcAGGGA GAAGCCGATTTTATTTGTGGTGGAAAATGGAATGCTGCCCGAAACAAAGC GAGTACCAAAAAATCATTGGATGTTACTGGATTGGAAGTTATGTCTTGTC GTCATCAACTTGGGCAAAGGGCTCTTAATAAGTATCGAGGAGAGATTTAC GGTTACCCATTGTACCTCATCAGGGAACACCTTTCAAcgagaaacatgaa atttgtgTACGCGGACATCATGTGCAAACTTAGCAAGTTTATCAAGCGTG TCGATGCGGAAACTGCAAACAAATTTACTGGGGCTTTGTCTGTTATGCAT GCAAAAGGTCATGGTATAGATTGTCAggtattatatattattttaataGT TGTTAACTTTTGGtgattgatttgttttttttaactttggaaatTCTTTT CAACACATTCAAATTGAAATGTAATTTTGCATCTTATGAATAATTACTCT TCAGTTCATATGGGATGGGAAGTGGATTGACGGTACTGGTCGTTCAACTG GCGAAGAGACGGAACAAATTTTCAGCTATATGTCAAGATTTTGCAATaca acaaaatatcaaaaacctgAGAGTAAAacttagatttaaatttttacatc TAACATAATCTTCAaaatgattgattgataac

Coding sequence (CDS) from alignment at sc0000723:166353..168984+

>TCONS_00029051 ID=TCONS_00029051|Name=TCONS_00029051|organism=Clytia hemisphaerica|type=CDS|length=9261bp|location=Sequence derived from alignment at sc0000723:166353..168984+ (Clytia hemisphaerica)
CACAGGGAAGACATATTGTCAGCGGTGATCCTTAACAACAGTTTCGACGG
CCTCTGTCAGTATTGCAAATTCGAGAAAATTGCTGTGAAATGTGACACCT
GCTTCTGGAAAAAGCTGTGCATCAAATGTGATGAAAAATTACATGTGGAA
TACCCCATGCACAACCGTATTGGTATTTTTGATGGTTTCAAAAGAACGCT
ATCCCCATCTGAAACAGTCGATGAAGAAAGTGTCATTATTGACAAGTATC
CAACGATACCACTGATGCCCATTAATTGTCAATCATGCGATAGCTATAAT
GTTGAGAGAATTTCTGGTGATTGTGTTGCTGTTGTTACTATAGCAGGCAA
GTATTATCTTCACCTATATTCGTTGAGATGTAAAGATTGTGATTCAACCT
CAAACCCTTTTACCTTGGAAAATGTGGTTGGGTCTGGATTTTGGCCAAGT
GCACCGACCAAATTCAGCTACCTCTTTCATGTAGAAACACTTCAATTTTG
GGACACACTCCGGAAAAACGCGCCTGGAACATCGGAAGCTGCTTTTCTAG
AAGTATTGAATACGATGACGAACCTACATGGAAGGAAAACAGGGAAAATT
ACTCCAGCTATTTTCTCTATGGCATTCAAGGAATGGTGCTTTTGTCAACA
TAAAATACACATACTTCAGAAAAAGAAGTGGATAGAGTGTCCATCTTGCA
CTCACGTCCAACACTCTTGTCATGTCGATGGAAATTGTAAACTCTATCGT
TATCGGAGTTCAGGGAGACGTACAAGGCCAGAGTTTTACAATGGTTTATT
CATTGCTGAAGATACGAAAGTAAAATGTTTCATTGACGAAATATACAAAG
GAAAATTCGGAAAGGGAGAAGCCGATTTTATTTGTGGTGGAAAATGGAAT
GCTGCCCGAAACAAAGCGAGTACCAAAAAATCATTGGATGTTACTGGATT
GGAAGTTATGTCTTGTCGTCATCAACTTGGGCAAAGGGCTCTTAATAAGT
ATCGAGGAGAGATTTACGGTTACCCATTGTACCTCATCAGGGAACACCTT
TCAAcgagaaacatgaaatttgtgTACGCGGACATCATGTGCAAACTTAG
CAAGTTTATCAAGCGTGTCGATGCGGAAACTGCAAACAAATTTACTGGGG
CTTTGTCTGTTATGCATGCAAAAGGTCATGGTATAGATTGTCAgTTCATA
TGGGATGGGAAGTGGATTGACGGTACTGGTCGTTCAACTGGCGAAGAGAC
GGAACAAATTTTCAGCTATATGTCAAGATTTTGCAATacaacaaaatatc
aaaaacctgAGAGTAAAacttagCACAGGGAAGACATATTGTCAGCGGTG
ATCCTTAACAACAGTTTCGACGGCCTCTGTCAGTATTGCAAATTCGAGAA
AATTGCTGTGAAATGTGACACCTGCTTCTGGAAAAAGCTGTGCATCAAAT
GTGATGAAAAATTACATGTGGAATACCCCATGCACAACCGTATTGGTATT
TTTGATGGTTTCAAAAGAACGCTATCCCCATCTGAAACAGTCGATGAAGA
AAGTGTCATTATTGACAAGTATCCAACGATACCACTGATGCCCATTAATT
GTCAATCATGCGATAGCTATAATGTTGAGAGAATTTCTGGTGATTGTGTT
GCTGTTGTTACTATAGCAGGCAAGTATTATCTTCACCTATATTCGTTGAG
ATGTAAAGATTGTGATTCAACCTCAAACCCTTTTACCTTGGAAAATGTGG
TTGGGTCTGGATTTTGGCCAAGTGCACCGACCAAATTCAGCTACCTCTTT
CATGTAGAAACACTTCAATTTTGGGACACACTCCGGAAAAACGCGCCTGG
AACATCGGAAGCTGCTTTTCTAGAAGTATTGAATACGATGACGAACCTAC
ATGGAAGGAAAACAGGGAAAATTACTCCAGCTATTTTCTCTATGGCATTC
AAGGAATGGTGCTTTTGTCAACATAAAATACACATACTTCAGAAAAAGAA
GTGGATAGAGTGTCCATCTTGCACTCACGTCCAACACTCTTGTCATGTCG
ATGGAAATTGTAAACTCTATCGTTATCGGAGTTCAGGGAGACGTACAAGG
CCAGAGTTTTACAATGGTTTATTCATTGCTGAAGATACGAAAGTAAAATG
TTTCATTGACGAAATATACAAAGGAAAATTCGGAAAGGGAGAAGCCGATT
TTATTTGTGGTGGAAAATGGAATGCTGCCCGAAACAAAGCGAGTACCAAA
AAATCATTGGATGTTACTGGATTGGAAGTTATGTCTTGTCGTCATCAACT
TGGGCAAAGGGCTCTTAATAAGTATCGAGGAGAGATTTACGGTTACCCAT
TGTACCTCATCAGGGAACACCTTTCAAcgagaaacatgaaatttgtgTAC
GCGGACATCATGTGCAAACTTAGCAAGTTTATCAAGCGTGTCGATGCGGA
AACTGCAAACAAATTTACTGGGGCTTTGTCTGTTATGCATGCAAAAGGTC
ATGGTATAGATTGTCAgTTCATATGGGATGGGAAGTGGATTGACGGTACT
GGTCGTTCAACTGGCGAAGAGACGGAACAAATTTTCAGCTATATGTCAAG
ATTTTGCAATacaacaaaatatcaaaaacctgAGAGTAAAacttagCACA
GGGAAGACATATTGTCAGCGGTGATCCTTAACAACAGTTTCGACGGCCTC
TGTCAGTATTGCAAATTCGAGAAAATTGCTGTGAAATGTGACACCTGCTT
CTGGAAAAAGCTGTGCATCAAATGTGATGAAAAATTACATGTGGAATACC
CCATGCACAACCGTATTGGTATTTTTGATGGTTTCAAAAGAACGCTATCC
CCATCTGAAACAGTCGATGAAGAAAGTGTCATTATTGACAAGTATCCAAC
GATACCACTGATGCCCATTAATTGTCAATCATGCGATAGCTATAATGTTG
AGAGAATTTCTGGTGATTGTGTTGCTGTTGTTACTATAGCAGGCAAGTAT
TATCTTCACCTATATTCGTTGAGATGTAAAGATTGTGATTCAACCTCAAA
CCCTTTTACCTTGGAAAATGTGGTTGGGTCTGGATTTTGGCCAAGTGCAC
CGACCAAATTCAGCTACCTCTTTCATGTAGAAACACTTCAATTTTGGGAC
ACACTCCGGAAAAACGCGCCTGGAACATCGGAAGCTGCTTTTCTAGAAGT
ATTGAATACGATGACGAACCTACATGGAAGGAAAACAGGGAAAATTACTC
CAGCTATTTTCTCTATGGCATTCAAGGAATGGTGCTTTTGTCAACATAAA
ATACACATACTTCAGAAAAAGAAGTGGATAGAGTGTCCATCTTGCACTCA
CGTCCAACACTCTTGTCATGTCGATGGAAATTGTAAACTCTATCGTTATC
GGAGTTCAGGGAGACGTACAAGGCCAGAGTTTTACAATGGTTTATTCATT
GCTGAAGATACGAAAGTAAAATGTTTCATTGACGAAATATACAAAGGAAA
ATTCGGAAAGGGAGAAGCCGATTTTATTTGTGGTGGAAAATGGAATGCTG
CCCGAAACAAAGCGAGTACCAAAAAATCATTGGATGTTACTGGATTGGAA
GTTATGTCTTGTCGTCATCAACTTGGGCAAAGGGCTCTTAATAAGTATCG
AGGAGAGATTTACGGTTACCCATTGTACCTCATCAGGGAACACCTTTCAA
cgagaaacatgaaatttgtgTACGCGGACATCATGTGCAAACTTAGCAAG
TTTATCAAGCGTGTCGATGCGGAAACTGCAAACAAATTTACTGGGGCTTT
GTCTGTTATGCATGCAAAAGGTCATGGTATAGATTGTCAgTTCATATGGG
ATGGGAAGTGGATTGACGGTACTGGTCGTTCAACTGGCGAAGAGACGGAA
CAAATTTTCAGCTATATGTCAAGATTTTGCAATacaacaaaatatcaaaa
acctgAGAGTAAAacttagCACAGGGAAGACATATTGTCAGCGGTGATCC
TTAACAACAGTTTCGACGGCCTCTGTCAGTATTGCAAATTCGAGAAAATT
GCTGTGAAATGTGACACCTGCTTCTGGAAAAAGCTGTGCATCAAATGTGA
TGAAAAATTACATGTGGAATACCCCATGCACAACCGTATTGGTATTTTTG
ATGGTTTCAAAAGAACGCTATCCCCATCTGAAACAGTCGATGAAGAAAGT
GTCATTATTGACAAGTATCCAACGATACCACTGATGCCCATTAATTGTCA
ATCATGCGATAGCTATAATGTTGAGAGAATTTCTGGTGATTGTGTTGCTG
TTGTTACTATAGCAGGCAAGTATTATCTTCACCTATATTCGTTGAGATGT
AAAGATTGTGATTCAACCTCAAACCCTTTTACCTTGGAAAATGTGGTTGG
GTCTGGATTTTGGCCAAGTGCACCGACCAAATTCAGCTACCTCTTTCATG
TAGAAACACTTCAATTTTGGGACACACTCCGGAAAAACGCGCCTGGAACA
TCGGAAGCTGCTTTTCTAGAAGTATTGAATACGATGACGAACCTACATGG
AAGGAAAACAGGGAAAATTACTCCAGCTATTTTCTCTATGGCATTCAAGG
AATGGTGCTTTTGTCAACATAAAATACACATACTTCAGAAAAAGAAGTGG
ATAGAGTGTCCATCTTGCACTCACGTCCAACACTCTTGTCATGTCGATGG
AAATTGTAAACTCTATCGTTATCGGAGTTCAGGGAGACGTACAAGGCCAG
AGTTTTACAATGGTTTATTCATTGCTGAAGATACGAAAGTAAAATGTTTC
ATTGACGAAATATACAAAGGAAAATTCGGAAAGGGAGAAGCCGATTTTAT
TTGTGGTGGAAAATGGAATGCTGCCCGAAACAAAGCGAGTACCAAAAAAT
CATTGGATGTTACTGGATTGGAAGTTATGTCTTGTCGTCATCAACTTGGG
CAAAGGGCTCTTAATAAGTATCGAGGAGAGATTTACGGTTACCCATTGTA
CCTCATCAGGGAACACCTTTCAAcgagaaacatgaaatttgtgTACGCGG
ACATCATGTGCAAACTTAGCAAGTTTATCAAGCGTGTCGATGCGGAAACT
GCAAACAAATTTACTGGGGCTTTGTCTGTTATGCATGCAAAAGGTCATGG
TATAGATTGTCAgTTCATATGGGATGGGAAGTGGATTGACGGTACTGGTC
GTTCAACTGGCGAAGAGACGGAACAAATTTTCAGCTATATGTCAAGATTT
TGCAATacaacaaaatatcaaaaacctgAGAGTAAAacttagCACAGGGA
AGACATATTGTCAGCGGTGATCCTTAACAACAGTTTCGACGGCCTCTGTC
AGTATTGCAAATTCGAGAAAATTGCTGTGAAATGTGACACCTGCTTCTGG
AAAAAGCTGTGCATCAAATGTGATGAAAAATTACATGTGGAATACCCCAT
GCACAACCGTATTGGTATTTTTGATGGTTTCAAAAGAACGCTATCCCCAT
CTGAAACAGTCGATGAAGAAAGTGTCATTATTGACAAGTATCCAACGATA
CCACTGATGCCCATTAATTGTCAATCATGCGATAGCTATAATGTTGAGAG
AATTTCTGGTGATTGTGTTGCTGTTGTTACTATAGCAGGCAAGTATTATC
TTCACCTATATTCGTTGAGATGTAAAGATTGTGATTCAACCTCAAACCCT
TTTACCTTGGAAAATGTGGTTGGGTCTGGATTTTGGCCAAGTGCACCGAC
CAAATTCAGCTACCTCTTTCATGTAGAAACACTTCAATTTTGGGACACAC
TCCGGAAAAACGCGCCTGGAACATCGGAAGCTGCTTTTCTAGAAGTATTG
AATACGATGACGAACCTACATGGAAGGAAAACAGGGAAAATTACTCCAGC
TATTTTCTCTATGGCATTCAAGGAATGGTGCTTTTGTCAACATAAAATAC
ACATACTTCAGAAAAAGAAGTGGATAGAGTGTCCATCTTGCACTCACGTC
CAACACTCTTGTCATGTCGATGGAAATTGTAAACTCTATCGTTATCGGAG
TTCAGGGAGACGTACAAGGCCAGAGTTTTACAATGGTTTATTCATTGCTG
AAGATACGAAAGTAAAATGTTTCATTGACGAAATATACAAAGGAAAATTC
GGAAAGGGAGAAGCCGATTTTATTTGTGGTGGAAAATGGAATGCTGCCCG
AAACAAAGCGAGTACCAAAAAATCATTGGATGTTACTGGATTGGAAGTTA
TGTCTTGTCGTCATCAACTTGGGCAAAGGGCTCTTAATAAGTATCGAGGA
GAGATTTACGGTTACCCATTGTACCTCATCAGGGAACACCTTTCAAcgag
aaacatgaaatttgtgTACGCGGACATCATGTGCAAACTTAGCAAGTTTA
TCAAGCGTGTCGATGCGGAAACTGCAAACAAATTTACTGGGGCTTTGTCT
GTTATGCATGCAAAAGGTCATGGTATAGATTGTCAgTTCATATGGGATGG
GAAGTGGATTGACGGTACTGGTCGTTCAACTGGCGAAGAGACGGAACAAA
TTTTCAGCTATATGTCAAGATTTTGCAATacaacaaaatatcaaaaacct
gAGAGTAAAacttagCACAGGGAAGACATATTGTCAGCGGTGATCCTTAA
CAACAGTTTCGACGGCCTCTGTCAGTATTGCAAATTCGAGAAAATTGCTG
TGAAATGTGACACCTGCTTCTGGAAAAAGCTGTGCATCAAATGTGATGAA
AAATTACATGTGGAATACCCCATGCACAACCGTATTGGTATTTTTGATGG
TTTCAAAAGAACGCTATCCCCATCTGAAACAGTCGATGAAGAAAGTGTCA
TTATTGACAAGTATCCAACGATACCACTGATGCCCATTAATTGTCAATCA
TGCGATAGCTATAATGTTGAGAGAATTTCTGGTGATTGTGTTGCTGTTGT
TACTATAGCAGGCAAGTATTATCTTCACCTATATTCGTTGAGATGTAAAG
ATTGTGATTCAACCTCAAACCCTTTTACCTTGGAAAATGTGGTTGGGTCT
GGATTTTGGCCAAGTGCACCGACCAAATTCAGCTACCTCTTTCATGTAGA
AACACTTCAATTTTGGGACACACTCCGGAAAAACGCGCCTGGAACATCGG
AAGCTGCTTTTCTAGAAGTATTGAATACGATGACGAACCTACATGGAAGG
AAAACAGGGAAAATTACTCCAGCTATTTTCTCTATGGCATTCAAGGAATG
GTGCTTTTGTCAACATAAAATACACATACTTCAGAAAAAGAAGTGGATAG
AGTGTCCATCTTGCACTCACGTCCAACACTCTTGTCATGTCGATGGAAAT
TGTAAACTCTATCGTTATCGGAGTTCAGGGAGACGTACAAGGCCAGAGTT
TTACAATGGTTTATTCATTGCTGAAGATACGAAAGTAAAATGTTTCATTG
ACGAAATATACAAAGGAAAATTCGGAAAGGGAGAAGCCGATTTTATTTGT
GGTGGAAAATGGAATGCTGCCCGAAACAAAGCGAGTACCAAAAAATCATT
GGATGTTACTGGATTGGAAGTTATGTCTTGTCGTCATCAACTTGGGCAAA
GGGCTCTTAATAAGTATCGAGGAGAGATTTACGGTTACCCATTGTACCTC
ATCAGGGAACACCTTTCAAcgagaaacatgaaatttgtgTACGCGGACAT
CATGTGCAAACTTAGCAAGTTTATCAAGCGTGTCGATGCGGAAACTGCAA
ACAAATTTACTGGGGCTTTGTCTGTTATGCATGCAAAAGGTCATGGTATA
GATTGTCAgTTCATATGGGATGGGAAGTGGATTGACGGTACTGGTCGTTC
AACTGGCGAAGAGACGGAACAAATTTTCAGCTATATGTCAAGATTTTGCA
ATacaacaaaatatcaaaaacctgAGAGTAAAacttagCACAGGGAAGAC
ATATTGTCAGCGGTGATCCTTAACAACAGTTTCGACGGCCTCTGTCAGTA
TTGCAAATTCGAGAAAATTGCTGTGAAATGTGACACCTGCTTCTGGAAAA
AGCTGTGCATCAAATGTGATGAAAAATTACATGTGGAATACCCCATGCAC
AACCGTATTGGTATTTTTGATGGTTTCAAAAGAACGCTATCCCCATCTGA
AACAGTCGATGAAGAAAGTGTCATTATTGACAAGTATCCAACGATACCAC
TGATGCCCATTAATTGTCAATCATGCGATAGCTATAATGTTGAGAGAATT
TCTGGTGATTGTGTTGCTGTTGTTACTATAGCAGGCAAGTATTATCTTCA
CCTATATTCGTTGAGATGTAAAGATTGTGATTCAACCTCAAACCCTTTTA
CCTTGGAAAATGTGGTTGGGTCTGGATTTTGGCCAAGTGCACCGACCAAA
TTCAGCTACCTCTTTCATGTAGAAACACTTCAATTTTGGGACACACTCCG
GAAAAACGCGCCTGGAACATCGGAAGCTGCTTTTCTAGAAGTATTGAATA
CGATGACGAACCTACATGGAAGGAAAACAGGGAAAATTACTCCAGCTATT
TTCTCTATGGCATTCAAGGAATGGTGCTTTTGTCAACATAAAATACACAT
ACTTCAGAAAAAGAAGTGGATAGAGTGTCCATCTTGCACTCACGTCCAAC
ACTCTTGTCATGTCGATGGAAATTGTAAACTCTATCGTTATCGGAGTTCA
GGGAGACGTACAAGGCCAGAGTTTTACAATGGTTTATTCATTGCTGAAGA
TACGAAAGTAAAATGTTTCATTGACGAAATATACAAAGGAAAATTCGGAA
AGGGAGAAGCCGATTTTATTTGTGGTGGAAAATGGAATGCTGCCCGAAAC
AAAGCGAGTACCAAAAAATCATTGGATGTTACTGGATTGGAAGTTATGTC
TTGTCGTCATCAACTTGGGCAAAGGGCTCTTAATAAGTATCGAGGAGAGA
TTTACGGTTACCCATTGTACCTCATCAGGGAACACCTTTCAAcgagaaac
atgaaatttgtgTACGCGGACATCATGTGCAAACTTAGCAAGTTTATCAA
GCGTGTCGATGCGGAAACTGCAAACAAATTTACTGGGGCTTTGTCTGTTA
TGCATGCAAAAGGTCATGGTATAGATTGTCAgTTCATATGGGATGGGAAG
TGGATTGACGGTACTGGTCGTTCAACTGGCGAAGAGACGGAACAAATTTT
CAGCTATATGTCAAGATTTTGCAATacaacaaaatatcaaaaacctgAGA
GTAAAacttag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016522XLOC_016522Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029051-proteinTCONS_00029051-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029051-exon-sc0000723-1491911889:166353..166601TCONS_00029051-exon-sc0000723-1491911889:166353..166601Clytia hemisphaericaexon
TCONS_00029051-exon-sc0000723-1510915933:166353..166601TCONS_00029051-exon-sc0000723-1510915933:166353..166601Clytia hemisphaericaexon
TCONS_00029051-exon-sc0000723-1575043694:166353..166601TCONS_00029051-exon-sc0000723-1575043694:166353..166601Clytia hemisphaericaexon
TCONS_00029051-exon-sc0000723-1491911889:167030..167128TCONS_00029051-exon-sc0000723-1491911889:167030..167128Clytia hemisphaericaexon
TCONS_00029051-exon-sc0000723-1510915933:167030..167128TCONS_00029051-exon-sc0000723-1510915933:167030..167128Clytia hemisphaericaexon
TCONS_00029051-exon-sc0000723-1575043694:167030..167128TCONS_00029051-exon-sc0000723-1575043694:167030..167128Clytia hemisphaericaexon
TCONS_00029051-exon-sc0000723-1491911889:167321..167559TCONS_00029051-exon-sc0000723-1491911889:167321..167559Clytia hemisphaericaexon
TCONS_00029051-exon-sc0000723-1510915933:167321..167559TCONS_00029051-exon-sc0000723-1510915933:167321..167559Clytia hemisphaericaexon
TCONS_00029051-exon-sc0000723-1575043694:167321..167559TCONS_00029051-exon-sc0000723-1575043694:167321..167559Clytia hemisphaericaexon
TCONS_00029051-exon-sc0000723-1491911889:167707..167888TCONS_00029051-exon-sc0000723-1491911889:167707..167888Clytia hemisphaericaexon
TCONS_00029051-exon-sc0000723-1510915933:167707..167888TCONS_00029051-exon-sc0000723-1510915933:167707..167888Clytia hemisphaericaexon
TCONS_00029051-exon-sc0000723-1575043694:167707..167888TCONS_00029051-exon-sc0000723-1575043694:167707..167888Clytia hemisphaericaexon
TCONS_00029051-exon-sc0000723-1491911889:168035..168131TCONS_00029051-exon-sc0000723-1491911889:168035..168131Clytia hemisphaericaexon
TCONS_00029051-exon-sc0000723-1510915933:168035..168131TCONS_00029051-exon-sc0000723-1510915933:168035..168131Clytia hemisphaericaexon
TCONS_00029051-exon-sc0000723-1575043694:168035..168131TCONS_00029051-exon-sc0000723-1575043694:168035..168131Clytia hemisphaericaexon
TCONS_00029051-exon-sc0000723-1491911889:168350..168679TCONS_00029051-exon-sc0000723-1491911889:168350..168679Clytia hemisphaericaexon
TCONS_00029051-exon-sc0000723-1510915933:168350..168679TCONS_00029051-exon-sc0000723-1510915933:168350..168679Clytia hemisphaericaexon
TCONS_00029051-exon-sc0000723-1575043694:168350..168679TCONS_00029051-exon-sc0000723-1575043694:168350..168679Clytia hemisphaericaexon
TCONS_00029051-exon-sc0000723-1491911889:168807..168984TCONS_00029051-exon-sc0000723-1491911889:168807..168984Clytia hemisphaericaexon
TCONS_00029051-exon-sc0000723-1510915933:168807..168984TCONS_00029051-exon-sc0000723-1510915933:168807..168984Clytia hemisphaericaexon
TCONS_00029051-exon-sc0000723-1575043694:168807..168984TCONS_00029051-exon-sc0000723-1575043694:168807..168984Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000723supercontigsc0000723:166353..168984 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.213171 0.178179 0.0689609 0 0.985622 1.00602 1.09626 1.02631 0.9495 1.52576 1.26497 0.93295 1.15444 1.262 1.3315 1.46602 0.25147 0.632657 0.356094 0.711379 0.883311 1.03404 0.209501 0.2857 1.11167 1.40066 0.375814 0.356514 0.304204 0.137749
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00029051 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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