TCONS_00029053 (transcript) - C. hemisphaerica

Overview
NameTCONS_00029053
Unique NameTCONS_00029053
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3298

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00029053 ID=TCONS_00029053|Name=TCONS_00029053|organism=Clytia hemisphaerica|type=transcript|length=3298bp
AGCAACCATGAAATTCTGGAATGAAGCATGGCTGAAAGAAGgATTTGCAA
CCTTCATAGCTTACATAGTCATCGAGGATATCAATCCATCGATGGAGTTG
ATGAACACTGTTTTATCAGATCTCATGTTGAAAGCCATGGATATTGATTC
TTTCTCCACATCTAAACCCATTTCAAGAACGGTGAACACACCGAATGAGA
TTCGTCAAATCTTCGATTCTATTACTTATTACAAAGGATGCTGTATGGTT
CAAACATTGTATTGTTACATGGGCAAAGCTAACTTTCAGAGAGGAATGCA
ACGATACTTGAAAACTTACTCTTACGGAAACGCTAATCAAGATGATCTGT
GGAATGAACTAAGTAAAGAGTCAGGAGGAAAAGATATCAAATCAGTGATG
GACACTTGGACCAAACAGATTGGCCATCCCGTAATCACAACAAAAAGAAT
CAATGCCACACATATGCAAGTCAAACAGGATAGATTCAAGCTGGATCCGC
CAGGAATCGAGGCTCCGAAATCACCATTCAACTATCGATGGAAGGTCCCT
ATCATCGTCAAAAACATCAATTCTAAACAACAGAAAACACATCTTTTATC
CACAGAAGAAGATATTTTCCCAATAACAAACGATGACCTATTGAATCCTG
ATCACAGTCTGTATTATCGAGTCAATTACGGCGAAGAGACCTTTGCTCGT
TTGGTCAAAGAATTGAACAACGATCATCTTAAGCTGACAGAGCTTGACAG
GGCTGGTTTGGTGTCAGATTATTTCTACTTGTTCAAAGCcaaattaaaaa
cattgaacGAAACACTAAAGACATTGGATTACATTGAGAACGAGCAAGCA
AGTACGGTATGGGATATTGCTGCGGGTGAAATGGGACAACTCTCTGCACT
TATTCAATCAAAGGATCATAAAGACAAATGGAGAAAATTTGTCTTCACCA
AAGTCAACAAAACCGTGTCGTCAATTGGTTGGGAGACGAAATCGACATAC
AAAGAAAGTGCCTTGCAAACGACAATGCTGAGGTTCGGATGTCATATGAA
CATTTCAAGTGTCGTCCAAACTGCCAAACTTAAATTTAGTGAATGGATGA
ACGGTACATTGGTATTGGACAAGAATTTGTATCCAGTGATGCGAGAATGT
GCTATTTCAAATTCACTGAACGATGATACCTTCTTCGCGTACACTTATCA
ACGATACTTAGAGACAAGAGACAATGCTTTACTGACTTCTCTAACCACAG
TCAAGAACCCGAAACTTATCCAAAGtttcttgcaAGACGCATTAAACAAG
AGCATAGTAAAAGATAATGATGCGTCTTACACAATCGGAAAGATTGCCAA
ATACAGTCAACAAGGGAAAGACATGGCATGGAATCTGGTCAAAGAACGAT
GGAGCGAGATCTTTCAAAGATATGGAGATAACATCTTTCTTCTAGCACGT
TTACTTACAGCAGTTTTAGAAGATTTTTCGACTGAACAAAAACTGAAAGA
CATCCAAGCGTTTTTCAAAGAGAAGAAAAATCTAGGAAGCGGTAAGAACG
CTATCGACCAAGCAATATTGAAGATCAAGTTTCGTATTGTGTATAGAGAC
ATCATCAATAACGATCCTTGGTTTCGATAAATTGTAAAAGTGGATTTGGT
AAGCGAACATTAAACACACTACagatatacacgcttttttgaTATAGAAA
TAGTGTAccttggatgagggtcaagtattcttaaggaagtgccaaaattg
agggtgaaatattcttaacgtattcttagaGTTTTagacttttgagtgaa
catttaGGTTAAgattacatttcttcctcaaagcttcaatttatatCTAA
CAAAGGAaacagttttttctgttaaccaaatacaaaatgactatattctt
atcaaattcggTGAAATtcagagggtattcttagggtattcttaagattt
tcaccctgatattcttatagaaaatattcttattaaaaaaagcgtgtatt
tttaTAACAATTTGATTAACGATGACATCGCCAGACTATTAAAGAGAACC
CTAAGTCCTTTGGAACTTATTCATTGGGTAACGACGTAAACAATTACGCA
GGCATAATAAACACACCATATGTTTTTTACGCAATCGAGATTATTTTTTA
CTGTATCcttcaattaaaaaatataatacaaaatttaaatcaaaaaaagg
taatattatttattaaaatgACTCCCGTCCTCAAATGGAGCGAAAAGTTT
GTCGAATCTGAATCTTCCAATCACTTAAGAGATCTGTGAATTTGTCTTTT
ATATACAGAAGAAATAATGATAATGTAAGTAATTATAGTTACATCACTCG
TTCATTTTCTAATAATAGTTTGAGTAATAAGCCGATTGGTTCTTGCTTTT
CCCTGCTTTTCCGCCCTTCGGTTTACATTTCTTGACGCAAGCCAAGAAGG
TTTTCAAACAATCTTTTCCTTTGCTTTTCTTGCACTTTTTGAACGTAGCT
TTGCACTGAaagaataaaacaaagaaaatgtaaacCTTCAAATCTACAGT
GGACTTAACAAGTGAGATTTCTTTCTTCAAGCTTGTGTACTCCTTCTTTA
AGcaagaatatttttcttaccTTTCGAGCGCACTTGCTCAAATGTGGACA
TTTGTGAGCGCATTTCTTGTAAAATCCTCCACATTTTTTATGGTTGTGAA
TTCTTCGGACACACATCCGGTAGCCTTCCCTGCACTACAAATAAAAGGGT
GAACAAAAGATAGACACCGAGGTGTAGACTTTCTTTTCGAGTATGTATCT
CTGAAATCCTTTTTCTAGCCATGATCTGGTTTTTAATCGTACGTCACTCC
GAGAGTAAATTTTCgcaaaattcaaatattttgcgagttgtttttttctt
gcgaaatttctttcttccaaaaattatttttgatcgATTAGCGAACATGT
GACTCTGATAGGCACTGAAACTCCGCAATCCTCTTAAAACTTGAGTTATC
TAATTTGGTGTTCTTGTGACCTAGCGTGTGTGGGGGTGAACAAATATAGA
CTACTGAACCCCAAAGGTTCAAGTTCTAGACAGTTCATTCAGCTTAcctt
tttgtaacattttttctTACACACGAGAAATTTCTTTCCACATTTGATAT
GAGCTTCTCGAGTTCCACCCTCCTTCTTCACGCACGCTAGATATTCAAGG
TTGCACTGTGGAGAAAAGGGAAATAGAATAAGGTAAATCGGTCACATTTA
CAGAGAATATACTATGTCTTacgatttcgaaaaattgatagcagatac
Run BLAST on NCBI

transcript from alignment at sc0000723:37361..46139-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00029053 ID=TCONS_00029053|Name=TCONS_00029053|organism=Clytia hemisphaerica|type=transcript|length=8779bp|location=Sequence derived from alignment at sc0000723:37361..46139- (Clytia hemisphaerica)
AGCAACCATGAAATTCTGGAATGAAGCATGGCTGAAAGAAGGTCAGTTAT
GTTTAGGATTTTCAGATTCGATACATTAGAATTTATGTACCTTTTCAATG
TTTCTTAGATCTATAACTCTTAGTATGGTAATATAACAGACACTGCTTTC
AAGAGCTCAATTGAATTTAATTGGCTTCTTACTTGTTTTTGTTGCTTGCC
CTTTTACTGATTAATCTTAAATGTTTTTCGATTTTTTCAGGATTTGCAAC
CTTCATAGCTTACATAGTCATCGAGGATATCAATCCATCGATGGAGTTGA
TGAACACTGTTTTATCAGATCTCATGTTGAAAGCCATGGATATTGATTCT
TTCTCCACATCTAAACCCATTTCAAGAACGGTATACTTTTATGATATCAA
ATTTGCTTTTTTGAAAATGAATCCGTTGTTTCTTCCTTACGTTTTCACCT
TGACTTCGTTACTATTTTCTTTCGTTAGAATTACACACAAGATCTATCAT
TGTTTTGCCTTAGGTCTTAGATATGCGGTGACCAAGACCTGAGTGATGTT
CTGATGTTCCATATTTTCTTATGGAAGTCAACGCTAAAGTTTTACCCTGC
CTCAGATCTGTAAATGATCCATATGCTATCAACTGTTTTTCATTTCTTTT
CTTTGACTTTAAGGTGAACACACCGAATGAGATTCGTCAAATCTTCGATT
CTATTACTTATTACAAAGGATGCTGTATGGTTCAAACATTGTATTGTTAC
ATGGGCAAAGCTAACTTTCAGAGAGGAATGCAACGATACTTGAAAACTTA
CTCTTACGGAAACGCTAATCAAGATGATCTGTGGAATGAACTAAGGTATT
AATTGTTTGTTTTTTGTGCTTTTTTGATAAGAAAATTTAGTCCCAGATCG
TGGTTCCCAGGCGCTATCTTGATTTTATTAGGTAGCCCTCAAGCCAGACT
AAATACAAATACTAAATTACTGATTGACTTCAAGAGTGTGCCATTGTGGT
TTGACAATGGTCCCTGCGCGGGAACTTACTCAATTTTTGAATTGTTTAAG
TAAAATTTTTCGAAAATAGTTACCCTTAGGGACTTATATAGTATAGTATA
CTTTTGTACATGATAATCCTTCTATTTACATATTTGCATCAACTGTGCTT
TGGAATTATCTGATCGTCAGAGTTTGTTTGTCAAAATGAAGAAATGTCGA
TCCATATTTTAGTAAATAACCTGGATCACTTGTTCTTTGAATGAAAATCT
GTTTTTGTTATGCCTCGATCGCTCTCAAATTAGTATGACTGCAGTCAGTC
GCAAAAGTCGACTTTTTTCATTTCTTTTTTTTTTCAAATTTTTCGTGGCC
AATTTTAGACGTTAGTTTCCCATTCTGACTGTATATCACAGATCCCGGCA
TCACAGACTAAGAACCGCCGCCTTGGTCAGAAATTTTCCCCGGTGAAGAA
ATGCCATGAAATTTTACCCACATCGAACACTGAAGACTTATGTTCGTGGG
ATACACTAGAATAAGAGAATTGCCACCTGATTTTTAACCTGTAAAAAGAT
AAAACCTACACCATTAACGAATGGGATTTCCCTAGTCAGTCTTTTCCGCC
TTTATTGTATACTGCTCATTAAAAGATTCTTAATGGATCAATGTGTCCAA
ACGATTGGCCAGATGGAAAGGTTTTCAAATTTGTTGGCATGTATCAAAGG
GCTTGCAATCATATTTCAAACAATCTAAGGATGTATTACCTTATCGGGGA
AAAAATGTCGGGGAAAGTGAAGAAAAATTTGAGGGGTGACGAAATCTTTC
CCCGGCGATATTTATCCCCTACATTTTATCACCCGACCTAAAATTTTACC
CGATTTTTTTATCCCAGACCAAAACTTTTACTCGATATATATCCAAATAC
TTTACGCCTTTATCAACCGAAATTAGTGCTTTAAACGTCGAATTAAAAAA
TCTATTTTCGAGCTAGTGAAGGACACCATTTTATTTGGACAATTTCGTCG
GGTGGAAGTGACGAATTGTAAATTTGGTCGAGAAAAAGTGACGAAAATGC
CTCTAGGTGACGAAATTTTTCTCCGACGAAATAAACCCCGACTAATTAAC
CCCGATAAGGTATAAGGGTATATAAAAGTAAACTATGGGATATCGCCATT
TTGTAAACATGAAATTACCTCAAAAATTACACCGGGCCATTAATCAGGGC
CATTCAGTCCATCAAACAGTTATAAGTAGCCCCTGGGCTTCGGCAAACCT
GAATGTAAAAGTTTTCAAGATAACAGTGTACTTTATAATATTTCCTTTCC
TCTCAGTAAAGAGTCAGGAGGAAAAGATATCAAATCAGTGATGGACACTT
GGACCAAACAGATTGGCCATCCCGTAATCACAACAAAAAGAATCAATGCC
ACACATATGCAAGTCAAACAGGATAGATTCAAGCTGGATCCGCCAGGAAT
CGGTATACTTTATTATCTTATCATTTCATTGAATCCTTTGTTTGCGTTTT
TATGTACGTTCCCTCGCTACCCTTTAAGCTCCAAGGTCAAAGTTTGAAAC
TTTCTCAAATTACCAAAAGCTTGCAGACCTTTCTAACTCTAAAGCAGTTA
TCTGAATCTTCGTGAATGACTTTGAATGTTTTGACGGATTTTATTGAACT
TTTACATTCCGAATTCTACAGACCTCTTGTCCAAGATAACTGGTGTTTGA
AACAGGTTTCTAATGCATCTTTCTTTCCTTATTAACATAAAATTATTTTA
AAAATTCTTGACAATTTTAACATTTCAGAGGCTCCGAAATCACCATTCAA
CTATCGATGGAAGGTCCCTATCATCGTCAAAAACATCAATTCTAAACAAC
AGAAAACACATCTTTTATCCACAGAAGAAGATATTTTCCCAATAACAAAC
GATGACCTATTGAATCCTGATCACAGTCTGTATTATCGAGTCAATTACGG
CGAAGAGACCTTTGCTCGTTTGGTCAAAGAATTGAACAACGATCATCTTA
AGCTGACAGAGCTTGACAGGGCTGGTTTGGTGTCAGATTATTTCTACTTG
TTCAAAGCCAAATTAAAAACATTGAACGAAACACTAAAGACATTGGATTA
CATTGAGGTAAGTTTTGGTCACTTTTTGAATCCTTGGTGTTGTGTGTAAA
AACTTGGTAACTTTTAAGTGTTTTTACTGAGGATGTAAAATTTTGTTTCA
ATGTCTTCATAGGAATTTTGCATAGTTCCATAAGTAGCGATTAGATTTTT
CTTAATCTCGGAGATACGACCATTTATAGGTTGAATGCCCTTGGGACTTT
TCTCAATTCGAATTTCTTCAGATTTCTATTATTTCACTCATGAGCCTGAA
TGTGGTTTAAAATGTTGGCGTTGAGAAACAAGACTTTCATTTTGCGTTAT
TTTAGAACGAGCAAGCAAGTACGGTATGGGATATTGCTGCGGGTGAAATG
GGACAACTCTCTGCACTTATTCAATCAAAGGATCATAAAGACAAATGGAG
AAAATTTGTCTTCACCAAAGTCAACAGTACGGCATTTTGTCTTTCATAAG
CAAGAAAGTTTAGGTCCATTAACCCTAAGCTCGTTCGAGTTTTGTAGCCC
CAGGGTGGGGGTAGAATCTAACGCCCTTGAATATTTTTTATCTCTGTGGC
CATGGAATTTTGTACCAATATTCTTTATCATGAAAAAAAACCTCCATGAA
GAAAAAAAGTGATGACGTCATCACAAAATGTCCATCTATCGGCTTACAAA
ATGTGCCTCTCAGTTTCGAACCAAAAAAGATAGTCGGAGCTATGCTTGCA
GTGTTTTCTATTGAGATTTACTGTTAAGATCAATGCTTAAAACTAGTGAG
ATTTACCAAAATTGATGACGTCATTATTTTCAAAAACTTATGCAATTTTC
AAAATTGTCCATACAAACCTCGTGTCAAAAATTTGAACATTATTGAATAA
TTAGTTAGTTGAATTTTATTTTATAAATTATAATTTTTAGTTCAGCATTT
TAAAGTTTTGAGTTTTGAGAGATTTAAGCTGGGTTTTATGTCATGTTTTA
TGTCGTTTTCTCCCGGGGGCACTTATATGATTTGGCCTACGTCATGTGTC
GCGCTTAAGGGTGGGGGTTTTCAGCATCCCAAAATGCACTGTAAGGGTGT
GTTTCTGTGAGCTTGCGCTACAAGGGTCGAATTTTAAAACAAAATTCAAA
ATAATTGTTAAAATAAAAAGGTTTTTACTTCTCGTTTGTTTGAAAAGTTT
CTATTGTCTGATAATTACAACTGACAAGAATAATTTTCTCAGTTTTTCGT
TGAAACAGAAAATTTTCCAAGCTTCTTCTTTCACGCAGATTTACAGCTGA
GAATTATAGTGCACTATAAGGGTTGGGTAAATCAAGAGAAAATGTACTTT
AAGGGTACAATTTTTTGAAAAGCAGATTTTGCGCGGCACATACCGTCGTT
TCGAAATCGAGTGCCCCCCCCCCGTGTTTTCTTCGAAGACCATGACTTAT
GCGAAATATTTAGTCTGTAAAAGCTGCTGCCTAGACGTGCTGATTAGAGT
CAGTAATATTATGACTTCAAACTTGATTATTCCAGAAACCGTGTCGTCAA
TTGGTTGGGAGACGAAATCGACATACAAAGAAAGTGCCTTGCAAACGACA
ATGCTGAGGTTCGGATGTCATATGAACATTTCAAGTGTCGTCCAAACTGC
CAAACTTAAATTTAGGTAAGTTTTTTATTAACTCGTTGCATATACAGATT
GTTGGTTAATGGAACAATGATTAGTTGTGGTTCTCTGGTCTTGAAGCTTG
ATGCATCGTGAAATTATCGAACAGCAAGAAGATTATCCTGAACATTCTCG
TTTTTACCAACACACTTTGTGCAAGAATTGATTTCAATACCACGATAGAG
AATCCAATATGTTATTAAATATGCAGGAGAAAGTTTTGGGAAAAGAACTT
ACTACTCTTCTAATATTTCACCTTTTTGCTACTTTCCTAAACAAAACTTT
GTAAAAGAGATGGGAAAAATAGTAAGATATTTTACAACTTTTATGATTTC
TACAACTTTTCTTGGCCAAAACTTTGAGTTTTGGATGGGAAAAGTGGGAG
GATTAGCAAATTTATGTACCTACCTGTACTTTCTCCTGATGTTTACATTT
TAGTGAATGGATGAACGGTACATTGGTATTGGACAAGAATTTGTATCCAG
TGATGCGAGAATGTGCTATTTCAAATTCACTGAACGATGATACCTTCTTC
GCGTACACTTATCAACGATACTTAGAGACAAGAGACAATGCTTTACTGAC
TTCTCTAACCACAGTCAAGAACCCGAAACTTATCCAAAGGTAATAATTTG
TTTTCTTAATCTTAGTACTAATCCTTAGTATCTGTCATGAATAGATTCAA
CTAGGTTTTTACTACATCGCCAATGTTTCGTTTCCAAATGGTGCAATGAT
GAAGATATTCATTTTTACAATTCACTCTCTCTAATTCAATCTTTAAGGGA
CTAAATATCATTTTCGAATTAGAGAAAGATTCGTATTACAAAGAGTAATT
TAAACCATTTGTCAGCCGAGGCGACCAACTAGAGAACTAGAGAAAGTTGA
CTGTAATCGGTTTCATTACATTTGTGAATTAGTTCTACCGGGACAGTTGA
TGTGTAACCTTTATACCCCTTCATACAGACCCGGTAGGACTTTTTCAGCC
ATTTGGGAGAGGGTAAAAATAAGNACTGTAATCGGTTTCATTACATTTGT
GAATTAGTTCTACCGGGACAGTTGATGTGTAACCTTTATACCCCTTCATA
CAGACCCGGTAGGACTTTTTCAGCCAGTTGGGAGGGGGGTAAAAATAACG
GATTGTAACTCCAATGAGGATTAATATTATCATGTTTTTTTAAGGCTGGG
GATTTGATTTCCATTGTTTCAAGTAAGAAATTTCAGTGGGATAGAAGAAA
GAATTTGTTTATTTAATTATTTTCAGCGAAGAGAAAAAGTGGAGTTTAAT
TTCCCACTTGGGACGCTATTTTGGCAAATTTTCCCAGTGTGAAGGGGTCC
CACCGGGTCTGTGAGAAGGTGGTGTATCATTCGGTAGATTAGAGTCTTAA
CCAGTAAGGCAGTAGAGTTGAAAAGCCATACTTATGTTAACAGTACGGCA
CGATACCTTATATATTTAAGGAACCTATATTTTTAGGACCATCCTTACAA
GAACCTTTTTTTCCTACTGATCTTCATTTAATCTACTGGATCGTGAAAAA
AACCTCGATCAAGTGAGCAGAGACATAGAGATCTAGAGACCTATTTATAG
GGTTGTCCTTAAATATAGGATATCGCGCCGCGCTGTTAACATAAGAATGG
TCTACGTTTATGGCACGGTCAGTTACTTGCTTCAATCCGATTCAGTTTAT
TTTATGCTTAGCCCATTAAGTGATGTGGGCATCATGAGATCGCTCATATC
TTTCGGTCCTGTTCGGGTAGGTTTAGACCAAGGAACACGGTGACCCAAGC
TGTCGGAATTGGCATTTATTTTTATAGTTGGGTGTGAAGGCGCATTTGAA
GTCAGGAAATGTTTGAAAATTTGAGGTTACGAAGTGATGGAATTTAATTG
ATTAATCTCATCTAGTTGCAGAGGTATGATCGGTAAAGGTCAACCTTCCC
TCCAAAGAGTTTTGTGCATTTCCAGGTACTAAACTGAGTAAAAGAAGACT
AATAAGAGACTTTTTTATAATTTTGTTTCACCACCCAAATGTTGTTTATT
TTTCAGTTTCTTGCAAGACGCATTAAACAAGAGCATAGTAAAAGATAATG
ATGCGTCTTACACAATCGGAAAGATTGCCAAATACAGTCAACAAGGGAAA
GACATGGCATGGAATCTGGTCAAAGAACGATGGAGCGAGATCTTTCAAAG
ATATGGAGATAACATCTTTCTTCTAGCACGTTTACTTACAGCAGTTTTAG
AAGATTTTTCGACTGAACAAAAACTGAAAGACATCCAAGCGTTTTTCAAA
GAGAAGAAAAATCTAGGAAGCGGTAAGAACGCTATCGACCAAGCAATATT
GAAGATCAAGTTTCGTATTGTGTATAGAGACATCATCAATAACGATCCTT
GGTTTCGATAAATTGTAAAAGTGGATTTGGTAAGCGAACATTAAACACAC
TACAGATATACACGCTTTTTTGATATAGAAATAGTGTACCTTGGATGAGG
GTCAAGTATTCTTAAGGAAGTGCCAAAATTGAGGGTGAAATATTCTTAAC
GTATTCTTAGAGTTTTAGACTTTTGAGTGAACATTTAGGTTAAGATTACA
TTTCTTCCTCAAAGCTTCAATTTATATCTAACAAAGGAAACAGTTTTTTC
TGTTAACCAAATACAAAATGACTATATTCTTATCAAATTCGGTGAAATTC
AGAGGGTATTCTTAGGGTATTCTTAAGATTTTCACCCTGATATTCTTATA
GAAAATATTCTTATTAAAAAAAGCGTGTATTTTTATAACAATTTGATTAA
CGATGACATCGCCAGACTATTAAAGAGAACCCTAAGTCCTTTGGAACTTA
TTCATTGGGTAACGACGTAAACAATTACGCAGGCATAATAAACACACCAT
ATGTTTTTTACGCAATCGAGATTATTTTTTACTGTATCCTTCAATTAAAA
AATATAATACAAAATTTAAATCAAAAAAAGGTAATATTATTTATTAAAAT
GACTCCCGTCCTCAAATGGAGCGAAAAGTTTGTCGAATCTGAATCTTCCA
ATCACTTAAGAGATCTGTGAATTTGTCTTTTATATACAGAAGAAATAATG
ATAATGTAAGTAATTATAGTTACATCACTCGTTCATTTTCTAATAATAGT
TTGAGTAATAAGCCGATTGGTTCTTGCTTTTCCCTGCTTTTCCGCCCTTC
GGTTTACATTTCTTGACGCAAGCCAAGAAGGTTTTCAAACAATCTTTTCC
TTTGCTTTTCTTGCACTTTTTGAACGTAGCTTTGCACTGAAAGAATAAAA
CAAAGAAAATGTAAACCTTCAAATCTACAGTGGACTTAACAAGTGAGATT
TCTTTCTTCAAGCTTGTGTACTCCTTCTTTAAGCAAGAATATTTTTCTTA
CCTTTCGAGCGCACTTGCTCAAATGTGGACATTTGTGAGCGCATTTCTTG
TAAAATCCTCCACATTTTTTATGGTTGTGAATTCTTCGGACACACATCCG
GTAGCCTTCCCTGCACTACAAATAAAAGGGTGAACAAAAGATAGACACCG
AGGTGTAGACTTTCTTTTCGAGTATGTATCTCTGAAATCCTTTTTCTAGC
CATGATCTGGTTTTTAATCGTACGTCACTCCGAGAGTAAATTTTCGCAAA
ATTCAAATATTTTGCGAGTTGTTTTTTTCTTGCGAAATTTCTTTCTTCCA
AAAATTATTTTTGATCGATTAGCGAACATGTGACTCTGATAGGCACTGAA
ACTCCGCAATCCTCTTAAAACTTGAGTTATCTAATTTGGTGTTCTTGTGA
CCTAGCGTGTGTGGGGGTGAACAAATATAGACTACTGAACCCCAAAGGTT
CAAGTTCTAGACAGTTCATTCAGCTTACCTTTTTGTAACATTTTTTCTTA
CACACGAGAAATTTCTTTCCACATTTGATATGAGCTTCTCGAGTTCCACC
CTCCTTCTTCACGCACGCTAGATATTCAAGGTTGCACTGTGGAGAAAAGG
GAAATAGAATAAGGTAAATCGGTCACATTTACAGAGAATATACTATGTCT
TACGATTTCGAAAAATTGATAGCAGATAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016524XLOC_016524Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029053-exon-sc0000723-1575043694:46099..46139TCONS_00029053-exon-sc0000723-1575043694:46099..46139Clytia hemisphaericaexon
TCONS_00029053-exon-sc0000723-1575043694:45760..45899TCONS_00029053-exon-sc0000723-1575043694:45760..45899Clytia hemisphaericaexon
TCONS_00029053-exon-sc0000723-1575043694:45295..45476TCONS_00029053-exon-sc0000723-1575043694:45295..45476Clytia hemisphaericaexon
TCONS_00029053-exon-sc0000723-1575043694:43688..43833TCONS_00029053-exon-sc0000723-1575043694:43688..43833Clytia hemisphaericaexon
TCONS_00029053-exon-sc0000723-1575043694:43033..43361TCONS_00029053-exon-sc0000723-1575043694:43033..43361Clytia hemisphaericaexon
TCONS_00029053-exon-sc0000723-1575043694:42614..42734TCONS_00029053-exon-sc0000723-1575043694:42614..42734Clytia hemisphaericaexon
TCONS_00029053-exon-sc0000723-1575043694:41425..41554TCONS_00029053-exon-sc0000723-1575043694:41425..41554Clytia hemisphaericaexon
TCONS_00029053-exon-sc0000723-1575043694:40801..40986TCONS_00029053-exon-sc0000723-1575043694:40801..40986Clytia hemisphaericaexon
TCONS_00029053-exon-sc0000723-1575043694:37361..39383TCONS_00029053-exon-sc0000723-1575043694:37361..39383Clytia hemisphaericaexon
TCONS_00029053-exon-sc0000723-1510915933:46099..46139TCONS_00029053-exon-sc0000723-1510915933:46099..46139Clytia hemisphaericaexon
TCONS_00029053-exon-sc0000723-1510915933:45760..45899TCONS_00029053-exon-sc0000723-1510915933:45760..45899Clytia hemisphaericaexon
TCONS_00029053-exon-sc0000723-1510915933:45295..45476TCONS_00029053-exon-sc0000723-1510915933:45295..45476Clytia hemisphaericaexon
TCONS_00029053-exon-sc0000723-1510915933:43688..43833TCONS_00029053-exon-sc0000723-1510915933:43688..43833Clytia hemisphaericaexon
TCONS_00029053-exon-sc0000723-1510915933:43033..43361TCONS_00029053-exon-sc0000723-1510915933:43033..43361Clytia hemisphaericaexon
TCONS_00029053-exon-sc0000723-1510915933:42614..42734TCONS_00029053-exon-sc0000723-1510915933:42614..42734Clytia hemisphaericaexon
TCONS_00029053-exon-sc0000723-1510915933:41425..41554TCONS_00029053-exon-sc0000723-1510915933:41425..41554Clytia hemisphaericaexon
TCONS_00029053-exon-sc0000723-1510915933:40801..40986TCONS_00029053-exon-sc0000723-1510915933:40801..40986Clytia hemisphaericaexon
TCONS_00029053-exon-sc0000723-1510915933:37361..39383TCONS_00029053-exon-sc0000723-1510915933:37361..39383Clytia hemisphaericaexon
TCONS_00029053-exon-sc0000723-1491911889:46099..46139TCONS_00029053-exon-sc0000723-1491911889:46099..46139Clytia hemisphaericaexon
TCONS_00029053-exon-sc0000723-1491911889:45760..45899TCONS_00029053-exon-sc0000723-1491911889:45760..45899Clytia hemisphaericaexon
TCONS_00029053-exon-sc0000723-1491911889:45295..45476TCONS_00029053-exon-sc0000723-1491911889:45295..45476Clytia hemisphaericaexon
TCONS_00029053-exon-sc0000723-1491911889:43688..43833TCONS_00029053-exon-sc0000723-1491911889:43688..43833Clytia hemisphaericaexon
TCONS_00029053-exon-sc0000723-1491911889:43033..43361TCONS_00029053-exon-sc0000723-1491911889:43033..43361Clytia hemisphaericaexon
TCONS_00029053-exon-sc0000723-1491911889:42614..42734TCONS_00029053-exon-sc0000723-1491911889:42614..42734Clytia hemisphaericaexon
TCONS_00029053-exon-sc0000723-1491911889:41425..41554TCONS_00029053-exon-sc0000723-1491911889:41425..41554Clytia hemisphaericaexon
TCONS_00029053-exon-sc0000723-1491911889:40801..40986TCONS_00029053-exon-sc0000723-1491911889:40801..40986Clytia hemisphaericaexon
TCONS_00029053-exon-sc0000723-1491911889:37361..39383TCONS_00029053-exon-sc0000723-1491911889:37361..39383Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000723supercontigsc0000723:37361..46139 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0471463	0.0336417	0.0767086	0.0131995	1.47571	1.06013	0.643733	0.479652	0.48998	0.206738	0	0.931769	0	0	0	0	0	0	0	0	0	0	0.373677	0	0	0	0	0	0	0
Blast
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BLAST of TCONS_00029053 vs. Swiss-Prot (Human)
Match: AMPE (Glutamyl aminopeptidase OS=Homo sapiens GN=ENPEP PE=1 SV=3)

HSP 1 Score: 241.891 bits (616), Expect = 2.936e-66
Identity = 161/540 (29.81%), Postives = 269/540 (49.81%), Query Frame = 2 
Query:    5 TMKFWNEAWLKEGFATFIAYIVIEDINPSMELMNTVLSDLMLKAMDIDSFSTSKPISRTVNTPNEIRQIFDSITYYKGCCMVQTLYCYMGKANFQRGMQRYLKTYSYGNANQDDLWNELSKESGGKDIKSVMDTWTKQIGHPVITTKRINATHMQVKQDRFKLDPPGIEA-PKSPFNYRWKVPIIVKNINSKQQKTHLLSTEEDIF-----PITNDDL-LNPDHSLYYRVNYGEETFARLVKELNNDHLKLTELDRAGLVSDYFYLFXXXXXXXXXXXXXXDYIENEQASTVWDIAAGEMGQLSALIQ-SKDHKDKWRKFVFTKVNKTVSSIGWETKSTYKESALQTTMLRFGCHMNISSVVQTAKLKFSEWMNGTLVLDKNLYPVMRECAISNSLNDDTFFAYTYQRYLET----RDNALLTSLTTVKNPKLIQSFLQDALNKSIVKDNDASYTIGKIAKYSQQGKDMAWNLVKERWSEIFQRYGDNIFLLARLLTAVLEDFSTEQKLKDIQAFFKEKKNLGSGKNAIDQAILKIKFRI 1588
            TM +W + WL EGFA+F  ++ +       ++ + +L + +L   + DS  +S PI  TV TP+EI  +FD I+Y KG  +++ L  ++   NFQ+G Q YL+ Y + NA   D W  L +E+    +K VMDTWT+Q+G+PV+    +      + Q RF LDP    + P S   Y W +P+     N         S +E I      P  N  L +NPDH  +YRVNY   T+  +   L+ +H   +  DRA L+ D F L +A+L      L    Y++ E+    W      +  + ++ +  K+      ++   +V     S+GW     +    L++++L F C M     +  A   F +W+NGT+ L  NL  ++    + NS N+ + + YT ++Y +T        LL  L +VKN  L+  +L    + +++K  D  +T+ +   Y+  GK+MAWN ++  W  +  RY  N   L R++T + E F+TE +L  +++FF +    G+G+   +Q +  +K  I
Sbjct:  405 TMDWWEDLWLNEGFASFFEFLGVNHAETDWQMRDQMLLEDVLPVQEDDSLMSSHPIIVTVTTPDEITSVFDGISYSKGSSILRMLEDWIKPENFQKGCQMYLEKYQFKNAKTSDFWAAL-EEASRLPVKEVMDTWTRQMGYPVLNVNGVK----NITQKRFLLDPRANPSQPPSDLGYTWNIPVKWTEDNITSSVLFNRSEKEGITLNSSNPSGNAFLKINPDHIGFYRVNYEVATWDSIATALSLNHKTFSSADRASLIDDAFALARAQLLDYKVALNLTKYLKREENFLPWQRVISAVTYIISMFEDDKELYPMIEEYFQGQVKPIADSLGWNDAGDHVTKLLRSSVLGFACKMGDREALNNASSLFEQWLNGTVSLPVNLRLLVYRYGMQNSGNEIS-WNYTLEQYQKTSLAQEKEKLLYGLASVKNVTLLSRYLDLLKDTNLIKTQDV-FTVIRYISYNSYGKNMAWNWIQLNWDYLVNRYTLNNRNLGRIVT-IAEPFNTELQLWQMESFFAKYPQAGAGEKPREQVLETVKNNI 936
The following BLAST results are available for this feature:
BLAST of TCONS_00029053 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AMPE2.936e-6629.81Glutamyl aminopeptidase OS=Homo sapiens GN=ENPEP P... [more]
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