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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029092 ID=TCONS_00029092|Name=TCONS_00029092|organism=Clytia hemisphaerica|type=transcript|length=1078bp
TCCGTACAATTTAgagcttttaattcaatttgaacatcaaaatcagaaag
agcaatgaattttgatatgaattcatgtataaaacatgaaatttggtcaa
tttgttccaaaattacgaggttttaagttttgcctggaaaagcttgtgat
gacgtcatcaaaattttcaattttcaaatttttttgcccagccacctgat
gacgtcatctggcaggtagCCATGTGGCAAAATttagtgttactgtttaa
aattaagtttcagaccctctaaggatcatctgtgccaaatttcatgcttt
taccaccatctgaagtattcttacgttctTATGTGCTAACATACCTCACT
ATAAAGGGTCCGATTCTAAAGGCCTAATTTAACAAttcgaccaaaacttg
taacaagcaTACACGCGTTTTTACAAGAATAATTTTACAACAACgcgagg
ctgaaaattggtcaaaacaacaaattaagaacCAGAgcttcagatttcag
aaattacttattttaacagattttaatagattttaaataAAGGAATTAAG
CGTATTGAGAACATCGTAGGAACAGataagcctgaaaatttcaagaagtt
aagaacagcccagcctgagtcaaattttactggttctaataaaaaagcgC
GTACATTCGAACGATCGAATGTTGAAAAAGTCGAACTTTCACTTTAAAAT
ATACAACAAGGCGTATCAAGCGGCATCAAGATTTTCATTCTGTTTGATGA
AAACTTTGTGGTAAACGATCAATGAAGGTCAATGTTTCAAATATTAGCCG
ACTCCAAAAACGCCAGTTTCCGAGAATGCACCAAAAACCCATCCACTGAT
AACAACAACTACAGATCAAGTATCACTCGATTTCTTTCGAAATGCGATGG
CAACGATATTTTTGGATAAATCTCTATTGGGAGCATTACGTAGTCCTTCA
GCGACATGACGTAATTGAACATTGACTTCAGGAGACATGTTTTCACCCTC
TTTCTCGAGCGTGCTTGCAAGGGCGTTCAGTAATTCGTGAAAGCCGTACA
CAATTCCAGCTCGTCGTACTTTGTTCAC Run BLAST on NCBI transcript from alignment at sc0000724:163417..164604+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029092 ID=TCONS_00029092|Name=TCONS_00029092|organism=Clytia hemisphaerica|type=transcript|length=1188bp|location=Sequence derived from alignment at sc0000724:163417..164604+ (Clytia hemisphaerica)
TCCGTACAATTTAgagcttttaattcaatttgaacatcaaaatcagaaag
agcaatgaattttgatatgaattcatgtataaaacatgaaatttggtcaa
tttgttccaaaattacgaggttttaagttttgcctggaaaagcttgtgat
gacgtcatcaaaattttcaattttcaaatttttttgcccagccacctgat
gacgtcatctggcaggtagCCATGTGGCAAAATttagtgttactgtttaa
aattaagtttcagaccctctaaggatcatctgtgccaaatttcatgcttt
taccaccatctgaagtattcttacgttctTATGTGCTAACATACCTCACT
ATAAAGGGTCCGATTCTAAAGGCCTAATTTAACAAttcgaccaaaacttg
taacaagcaTACACGCGTTTTTACAAGAATAATTTTACAACAACgcgagg
ctgaaaattggtcaaaacaacaaattaagaacCAGAgcttcagatttcag
aaattacttattttaacagattttaatagattttaaataAAGGAATTAAG
CGTATTGAGAACATCGTAGGAACAGataagcctgaaaatttcaagaagtt
aagaacagcccagcctgagtcaaattttactggttctaataaaaaagcgC
GTACATTCGAACGATCGAATGTTGAAAAAGTCGAACTTTCACTTTAAAAG
TATACAAAAAGTGTATCAAGTGTATCAAGATGTAACATTTCGACCAAAAC
CTTTAACAAGTATACTCGAACGATCGAACGTTGAGAAAGTCGAGCTTTCA
CTTTAAAAGTATACAACAAGGCGTATCAAGCGGCATCAAGATTTTCATTC
TGTTTGATGAAAACTTTGTGGTAAACGATCAATGAAGGTCAATGTTTCAA
ATATTAGCCGACTCCAAAAACGCCAGTTTCCGAGAATGCACCAAAAACCC
ATCCACTGATAACAACAACTACAGATCAAGTATCACTCGATTTCTTTCGA
AATGCGATGGCAACGATATTTTTGGATAAATCTCTATTGGGAGCATTACG
TAGTCCTTCAGCGACATGACGTAATTGAACATTGACTTCAGGAGACATGT
TTTCACCCTCTTTCTCGAGCGTGCTTGCAAGGGCGTTCAGTAATTCGTGA
AAGCCGTACACAATTCCAGCTCGTCGTACTTTGTTCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029092-exon-sc0000724-1491911889:163417..164115 | TCONS_00029092-exon-sc0000724-1491911889:163417..164115 | Clytia hemisphaerica | exon |
| TCONS_00029092-exon-sc0000724-1510915933:163417..164115 | TCONS_00029092-exon-sc0000724-1510915933:163417..164115 | Clytia hemisphaerica | exon |
| TCONS_00029092-exon-sc0000724-1575043694:163417..164115 | TCONS_00029092-exon-sc0000724-1575043694:163417..164115 | Clytia hemisphaerica | exon |
| TCONS_00029092-exon-sc0000724-1491911889:164226..164604 | TCONS_00029092-exon-sc0000724-1491911889:164226..164604 | Clytia hemisphaerica | exon |
| TCONS_00029092-exon-sc0000724-1510915933:164226..164604 | TCONS_00029092-exon-sc0000724-1510915933:164226..164604 | Clytia hemisphaerica | exon |
| TCONS_00029092-exon-sc0000724-1575043694:164226..164604 | TCONS_00029092-exon-sc0000724-1575043694:164226..164604 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000724 | supercontig | sc0000724:163417..164604 + |
Blast
The following BLAST results are available for this feature:
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