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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029096 ID=TCONS_00029096|Name=TCONS_00029096|organism=Clytia hemisphaerica|type=transcript|length=2367bp
ATGTGACAATTCTAACCTGGTTCTTCAGCCAAAACATCTAAACCGTGTTG
CTTTTtacctaaaaaagaaaagaaaacagtgAGGTTCTAATGTTCACGTT
GAAGATTGACGTTTGTTTGGGATAActgttttgctttagccaatcacaGT
GCTCGAAACCCATGATAATTTTTCATCCTTAATCtggatgaaaaatatca
aagcgGTCCACCAAACTGGGTANATGATAATTTTCATCCTTAATCtggat
gaaaaatatcaaatcggTCCACCAAACCTGGGTGGATTCTCTTACCAGGC
CATTTCCAGAGTACATAAGTGCCATGCGCGGAGTATCCGAATCAGGTAGG
AGGTCAATATTTTCCCGTTATCTGTCAAGATTTACAAGTGCTGTGAAATT
CTGACCAGtagtttattttgtattttacagacctacTGTAAGCAGAACTG
GGAAGAATGATACCTGTTTTGGTTAACATGTTTTTAAAGTGACAAGTACC
CAATAAATTCTCCTGCCAAAACTCTATTATTGAAGTTCTTTCTTTCTCTA
TTTTCAGGATTCTGGAATAAGGTAATCAGTGTTTTCTTTTGTTGCATGAT
GCATCACAATAGTGCTTTTTGATCCTTAGATTCTCTGCTGAACAACTCCA
TCCTATAATACGATTATTTGACTAATTTTACCATGCGACGATATTTTGGT
TCGAATCTCCTATAATTCCTAATTATGGAATAAGGGTAACACTCTACCCC
ATTTGCAACTCCTTTCACCGGAAAAGTAAAACGTGATAAAACATTATGCA
AAACATCAATTGTTTCATATAGATAAAACGATCATTTCATATATAGCTCC
AGTGAAGAAGTTCAACACCCCACAGCAGCTCCTTTGAAATCCAACCCTCT
TCCACAAGCAAACAATATTGCCAACAGAGTATGTCACCCCCATCCATCCC
ATCAAAACACGTCCAACTGGCCCAAATTGCGACTGGACACGGTAGAGTCA
CCTTTTAAAGAAGCTGCAAACTTTCTTTTCCCGCCATCGAACCCATCGTC
TGCTCTACTAAACGGAAATCAGTATAAAGATGTGACGACATCACGTCTGG
AACACGACACTGGCACCTCCACAAAGACGCCATCTGATTACGACGAAATG
GATCCAGATTGGAGCAACATTGATGAAAGTATTGAAGGTGAAACGGAAGT
TTTACAACATTTAAACATACATAAAAAAGTGGAGCCGACAGAATCCACCC
TCCCGTTATCTGGTTATGATCGCATCGACATCGACCTTAACGAGGATTCA
GGGCTGAGTCGAACGAACAGTGACTCTTCAACCGTGGACGCGCCTCCTCT
CCCTCCACGCATCAAGGGATGGCAATGCAAACGAGAGCGCAAAACTGAAA
TCGGTTTCGAAGGTCCTCGATTCTCTTTATTCCCAAGTGTAGATCACCTT
GACAACGCACGATGTGACGACGAAGAAGAGTTCTGCAGCCGTAACTTTGT
ACCCGGCGACCATAACAACAATCCAACTAAAGTTAATACcagtgaaaaaa
acaaaatcaaattcaaactaTCCGTCACTCGCGTGCATTCACGTTCGTTG
GATAGTATCCATGATACGTTCTTAAATGCTAACGTCTCACGTTTGTTTAA
CGAAAACACAATTGAAGAGATTTTCCCGAAAATTGTGCAGcaaaaaaaag
acaaaggaaCTTGAAAGAGAAGTTTATATGACCACCTTTGTTtcgtgttt
caaaaaaaaattgaaggaaatTATACACTTCATTTGCCTTCCAAATGTTC
CTCTCTGTCTTTCGAACACACCACACAAATCCAACACCTCAGTGATTTGA
TGAGGTATAATAAATAGAATTATCAAAGTATGGCGACGAAAAACCAATAG
TTATCCGCGCAGGGCACGCACAAAGATTTACAAATTGGATGGACCGAAAT
ATTGTTATTTAGGGGATAAATCCATGGTTTTCACAGATGGGCAAAATATG
ACTCCTCCTCGGTAACGCCCTCCCGAAGTCGACCGAACGATCAGACAGAA
GCTTAATCTTGGACAAACTTCAGTTAGCTTAATGGTCCCCTTTTTTGTTC
CTGGTATTCCTTCgacattttcagaatttgtgaATAGCGTATAATTTTCC
TCTTCCAATTTATAGAAATAGAATTTTTaatgtataataatatttttgag
aTGTAAATGTACTTTTTTCGTTACCGAGGGAAAACGATTTTCTTGTGTGT
TTTCAAGTCTTATTTTTCATATATTCATTGATTCTTTGCCGCACCCCATG
gcttatttttctttaacccaAAAGAAGCAATTGTAATGTTAAAACTTTGT
CTAAAGGTCTAATGGCG Run BLAST on NCBI transcript from alignment at sc0000724:88524..91737- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029096 ID=TCONS_00029096|Name=TCONS_00029096|organism=Clytia hemisphaerica|type=transcript|length=3214bp|location=Sequence derived from alignment at sc0000724:88524..91737- (Clytia hemisphaerica)
ATGTGACAATTCTAACCTGGTTCTTCAGCCAAAACATCTAAACCGTGTTG
CTTTTTACCTAAAAAAGAAAAGAAAACAGTGAGGTTCTAATGTTCACGTT
GAAGATTGACGTTTGTTTGGGATAACTGTTTTGCTTTAGCCAATCACAGT
GCTCGAAACCCATGATAATTTTTCATCCTTAATCTGGATGAAAAATATCA
AAGCGGTCCACCAAACTGGGTANATGATAATTTTCATCCTTAATCTGGAT
GAAAAATATCAAATCGGTCCACCAAACCTGGGTGGATTCTCTTACCAGGC
CATTTCCAGAGTACATAAGTGCCATGCGCGGAGTATCCGAATCAGGTAGG
AGGTCAATATTTTCCCGTTATCTGTCAAGATTTACAAGTGCTGTGAAATT
CTGACCAGTAGTTTATTTTGTATTTTACAGACCTACTGTAAGCAGAACTG
GGAAGAATGATACCTGTTTTGGTTAACATGTTTTTAAAGTGACAAGTACC
CAATAAATTCTCCTGCCAAAACTCTATTATTGAAGTTCTTTCTTTCTCTA
TTTTCAGGATTCTGGAATAAGGTAATCAGTGTTTTCTTTTGTTGCATGAT
GCATCACAATAGTGCTTTTTGATCCTTAGATTCTCTGCTGAACAACTCCA
TCCTATAATACGATTATTTGACTAATTTTACCATGCGACGATATTTTGGT
TCGAATCTCCTATAATTCCTAATTATGGAATAAGGGTAACACTCTACCCC
ATTTGCAACTCCTTTCACCGGAAAAGTAAAACGTGATAAAACATTATGCA
AAACATCAATTGTTTCATATAGATAAAACGATCATTTCATATATAGCTCC
AGTGAAGAAGTTCAACACCCCACAGCAGCTCCTTTGAAATCCAACCCTCT
TCCACAAGCAAACAATATTGCCAACAGAGTATGTCACCCCCATCCATCCC
ATCAAAACACGTCCAACTGGCCCAAATTGCGACTGGACACGGTAGAGTCA
CCTTTTAAAGAAGCTGCAAACTTTCTTTTCCCGCCATCGAACCCATCGTC
TGCTCTACTAAACGGAAATCAGTATAAAGATGTGACGACATCACGTCTGG
AACACGACACTGGCACCTCCACAAAGACGCCATCTGATTACGACGAAATG
GATCCAGATTGGAGCAACATTGATGAAAGTATTGAAGGTGAAACGGAAGT
TTTACAACATTTAAACATACATAAAAAAGTGGAGCCGACAGAATCCACCC
TCCCGTTATCTGGTTATGATCGCATCGACATCGACCTTAACGAGGATTCA
GGTCAGTAAACTCTTGCAAGTTGAAATCTGTGTGTTAACGTGTCGCCCAT
TTATATAGCTTTCCTAGAAAACATCGTCAATAGTCTCGATTTCTATTTTT
GATTGATGAGGAGACAAGGATATGTTTCTAATGTTTTGTGTTCAGTTATT
AAAAAATAAATTAAAAGTGTCCATTTTGGGGATTCCAGTCGCCAAAGCTT
GAAAAAAAATCTAAATTCCTTGAAATATTGCCATTTTGAATTTATGTATT
GTTTGTGATTGATGTTGCAGAGTGCTCAATGAAAACCAGAGCCAAGTAAA
ATATTAAAAGATATCTTTCATCACATTTTAAATTTACGAATTTAGACTTT
CTGAAAAAATAAAAGATTTCATTGATAACCTATTTTAAGACTGAAATCCG
TCTGTTGAAATGCTTGTAAACGGCTGAAATTGGAGGTTTTATTGGACCCC
CGCTGAGTAGAAGTTGGATTTCAAAGACAATAAAGTGCAAAAATATTTGA
TAAAAAATAATTCTCACAATTCTCGCCCGAACTTTAAATTCTGAAAAGCG
GTAAGTCATATAGCTTAGCTTTTTCTCGGCTGTAAACGAGATTGATTCAC
TTCCTTTAGTAGCGTGCTGAATATAATGCCTGTAGCCTCTAACGGTAAAA
TTACCTCGTTTTTTTGGTAAGCTGAGATTGTTACAGCCGTTCAAACTTCC
CAATAAAAAGATGACTATGTGGCAACTAAAACTTAATATTTTTATCAGTG
CTTAAAACTTAAAATTAAGATCTATTTCAGGTCCTATTTGATTTGTTTTG
CTTTAATCGATTAAATCTAAAGAATATTCCATACATTTCCTTCAGTAGGG
CTGAGTCGAACGAACAGTGACTCTTCAACCGTGGACGCGCCTCCTCTCCC
TCCACGCATCAAGGGATGGCAATGCAAACGAGAGCGCAAAACTGAAATCG
GTTTCGAAGGTCCTCGATTCTCTTTATTCCCAAGTGTAGATCACCTTGAC
AACGCACGATGTGACGACGAAGAAGAGTTCTGCAGCCGTAACTTTGTACC
CGGCGACCATAACAACAATCCAACTAAAGTTAATACCAGTGAAAAAAACA
AAATCAAATTCAAACTATCCGTCACTCGCGTGCATTCACGTTCGTTGGAT
AGTATCCATGATACGTTCTTAAATGCTAACGTCTCACGTTTGTTTAACGA
AAACACAATTGAAGAGATTTTCCCGAAAATTGTGCAGCAAAAAAAAGACA
AAGGAACTTGAAAGAGAAGTTTATATGACCACCTTTGTTTCGTGTTTCAA
AAAAAAATTGAAGGAAATTATACACTTCATTTGCCTTCCAAATGTTCCTC
TCTGTCTTTCGAACACACCACACAAATCCAACACCTCAGTGATTTGATGA
GGTATAATAAATAGAATTATCAAAGTATGGCGACGAAAAACCAATAGTTA
TCCGCGCAGGGCACGCACAAAGATTTACAAATTGGATGGACCGAAATATT
GTTATTTAGGGGATAAATCCATGGTTTTCACAGATGGGCAAAATATGACT
CCTCCTCGGTAACGCCCTCCCGAAGTCGACCGAACGATCAGACAGAAGCT
TAATCTTGGACAAACTTCAGTTAGCTTAATGGTCCCCTTTTTTGTTCCTG
GTATTCCTTCGACATTTTCAGAATTTGTGAATAGCGTATAATTTTCCTCT
TCCAATTTATAGAAATAGAATTTTTAATGTATAATAATATTTTTGAGATG
TAAATGTACTTTTTTCGTTACCGAGGGAAAACGATTTTCTTGTGTGTTTT
CAAGTCTTATTTTTCATATATTCATTGATTCTTTGCCGCACCCCATGGCT
TATTTTTCTTTAACCCAAAAGAAGCAATTGTAATGTTAAAACTTTGTCTA
AAGGTCTAATGGCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029096-exon-sc0000724-1575043694:90437..91737 | TCONS_00029096-exon-sc0000724-1575043694:90437..91737 | Clytia hemisphaerica | exon |
| TCONS_00029096-exon-sc0000724-1575043694:88524..89589 | TCONS_00029096-exon-sc0000724-1575043694:88524..89589 | Clytia hemisphaerica | exon |
| TCONS_00029096-exon-sc0000724-1510915933:90437..91737 | TCONS_00029096-exon-sc0000724-1510915933:90437..91737 | Clytia hemisphaerica | exon |
| TCONS_00029096-exon-sc0000724-1510915933:88524..89589 | TCONS_00029096-exon-sc0000724-1510915933:88524..89589 | Clytia hemisphaerica | exon |
| TCONS_00029096-exon-sc0000724-1491911889:90437..91737 | TCONS_00029096-exon-sc0000724-1491911889:90437..91737 | Clytia hemisphaerica | exon |
| TCONS_00029096-exon-sc0000724-1491911889:88524..89589 | TCONS_00029096-exon-sc0000724-1491911889:88524..89589 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000724 | supercontig | sc0000724:88524..91737 - |
Blast
The following BLAST results are available for this feature:
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