TCONS_00029186 (transcript) - C. hemisphaerica

Overview
NameTCONS_00029186
Unique NameTCONS_00029186
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length101

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00029186 ID=TCONS_00029186|Name=TCONS_00029186|organism=Clytia hemisphaerica|type=transcript|length=101bp
AGCAGACATAGtcatagaaaattttttcatttttttaatcatttgttTCA
ACTTTTATCTGCTTTTATCTCAACTTTCCTGCAGGTTGATTCTTCTCTCA
G
Run BLAST on NCBI

transcript from alignment at sc0000727:52658..52758

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00029186 ID=TCONS_00029186|Name=TCONS_00029186|organism=Clytia hemisphaerica|type=transcript|length=101bp|location=Sequence derived from alignment at sc0000727:52658..52758 (Clytia hemisphaerica)
CTGAGAGAAGAATCAACCTGCAGGAAAGTTGAGATAAAAGCAGATAAAAG
TTGAaacaaatgattaaaaaaatgaaaaaattttctatgaCTATGTCTGC
T
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016607XLOC_016607Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029186-exon-sc0000727-1491911889:52658..52758TCONS_00029186-exon-sc0000727-1491911889:52658..52758Clytia hemisphaericaexon
TCONS_00029186-exon-sc0000727-1510915933:52658..52758TCONS_00029186-exon-sc0000727-1510915933:52658..52758Clytia hemisphaericaexon
TCONS_00029186-exon-sc0000727-1575043694:52658..52758TCONS_00029186-exon-sc0000727-1575043694:52658..52758Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000727supercontigsc0000727:52658..52758 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00029186 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top