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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029207 ID=TCONS_00029207|Name=TCONS_00029207|organism=Clytia hemisphaerica|type=transcript|length=3081bp
CGAGAAATATAACCGGATATAAAGGTTTTAGTTATAAAAATGTATGTACT
TAAGCTGTCTGACATGCCTGGAAAATCAGTTAGAGGAGACACTCGAATCT
CTTTTTGGGGCAATGGGtttatattttattacaaagtgcgtcagTCTTTG
GTATTACAAAGGGTAGCAGGTATTGCAACTGTGGcatttattacaaagtg
tgttaTCAAAGGGGCCAAAAAAATTACCCAACATTACTGGCCGACagaca
aaattttggaatcTTTACCCTTAGTTTACCACCTTAAACGGCATAAAGAA
tatttaagtaaaaaaaaaactttgcaagAATATGAAAAGAGATTTGGACT
CGCATGAATTACTCTCCCCCCTTAGATTCAAAATTGCTTTTTTCTGGTCC
CCTTTGGTCCTCTGAATTTTCCCCTCGTTTCTGAAAATCTCAAATTTTCT
CTTAAAGTTTTGCCCAAAATTCAAGTCCCCCTTAaggggggctgaaacca
tgaatCCACTGCAAGATAGTAGGCCCAATCTCGAACTCCTTAGGATAATC
AATATCCAATACGTAACATACAGCAAGGTAGCAGCTTAATGCTTCAATTA
ACGACATTGTCTTAAAGACGACCGACTTCTTCACGAGCAACGCTGTCATC
TGGGTATCTTTTAGTGACACAGGGATGCTTGTGATAACTTTATTCATTTT
AGATTCCGGCTCCTCTTGTTCctgaaattgattgaaaaattgagataaaa
gcaaaattttgaacaaatttcggAATCCTTGTACTTATTCAGAAGCTCCA
TTTTTGCCACAGACCTGCATGTAATTAAGCGTTTCCATCGTCGTTCGTGC
TAGATTTGACTTCGGGGCATCTGCTCAGAATGTGTCCGACAGTCTCTTGA
ACTGTTTGACAATGTCTACATTTCTTCAGCTTCTCTATCTCTATTACAGT
TCTTAAGGGTAGGAAGTTTGTTGATTCGGAGCTGGATCATACGTATGTAG
CTTCTGCCAGAGATATGTCGCGCAACTCATTGTAGCGAGGAGCTACCTTT
GAGATTCCTGACGAGTTCTCTCAAGTGGTTACCATCGATGGAGTCGTAGA
GGTTGCCGGTTCGTTGACGAACGGAGTAGTTGAGAGCGTCGTTCACGGTG
TTTCTCGATCATATTGTACAGTCTTTGTCTTTAGGTCGCGGATGGCTGCG
GAGTTGCCAAGGTCTCGAATGGCTGCGTCGGTCGATTTGCTGAGATTGCG
TATGCGTTTCAGAGTTAAGCGAGGGATCGTTTCTTCGAGCTTGGCAAGAC
GGAGGCCTCTAGCCGCAACGGGCGCATGGAAGTAGGACGTTGGCGTATCG
TTCGGTAGTCGTGCGATCTCGCGGATGGTCTTCCGTCTCATTATGTCGAA
GGACTGCATTAGTCCTTTGGTAACTCGTCCGAGAACAAGCTGGTAGGTGA
ATTTGGGGATTCCATTGTCGCGAAGCAAAATCAACTTTTGCTGGGGTTTT
AGAGGGGAGCTCTTAACCCGTCACATCAAGGCTTGAAATTCAGTCAGCGA
AGATCTCATTTTTCCCTGTGGGTCGTAATTAATACCCAGATATTTGTATG
GTGAGTCATAGGTGTTGAAGGGGATGGGGTCGCTCTGTGCAGTCTCCCCC
TAAGAGGGGTGACCAAACGAAGATCTGAGTTTTGCTTTCCAtgtttggac
ctaccgggaggtcctttaatttgaccattgtccgttcgtctgttacaagc
ttttctcgggattggctcattagttttattttattttttgcacaatgata
caaaatagcaatgcctgaaaagtgacggagcccgatttttgataaaaaat
tttggggggcaaatttgggccaaaaactacctaaaaatagggttttttgg
actttgtgcaaaattgcttcgttagtttttcctgatttttggcagaaaga
tagagtgcaaggtaccctaaaatgtggctgaagtaatttttctcggaaaa
ttttttttcgtcgtcaaatacggattttcgcaaatttgggccaaaaacta
cctaaaaataaggttttttggactttgtgcaaaattgcttcgttagtttt
tcctgaattttggcagaaagatagagtgtaaggtaccctaaaatgtggct
gaaataatttttctcggaaaattttttttcgtcgtcaaatacggattttc
gcaaatttgggccaaaaactacctaaaaataaggttttttggactttgtg
caatgttgcttcattagtttttcctgatttttggcagaaagatagagtgt
aaggtaccctaaaatgtggctgaagtaatttttctcggaaaatttttttt
cgtcgtaaaatacagATTTTCGTTtcgtggggaaattcccttttaccatt
ttcctgttagaggcttttctcgggatcggcccattagttttttggaccta
cctggaggtcctttCTCATTAGATCCCAGGGTCTTCTCTTTTTAAATGCA
GTTGTGCTGCTTAACGAAGCACATTATTTTCTTGAGCATATAGATAGGAT
GCGTATTGCATCGACGGCAAatcgtcaaaaattgaaaataacccagcttt
cataaaaaaaaacctataaATAAGAttaagaaatatttaatattgACAAA
AGTATGGTGTGAAAATCGAactggaaaaaaaacaaaaaacaatcgcCAGC
TCAAGATTAAATTCGAGGGCAAGTAAATAAAGATTTGTTGATTACCGTTT
GAATAACAATATTCGTTGGATGCAAACTTCGAATCTTTCCATCAACGAGA
AATTCGAGGCCTGCCAGAATCTCAGCAAGTTGATGTGGATCAATGACTTG
ATGTGGGCTGAATGAGTAGGTTGTCGAttcatcatcaatttttctttggt
AACTCCATCAAACATTATCGATTCATCATCAATTCTTCTTTGGTAACTCC
ATCAAACCAGATGATCAGATACATTCGATCATCACGAAAGTGTATAGGAT
GTGTTCCCAAATCGATGCCCGAATGATTTGCTAGATATCCATTGAATAGA
CAAGAAAACTTCTCCCGAAACTTTTCGCGTT Run BLAST on NCBI transcript from alignment at sc0000728:83128..86208 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029207 ID=TCONS_00029207|Name=TCONS_00029207|organism=Clytia hemisphaerica|type=transcript|length=3081bp|location=Sequence derived from alignment at sc0000728:83128..86208 (Clytia hemisphaerica)
AACGCGAAAAGTTTCGGGAGAAGTTTTCTTGTCTATTCAATGGATATCTA
GCAAATCATTCGGGCATCGATTTGGGAACACATCCTATACACTTTCGTGA
TGATCGAATGTATCTGATCATCTGGTTTGATGGAGTTACCAAAGAAGAAT
TGATGATGAATCGATAATGTTTGATGGAGTTaccaaagaaaaattgatga
tgaaTCGACAACCTACTCATTCAGCCCACATCAAGTCATTGATCCACATC
AACTTGCTGAGATTCTGGCAGGCCTCGAATTTCTCGTTGATGGAAAGATT
CGAAGTTTGCATCCAACGAATATTGTTATTCAAACGGTAATCAACAAATC
TTTATTTACTTGCCCTCGAATTTAATCTTGAGCTGgcgattgttttttgt
tttttttccagtTCGATTTTCACACCATACTTTTGTcaatattaaatatt
tcttaaTCTTATttataggtttttttttatgaaagctgggttattttcaa
tttttgacgatTTGCCGTCGATGCAATACGCATCCTATCTATATGCTCAA
GAAAATAATGTGCTTCGTTAAGCAGCACAACTGCATTTAAAAAGAGAAGA
CCCTGGGATCTAATGAGaaaggacctccaggtaggtccaaaaaactaatg
ggccgatcccgagaaaagcctctaacaggaaaatggtaaaagggaatttc
cccacgaAACGAAAATctgtattttacgacgaaaaaaaattttccgagaa
aaattacttcagccacattttagggtaccttacactctatctttctgcca
aaaatcaggaaaaactaatgaagcaacattgcacaaagtccaaaaaacct
tatttttaggtagtttttggcccaaatttgcgaaaatccgtatttgacga
cgaaaaaaaattttccgagaaaaattatttcagccacattttagggtacc
ttacactctatctttctgccaaaattcaggaaaaactaacgaagcaattt
tgcacaaagtccaaaaaaccttatttttaggtagtttttggcccaaattt
gcgaaaatccgtatttgacgacgaaaaaaaattttccgagaaaaattact
tcagccacattttagggtaccttgcactctatctttctgccaaaaatcag
gaaaaactaacgaagcaattttgcacaaagtccaaaaaaccctattttta
ggtagtttttggcccaaatttgccccccaaaattttttatcaaaaatcgg
gctccgtcacttttcaggcattgctattttgtatcattgtgcaaaaaata
aaataaaactaatgagccaatcccgagaaaagcttgtaacagacgaacgg
acaatggtcaaattaaaggacctcccggtaggtccaaacaTGGAAAGCAA
AACTCAGATCTTCGTTTGGTCACCCCTCTTAGGGGGAGACTGCACAGAGC
GACCCCATCCCCTTCAACACCTATGACTCACCATACAAATATCTGGGTAT
TAATTACGACCCACAGGGAAAAATGAGATCTTCGCTGACTGAATTTCAAG
CCTTGATGTGACGGGTTAAGAGCTCCCCTCTAAAACCCCAGCAAAAGTTG
ATTTTGCTTCGCGACAATGGAATCCCCAAATTCACCTACCAGCTTGTTCT
CGGACGAGTTACCAAAGGACTAATGCAGTCCTTCGACATAATGAGACGGA
AGACCATCCGCGAGATCGCACGACTACCGAACGATACGCCAACGTCCTAC
TTCCATGCGCCCGTTGCGGCTAGAGGCCTCCGTCTTGCCAAGCTCGAAGA
AACGATCCCTCGCTTAACTCTGAAACGCATACGCAATCTCAGCAAATCGA
CCGACGCAGCCATTCGAGACCTTGGCAACTCCGCAGCCATCCGCGACCTA
AAGACAAAGACTGTACAATATGATCGAGAAACACCGTGAACGACGCTCTC
AACTACTCCGTTCGTCAACGAACCGGCAACCTCTACGACTCCATCGATGG
TAACCACTTGAGAGAACTCGTCAGGAATCTCAAAGGTAGCTCCTCGCTAC
AATGAGTTGCGCGACATATCTCTGGCAGAAGCTACATACGTATGATCCAG
CTCCGAATCAACAAACTTCCTACCCTTAAGAACTGTAATAGAGATAGAGA
AGCTGAAGAAATGTAGACATTGTCAAACAGTTCAAGAGACTGTCGGACAC
ATTCTGAGCAGATGCCCCGAAGTCAAATCTAGCACGAACGACGATGGAAA
CGCTTAATTACATGCAGGTCTGTGGCAAAAATGGAGCTTCTGAATAAGTA
CAAGGATTccgaaatttgttcaaaattttgcttttatctcaatttttcaa
tcaatttcagGAACAAGAGGAGCCGGAATCTAAAATGAATAAAGTTATCA
CAAGCATCCCTGTGTCACTAAAAGATACCCAGATGACAGCGTTGCTCGTG
AAGAAGTCGGTCGTCTTTAAGACAATGTCGTTAATTGAAGCATTAAGCTG
CTACCTTGCTGTATGTTACGTATTGGATATTGATTATCCTAAGGAGTTCG
AGATTGGGCCTACTATCTTGCAGTGGattcatggtttcagcccccctTAA
GGGGGACTTGAATTTTGGGCAAAACTTTAAGAGAAAATTTGAGATTTTCA
GAAACGAGGGGAAAATTCAGAGGACCAAAGGGGACCAGAAAAAAGCAATT
TTGAATCTAAGGGGGGAGAGTAATTCATGCGAGTCCAAATCTCTTTTCAT
ATTcttgcaaagttttttttttacttaaataTTCTTTATGCCGTTTAAGG
TGGTAAACTAAGGGTAAAgattccaaaattttgtctGTCGGCCAGTAATG
TTGGGTAATTTTTTTGGCCCCTTTGAtaacacactttgtaataaatgCCA
CAGTTGCAATACCTGCTACCCTTTGTAATACCAAAGActgacgcactttg
taataaaatataaaCCCATTGCCCCAAAAAGAGATTCGAGTGTCTCCTCT
AACTGATTTTCCAGGCATGTCAGACAGCTTAAGTACATACATTTTTATAA
CTAAAACCTTTATATCCGGTTATATTTCTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029207-exon-sc0000728-1491911889:83128..86208 | TCONS_00029207-exon-sc0000728-1491911889:83128..86208 | Clytia hemisphaerica | exon |
| TCONS_00029207-exon-sc0000728-1510915933:83128..86208 | TCONS_00029207-exon-sc0000728-1510915933:83128..86208 | Clytia hemisphaerica | exon |
| TCONS_00029207-exon-sc0000728-1575043694:83128..86208 | TCONS_00029207-exon-sc0000728-1575043694:83128..86208 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000728 | supercontig | sc0000728:83128..86208 . |
Blast
The following BLAST results are available for this feature:
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