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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029210 ID=TCONS_00029210|Name=TCONS_00029210|organism=Clytia hemisphaerica|type=transcript|length=2844bp
CTTTGAATAGTTaaagcttttgacatgaaatttaAGTTTTAATTTTGTTG
ACTTTCTTACTTATGTATTGTGGATTTTTTGAAGGCACGAATAATCCCAC
CATACTTTCATCATGATTAAGGAGAGTCTCGATTGAATTGTGTGCCGACA
TGCAGTATTGTTATTTGTCATGGTGGAGTTGAGACCTTCTCTGGGTTTTT
CTTAAAGCCTACTTGTGAATGCAAAGATCCAGTTTTTGTTGACCAAGATG
ATGGTTATAAAGGTCATTAACGAATTTTCTTATGAGCTGGGCAAATAGAG
AATGACAGTCTTAGACTGGTGTTGGAAAGATACCATACTCCGACATATAT
GCTGAGCTTTGAAATGATATGCTTCTTGGTCACTGTTATTGTCCAGTTTT
GTGAATAGGGCATCTTCTCTTGGAAACAAAGCAAATCCGGATGGACTAGA
ATTCTAAACCAGAGAAAGATTCACTCTGTGGTGACAAATTAGTGTAATCA
CTTTGATTCTTTGTCCGAATTTTCGAAATGGGTGTCCGAAGAACGTAATG
ATCTGTCGTGGAGTTCTCTTAGTGGTCCTTTAGTGTATACACGTCTGTTT
ATAaggacatccaaaatttttgaagcttgctcttaactttttgagtttta
agtctaaaaacgTTCTAAAAGTTCTcttattttttaccattttgtgagta
tttttgtcaatttaacATTTTGGAAGTTAACGTGGTCTGCCACACCATCG
AGAGGACCCTTTCATCAGCATCTAAGAATCGCAAAAATCAGAGTTTTCTT
ATTATAATTGCTCTCTATACTTTCGTTTTCCGCTCTGTCGATTGTCCGCA
CTATATGATTTTCCCACACTGAGCTAATGAGATGACCTTCCTCTTCTATG
TCTAGTCTGATTCATATTTGCCATATTAATAGCAAGAGACTTCTAACCAA
CTTGGGATTTCATGGCCAAGCCAAGTGTCAAAGGAATGGTACTCCTCGGC
TTTTTAACTACAAACTTCCCGTAATCCAATGTGATAAATTTTACCATTGA
AAGAAACTTCAACCAACTTGGGATTTCGGTTAGAAAAAtgtgttatgttt
tattttgaattggCTACACATCACACGGTTTTTAATTTCCCCTATATAAT
GCTGCAAAGTTTCCCCTATATAATACTGCAGTAAGCGCAAACTTGGATCA
AGCCATCCTATCTCCAAGTTGACTGACTGCTTGGGCCATTGGTTGAATTG
ATATCTATTTGATATTACCACATACCTTTCAACATGGAATCCAACTCTAA
AACTATTAAATTGGAAGAATTCAGCCTCTGAAGGTTGATTTTCGAACTTT
AGCTCGGCACGAGCTTTTTATGCAATAACTATTTTATTATAAACAAAGTA
TTCCAACCTTCGTCTAGTCTCTTCTTCTCTTCTTTTTCATCCTTATATTC
TCTTTTTGCCGCCATGCGAGATGCTATCTTCTTTTTTGGATCTACCCCGG
Tgaaggtcctatgaattaaccgttcgttcgttcgttcgttcgttcgttcg
ttcgttcgttcgtggctcattcaatttttccgaTATTTAGCACAAAGAAT
CAAAATGGTAAagcctcgaatgtgacggagcccgactttcaagaagaaaa
atttttgcgtcaatttgggccaaaatatgtccaaaaatgaggttttttga
gGTTTCCTCAATTTGGTCAAAAATATGCCCAAGAATGAGCTTTTTTGAGA
TTTCCTCGAGTTTGAATCATTAAAATGTTTCTGATGTTTTGCATAAAGAC
AGATCACTATCACTAAAATGAATTTCTAGCTATAAGAGTAAGTAAGtaaa
gtatattcatctggtggctgtcggcggagccgggagtgagggagtctatc
cccttttctatttgcgctagacctgggtgATCgtatgctgaggtggagcg
ccacacctactctcagctcccagtaacttaccgcctagatcagattaccc
aatctaagctactcatccgctgagttggcggtgaccggggatcgaaccca
caacgcttagattgtaaggcgaatgctataccgactgagctacccggcca
ctaataagaatcactattttatatgcatagatcaatgttcttaccTAAAT
CACTCATTTTCTACATGACAtagattttttttgctattaaATTTGTACCT
TTACAGAAGATTGGGGTTtaggtttgaaattttgagttgctaaaatgttt
tttataagaactgggcCAAATTGttaatttatttataagcacattagaAA
AAAACATGAAGAGTCTGAAGAGGCTTGGCCTGAAGAGCTTATTGTCATAT
TCCGCTTAAATACAGTTTTTGCTTGGATGAATTTCTACAATTCTACTTTT
CATTAATtggaaattattatttttataaaactttttgataagCACATGCC
TGGAAATGATCTTTTTTCTCCTGATTGGCTCGGTTAATTTTTCTGATACT
TTACACAGAGATGTAAAATTGTCTCTTGCTTGAACTGCATCCTCAACGTT
ATGCAGACGAGTTCATCGACCTTGAAGTTAGTTAAAAGAAACTTTGATTT
GGCCTTGAGAAGATTTTCGAAAAGTTTATTAAATTTGGGTAAAGTAATTT
GATCTCAAGGTCGATAGTCTCGTAAGATTTCTTTCCATCACAACGCTATC
TTACCTGCCATGTATCTCGCTGCCATATGGTCTTACCCACAACAAGGGAT
AATGATCATTTTCGGTCGAAGTACGCTCTTTCAGCGATTATCTATCCCTT
AGACTCGAGCTTTtcattagactggagtcgtttataatgcgtgt Run BLAST on NCBI transcript from alignment at sc0000728:91422..94265 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029210 ID=TCONS_00029210|Name=TCONS_00029210|organism=Clytia hemisphaerica|type=transcript|length=2844bp|location=Sequence derived from alignment at sc0000728:91422..94265 (Clytia hemisphaerica)
acacgcattataaacgactccagtctaatgaAAAGCTCGAGTCTAAGGGA
TAGATAATCGCTGAAAGAGCGTACTTCGACCGAAAATGATCATTATCCCT
TGTTGTGGGTAAGACCATATGGCAGCGAGATACATGGCAGGTAAGATAGC
GTTGTGATGGAAAGAAATCTTACGAGACTATCGACCTTGAGATCAAATTA
CTTTACCCAAATTTAATAAACTTTTCGAAAATCTTCTCAAGGCCAAATCA
AAGTTTCTTTTAACTAACTTCAAGGTCGATGAACTCGTCTGCATAACGTT
GAGGATGCAGTTCAAGCAAGAGACAATTTTACATCTCTGTGTAAAGTATC
AGAAAAATTAACCGAGCCAATCAGGAGAAAAAAGATCATTTCCAGGCATG
TGcttatcaaaaagttttataaaaataataatttccaATTAATGAAAAGT
AGAATTGTAGAAATTCATCCAAGCAAAAACTGTATTTAAGCGGAATATGA
CAATAAGCTCTTCAGGCCAAGCCTCTTCAGACTCTTCATGTTTTTTtcta
atgtgcttataaataaattaaCAATTTGgcccagttcttataaaaaacat
tttagcaactcaaaatttcaaacctaAACCCCAATCTTCTGTAAAGGTAC
AAATttaatagcaaaaaaaatctaTGTCATGTAGAAAATGAGTGATTTAg
gtaagaacattgatctatgcatataaaatagtgattcttattagtggccg
ggtagctcagtcggtatagcattcgccttacaatctaagcgttgtgggtt
cgatccccggtcaccgccaactcagcggatgagtagcttagattgggtaa
tctgatctaggcggtaagttactgggagctgagagtaggtgtggcgctcc
acctcagcatacGATcacccaggtctagcgcaaatagaaaaggggataga
ctccctcactcccggctccgccgacagccaccagatgaatatactttaCT
TACTTACTCTTATAGCTAGAAATTCATTTTAGTGATAGTGATCTGTCTTT
ATGCAAAACATCAGAAACATTTTAATGATTCAAACTCGAGGAAATCTCAA
AAAAGCTCATTCTTGGGCATATTTTTGACCAAATTGAGGAAACctcaaaa
aacctcatttttggacatattttggcccaaattgacgcaaaaatttttct
tcttgaaagtcgggctccgtcacattcgaggctTTACCATTTTGATTCTT
TGTGCTAAATAtcggaaaaattgaatgagccacgaacgaacgaacgaacg
aacgaacgaacgaacgaacgaacggttaattcataggaccttcACCGGGG
TAGATCCAAAAAAGAAGATAGCATCTCGCATGGCGGCAAAAAGAGAATAT
AAGGATGAAAAAGAAGAGAAGAAGAGACTAGACGAAGGTTGGAATACTTT
GTTTATAATAAAATAGTTATTGCATAAAAAGCTCGTGCCGAGCTAAAGTT
CGAAAATCAACCTTCAGAGGCTGAATTCTTCCAATTTAATAGTTTTAGAG
TTGGATTCCATGTTGAAAGGTATGTGGTAATATCAAATAGATATCAATTC
AACCAATGGCCCAAGCAGTCAGTCAACTTGGAGATAGGATGGCTTGATCC
AAGTTTGCGCTTACTGCAGTATTATATAGGGGAAACTTTGCAGCATTATA
TAGGGGAAATTAAAAACCGTGTGATGTGTAGccaattcaaaataaaacat
aacacaTTTTTCTAACCGAAATCCCAAGTTGGTTGAAGTTTCTTTCAATG
GTAAAATTTATCACATTGGATTACGGGAAGTTTGTAGTTAAAAAGCCGAG
GAGTACCATTCCTTTGACACTTGGCTTGGCCATGAAATCCCAAGTTGGTT
AGAAGTCTCTTGCTATTAATATGGCAAATATGAATCAGACTAGACATAGA
AGAGGAAGGTCATCTCATTAGCTCAGTGTGGGAAAATCATATAGTGCGGA
CAATCGACAGAGCGGAAAACGAAAGTATAGAGAGCAATTATAATAAGAAA
ACTCTGATTTTTGCGATTCTTAGATGCTGATGAAAGGGTCCTCTCGATGG
TGTGGCAGACCACGTTAACTTCCAAAATgttaaattgacaaaaatactca
caaaatggtaaaaaataagAGAACTTTTAGAAcgtttttagacttaaaac
tcaaaaagttaagagcaagcttcaaaaattttggatgtcctTATAAACAG
ACGTGTATACACTAAAGGACCACTAAGAGAACTCCACGACAGATCATTAC
GTTCTTCGGACACCCATTTCGAAAATTCGGACAAAGAATCAAAGTGATTA
CACTAATTTGTCACCACAGAGTGAATCTTTCTCTGGTTTAGAATTCTAGT
CCATCCGGATTTGCTTTGTTTCCAAGAGAAGATGCCCTATTCACAAAACT
GGACAATAACAGTGACCAAGAAGCATATCATTTCAAAGCTCAGCATATAT
GTCGGAGTATGGTATCTTTCCAACACCAGTCTAAGACTGTCATTCTCTAT
TTGCCCAGCTCATAAGAAAATTCGTTAATGACCTTTATAACCATCATCTT
GGTCAACAAAAACTGGATCTTTGCATTCACAAGTAGGCTTTAAGAAAAAC
CCAGAGAAGGTCTCAACTCCACCATGACAAATAACAATACTGCATGTCGG
CACACAATTCAATCGAGACTCTCCTTAATCATGATGAAAGTATGGTGGGA
TTATTCGTGCCTTCAAAAAATCCACAATACATAAGTAAGAAAGTCAACAA
AATTAAAACTtaaatttcatgtcaaaagctttAACTATTCAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029210-exon-sc0000728-1491911889:91422..94265 | TCONS_00029210-exon-sc0000728-1491911889:91422..94265 | Clytia hemisphaerica | exon |
| TCONS_00029210-exon-sc0000728-1510915933:91422..94265 | TCONS_00029210-exon-sc0000728-1510915933:91422..94265 | Clytia hemisphaerica | exon |
| TCONS_00029210-exon-sc0000728-1575043694:91422..94265 | TCONS_00029210-exon-sc0000728-1575043694:91422..94265 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000728 | supercontig | sc0000728:91422..94265 . |
Blast
The following BLAST results are available for this feature:
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