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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029227 ID=TCONS_00029227|Name=TCONS_00029227|organism=Clytia hemisphaerica|type=transcript|length=500bp
ACCGACAAGCTTGAGATCAGAAGTCcgaaaatatttaaaagaaagCGATT
CAATTTCTCACCATGCTGAACTACTGTACCGCTCCTACAATCAAAAACCG
GATCGAATATTACGAAAACGAAAGAATTACGGCCTTTTGTTTACCGATAC
GTTCTAAATCTCATCAACCGAGGTCAGAGATACCGATGGGAAGCAGTTAG
CGTTGATTGGCAGCAACCAGACAACGAATCCTCTTGTCAAAGTTGCTGTT
TGGACAATGACTGTGTCAATGGGAGTTATGACGTTCCTGGTTTTAAACAC
CTCCAAATACTGGatgtaaattaaaattatcTTCGAAGAGAAGGGATTGT
GAATGGATTGCTGATTCCATGCAAAAATGCATTGCCACTTGCCTTTTCCT
TACTTAACTGGCCATTCAATCAAAATAACACCTTTTATTTTTCTCCGGTA
ATTTTGATGACGGAGGTACTGATTTAATGGACATTTTCATATTGCCTCAC Run BLAST on NCBI transcript from alignment at sc0000730:98864..100205+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029227 ID=TCONS_00029227|Name=TCONS_00029227|organism=Clytia hemisphaerica|type=transcript|length=1342bp|location=Sequence derived from alignment at sc0000730:98864..100205+ (Clytia hemisphaerica)
ACCGACAAGCTTGAGATCAGAAGTCcgaaaatatttaaaagaaaggtatc
aaatttgttttcatttgaacTTTTTTGAAACGCTCCatacaaattttcta
tttttagggAATGTTCATATGGAGGTGGGACGGCCCACTGACTCACTTAA
GTGGGAttgaattttcttaaatttatcagagtttttcgtcaaaacagTTG
CAATTGTAACTTCTTCAAGGTCGTTTTTCCATCTCAATGTCCGCTCATAT
GAGAAATTTCAATCCCACCTGAGAGAGATACCACTCAAATCAAGTAAGAT
CCCAGCTAGCCTTGTTCGCAAATGAACACGATTCGTTCAcgggaaaataa
aaacaagagtGAGATCTTTAACGGCTAGCCCACCTCCATATGAACAGCCC
CTTAAAGAGTAAGTTAATTGGCTTGCTTGTCCTATTCTTCATTCGTTTTA
TACTTGAAGATGGATGGGCGAACAAACTGTGAATTTTGTCCGACTGTTAT
GAGTTGTTTGGGTATTGGCTCATTAgctttttctattatttttttgtata
aaagatgaaaaatggcaGTGTCCAAATGTGACAGTCCCCGATTTtcctta
gaaattttttttttcttctgaaattccGGAAATATACCGTTTTTAGGGAC
TTTGCCGAAATTTTATTGTTagtttttctgatatttttttgcacaaagat
gtataTTAATATGTATAGTCTTCTTAGTTTACCTAGTTCCTTCTATAGTT
TAGTAGAAGGTTCTTTTTACATAACTATTGGGTGTTTCTTTTGTAAGAAG
CAAAGACGAGACCTTTTCAACAACTTTTCCTTAACCTTTATCACCGTGTA
CAATATACAATTTCTATGATTTCTAACTTCTTTGTAGCGATTCAATTTCT
CACCATGCTGAACTACTGTACCGCTCCTACAATCAAAAACCGGATCGAAT
ATTACGAAAACGAAAGAATTACGGCCTTTTGTTTACCGATACGTTCTAAA
TCTCATCAACCGAGGTCAGAGATACCGATGGGAAGCAGTTAGCGTTGATT
GGCAGCAACCAGACAACGAATCCTCTTGTCAAAGTTGCTGTTTGGACAAT
GACTGTGTCAATGGGAGTTATGACGTTCCTGGTTTTAAACACCTCCAAAT
ACTGGatgtaaattaaaattatcTTCGAAGAGAAGGGATTGTGAATGGAT
TGCTGATTCCATGCAAAAATGCATTGCCACTTGCCTTTTCCTTACTTAAC
TGGCCATTCAATCAAAATAACACCTTTTATTTTTCTCCGGTAATTTTGAT
GACGGAGGTACTGATTTAATGGACATTTTCATATTGCCTCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029227-exon-sc0000730-1491911889:98864..98908 | TCONS_00029227-exon-sc0000730-1491911889:98864..98908 | Clytia hemisphaerica | exon |
| TCONS_00029227-exon-sc0000730-1510915933:98864..98908 | TCONS_00029227-exon-sc0000730-1510915933:98864..98908 | Clytia hemisphaerica | exon |
| TCONS_00029227-exon-sc0000730-1575043694:98864..98908 | TCONS_00029227-exon-sc0000730-1575043694:98864..98908 | Clytia hemisphaerica | exon |
| TCONS_00029227-exon-sc0000730-1491911889:99751..100205 | TCONS_00029227-exon-sc0000730-1491911889:99751..100205 | Clytia hemisphaerica | exon |
| TCONS_00029227-exon-sc0000730-1510915933:99751..100205 | TCONS_00029227-exon-sc0000730-1510915933:99751..100205 | Clytia hemisphaerica | exon |
| TCONS_00029227-exon-sc0000730-1575043694:99751..100205 | TCONS_00029227-exon-sc0000730-1575043694:99751..100205 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000730 | supercontig | sc0000730:98864..100205 + |
Blast
The following BLAST results are available for this feature:
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