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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029230 ID=TCONS_00029230|Name=TCONS_00029230|organism=Clytia hemisphaerica|type=transcript|length=845bp
AAAGATGGATTTGAAGATTCTCATTTTGGCTTTTCTTGCAGTGGTAATCA
TAGaaaaatgcaacaGCTGCAAGATACCAGTTCTCAGCTCGGATCATAAA
GGAGGAAAGTCGGTTAttggaaaatatttcaatattgaACGAAAACGCAT
TAGAGGGCTGagatacaggggtgtaaagaGATTCGTAGCATACAACTTTC
GCTTAGGACTCATCGGTGAAGTAGTAGTTTGGGGCAATAAAAATGGTGGA
AGTAAGGGAGATGCTCATGGAAGGTTTTCGAACAGAGGCAATGTTACTGC
AAGACCAGGACAATGGCAGCCTATGGACTGTTCCATTTGCGCCAATCGTA
TGtcgatattttttcaaagttttgaccCTTATAGTATTctcttttcttag
aaaaattaagattaggtTCATTTCTCAGCCCCAGAAAATATAGCCTCACT
ATCAATTTGCCCTCAGGGGGTATTAATAAAGAATCGCTAAATTTGTTATC
GAATATGAATAAGATCAATGAAATTCatgaaatttcaaagaaaaatttcg
aTCCTGTTGCTTGCATAAAGGATATATATTTAAAGCCTAGTTGATACAAT
TCGTTTTTAGTACAGGCAAGGTACAGGCTATTTTATTTTCTACATCACCG
CGGTAATCAACTTTTTATGGTTGAGCTGAGCActctttcaaaataaagat
ataagTTTACAAAGATAACAACACTAGAAAATAGTTCCTGAATTCCAAAG
TCAATTAAAGGGTGGCAATATACAAATCATTTTTTAGAATACGTCTTTCT
CGAAGGGAAATCTGCTCAAACTAGGCTTTTACCTTTAAGTTGAGT Run BLAST on NCBI transcript from alignment at sc0000730:66077..67080- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029230 ID=TCONS_00029230|Name=TCONS_00029230|organism=Clytia hemisphaerica|type=transcript|length=1004bp|location=Sequence derived from alignment at sc0000730:66077..67080- (Clytia hemisphaerica)
AAAGATGGATTTGAAGATTCTCATTTTGGCTTTTCTTGCAGTGGTAATCA
TAGGTTTGTAATTTCTTTCGAGAAAGTTTTTTCATTAAAAACTTGGAGAA
AGTCAGAGTTTCTTGGCAAAACTTTTTGTCTCTGTCGATTTTAAATCATA
CGGTAAATAGAAATAAGTTTCTTCAGATGTTGAGAATGCTATCTTTTCTT
TTCCTTTTTTAGAAAAATGCAACAGCTGCAAGATACCAGTTCTCAGCTCG
GATCATAAAGGAGGAAAGTCGGTTATTGGAAAATATTTCAATATTGAACG
AAAACGCATTAGAGGGCTGAGATACAGGGGTGTAAAGAGATTCGTAGCAT
ACAACTTTCGCTTAGGACTCATCGGTGAAGTAGTAGTTTGGGGCAATAAA
AATGGTGGAAGTAAGGGAGATGCTCATGGAAGGTTTTCGAACAGAGGCAA
TGTTACTGCAAGACCAGGACAATGGCAGCCTATGGACTGTTCCATTTGCG
CCAATCGTATGTCGATATTTTTTCAAAGTTTTGACCCTTATAGTATTCTC
TTTTCTTAGAAAAATTAAGATTAGGTTCATTTCTCAGCCCCAGAAAATAT
AGCCTCACTATCAATTTGCCCTCAGGGGGTATTAATAAAGAATCGCTAAA
TTTGTTATCGAATATGAATAAGATCAATGAAATTCATGAAATTTCAAAGA
AAAATTTCGATCCTGTTGCTTGCATAAAGGATATATATTTAAAGCCTAGT
TGATACAATTCGTTTTTAGTACAGGCAAGGTACAGGCTATTTTATTTTCT
ACATCACCGCGGTAATCAACTTTTTATGGTTGAGCTGAGCACTCTTTCAA
AATAAAGATATAAGTTTACAAAGATAACAACACTAGAAAATAGTTCCTGA
ATTCCAAAGTCAATTAAAGGGTGGCAATATACAAATCATTTTTTAGAATA
CGTCTTTCTCGAAGGGAAATCTGCTCAAACTAGGCTTTTACCTTTAAGTT
GAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029230-exon-sc0000730-1575043694:67028..67080 | TCONS_00029230-exon-sc0000730-1575043694:67028..67080 | Clytia hemisphaerica | exon |
| TCONS_00029230-exon-sc0000730-1575043694:66077..66868 | TCONS_00029230-exon-sc0000730-1575043694:66077..66868 | Clytia hemisphaerica | exon |
| TCONS_00029230-exon-sc0000730-1510915933:67028..67080 | TCONS_00029230-exon-sc0000730-1510915933:67028..67080 | Clytia hemisphaerica | exon |
| TCONS_00029230-exon-sc0000730-1510915933:66077..66868 | TCONS_00029230-exon-sc0000730-1510915933:66077..66868 | Clytia hemisphaerica | exon |
| TCONS_00029230-exon-sc0000730-1491911889:67028..67080 | TCONS_00029230-exon-sc0000730-1491911889:67028..67080 | Clytia hemisphaerica | exon |
| TCONS_00029230-exon-sc0000730-1491911889:66077..66868 | TCONS_00029230-exon-sc0000730-1491911889:66077..66868 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000730 | supercontig | sc0000730:66077..67080 - |
Blast
The following BLAST results are available for this feature:
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