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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029249 ID=TCONS_00029249|Name=TCONS_00029249|organism=Clytia hemisphaerica|type=transcript|length=1568bp
agaatcttaACTTTTCCTCCTTATCAGTACACAATATCCAAACATTAAAC
ATGACTACTCTCTCTTGGAGACAATTGGATTATCTTTGTAACGCGAGAAA
CAAAAAAGTAGCAGTTCGAAGAAAGTTAAAGTCAATTCTTAAAGGGATTG
GTAACTCATTTTCAAAGGTGATATATTGATTTGTAATGGCTATGTAAGGC
TTAATTCCAATGATATTTTTAATATGGTATGCTCCGTGTTTACCTAACTT
ATTACTCCCATCGACCTGAGCTAAATCTGAATCGTTGTTGGCTGCCTCTA
ATTCCCCACTAGAGGTATTAAATATTGCTTTCTCTCCTCGTAGCTGTTTT
GCATTTTTCTGCCTTTTTCTAATAATATCATCTCTTCTTTCCTTTTCTTC
AACCTTGGTTAACCGATAAAAGCGTAAATTGATAAGTGATTTGGGAATTA
GGGGACGAAGTTAAATAAGTAAGTCTCTCATACCTGTTGTCCGTCGAAGT
TCAAACGAATTCATCAATAATCATTAAGTTCTAATGCCTCTTCTGACACC
CACAGGCTGGAAAATGCCTCTACCAATCAATCGACTGGTAAACATAATAC
GATCCGGTCCACTGACCGATCAATAATTTTTGTCAACTCATTAATATCTC
CTTCACTTGTTCTAACGTCACGTCCCAGTTCGTTTTGagcatgaaaaaga
agaaatagaagagACGCAATACTCTGACTCAAATGGGAAATTAACGATTG
TTTTGCAAGCATGTTCGCCTTAATGCCTTGTTCCCTCGTTAGGcttttga
aaatcttaacaTCATCCTAAAATCGACATGAAGCCAATGGACAAttgttt
atttattcatttttgaaactattcaaaatttataatgtacttgaataatt
GGAAAAGGAACCGATCTATTTAAAAATGTCTGACAAGAAACTATTAAACG
CCGTCTTTCCTCCGCTGACTTCAATAATCATGAATTCTAATGCTGCGCTG
TGCTCATCTGACACCAACGGGCTGGCAAATGCCTATACCGCTCAAGCGAT
TGGTACGAATAAATAAAATCCGGTCCACCGGCCGATCAACTTCGCTCTAA
CGCCcataaactaattttttttttttttttttttttttttttttttaNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNtttttttttttttttaaataattaattCTGGAAACC
TTGCGTAAATCCCATCCAGTTCATATACGCTTTCCTTTTTTAGAACAAAA
ATCATTCTAAATTCGATATAAGGCCAAAGAACAATTGTTTATCTATTCAT
TTTTGAAGCTATccttgttttcatttattttcaaaacacacTGCAAAATC
GACAAATGTCAAGTCTGTTAATTAATTCTCGAAAACCTGGCGTAAATAAC
TTATTGCAAAATCGAAATAATGTCTCCAAAATATAATTGATTCTCGAAAC
CTGGTGTAAATACCATCTGGTTCATCTACGCTATCCGCTTTATTCGCTCT
AACGCCCGTAAATTCATN Run BLAST on NCBI transcript from alignment at sc0000731:57170..58737 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029249 ID=TCONS_00029249|Name=TCONS_00029249|organism=Clytia hemisphaerica|type=transcript|length=1568bp|location=Sequence derived from alignment at sc0000731:57170..58737 (Clytia hemisphaerica)
NATGAATTTACGGGCGTTAGAGCGAATAAAGCGGATAGCGTAGATGAACC
AGATGGTATTTACACCAGGTTTCGAGAATCAATTATATTTTGGAGACATT
ATTTCGATTTTGCAATAAGTTATTTACGCCAGGTTTTCGAGAATTAATTA
ACAGACTTGACATTTGTCGATTTTGCAgtgtgttttgaaaataaatgaaa
acaaggATAGCTTCAAAAATGAATAGATAAACAATTGTTCTTTGGCCTTA
TATCGAATTTAGAATGATTTTTGTTCTAAAAAAGGAAAGCGTATATGAAC
TGGATGGGATTTACGCAAGGTTTCCAGaattaattatttaaaaaaaaaaa
aaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNtaaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaattagtttatgGGCGTTAGAGCGAAGTTGATCGGCCGGTGGACCGGA
TTTTATTTATTCGTACCAATCGCTTGAGCGGTATAGGCATTTGCCAGCCC
GTTGGTGTCAGATGAGCACAGCGCAGCATTAGAATTCATGATTATTGAAG
TCAGCGGAGGAAAGACGGCGTTTAATAGTTTCTTGTCAGACATTTTTAAA
TAGATCGGTTCCTTTTCCaattattcaagtacattataaattttgaatag
tttcaaaaatgaataaataaacaaTTGTCCATTGGCTTCATGTCGATTTT
AGGATGAtgttaagattttcaaaagCCTAACGAGGGAACAAGGCATTAAG
GCGAACATGCTTGCAAAACAATCGTTAATTTCCCATTTGAGTCAGAGTAT
TGCGTctcttctatttcttctttttcatgctCAAAACGAACTGGGACGTG
ACGTTAGAACAAGTGAAGGAGATATTAATGAGTTGACAAAAATTATTGAT
CGGTCAGTGGACCGGATCGTATTATGTTTACCAGTCGATTGATTGGTAGA
GGCATTTTCCAGCCTGTGGGTGTCAGAAGAGGCATTAGAACTTAATGATT
ATTGATGAATTCGTTTGAACTTCGACGGACAACAGGTATGAGAGACTTAC
TTATTTAACTTCGTCCCCTAATTCCCAAATCACTTATCAATTTACGCTTT
TATCGGTTAACCAAGGTTGAAGAAAAGGAAAGAAGAGATGATATTATTAG
AAAAAGGCAGAAAAATGCAAAACAGCTACGAGGAGAGAAAGCAATATTTA
ATACCTCTAGTGGGGAATTAGAGGCAGCCAACAACGATTCAGATTTAGCT
CAGGTCGATGGGAGTAATAAGTTAGGTAAACACGGAGCATACCATATTAA
AAATATCATTGGAATTAAGCCTTACATAGCCATTACAAATCAATATATCA
CCTTTGAAAATGAGTTACCAATCCCTTTAAGAATTGACTTTAACTTTCTT
CGAACTGCTACTTTTTTGTTTCTCGCGTTACAAAGATAATCCAATTGTCT
CCAAGAGAGAGTAGTCATGTTTAATGTTTGGATATTGTGTACTGATAAGG
AGGAAAAGTtaagattct
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029249-exon-sc0000731-1491911889:57170..58737 | TCONS_00029249-exon-sc0000731-1491911889:57170..58737 | Clytia hemisphaerica | exon |
| TCONS_00029249-exon-sc0000731-1510915933:57170..58737 | TCONS_00029249-exon-sc0000731-1510915933:57170..58737 | Clytia hemisphaerica | exon |
| TCONS_00029249-exon-sc0000731-1575043694:57170..58737 | TCONS_00029249-exon-sc0000731-1575043694:57170..58737 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000731 | supercontig | sc0000731:57170..58737 . |
Blast
The following BLAST results are available for this feature:
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