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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029279 ID=TCONS_00029279|Name=TCONS_00029279|organism=Clytia hemisphaerica|type=transcript|length=928bp
CGAACATcctcttaaaatattttctataattcgaatctctctgtaattcg
aacaaataagattccctgtttgagttcgaattagtgagagtcaactgtat
atgAAAACATTCGGTGACCAAactattaagaacaagttaagaacatttta
aggctttgtggacccgtccgaaggcttcaaaacttttagattttcttata
aaaaacgggTAAACTCTTGATCGGCTGCTGAAATGTTGCTGTTAAATTTA
GTGAATAATACCATTCCATTATTTCATAGGTATTTATTTCATTGATCGAG
ATAAGGATTTGGTTGGAAGTAATCTTCGtttcaaaagaacttttcataGA
TTTGAAAACGATCAACTTAAAGGCTTACCCCAAGATCCACCCTAGGTTTG
CTATGATTTCGCTGAGGAAGGTTTTATGTTTCTTGGTCGTTTCCCTACAA
AGGAAGGTTATATACTTGTCTTCCCAAATTGCCATATTCAAAAAATTGCT
AAGTTTGTTAATGAGTCAAAAACAAAAGCTGCTTCACGTCGTATCATTGT
TTCTTTGTTGTTAACCCTGAGAAGAAGATCATTTCAACAATGGAAGTATC
GCCACAGCAAGACACGATTGACCGTGAGACTGCGGAAGACTATCGTTTGC
AGCTTATGGCGGAACGTAAATTTGACAAGCAAAAATTGAATGTTCGCAGG
GTGCATCTTTGCGAACATTGATCTCGAGGTTTCATGCAATTTTAATTCAC
GTATTTCCTtttagcagattcatgtaaaaaagtcacgaaaaaactttgag
taaagctctgattggctgaatatTGCACACATTAgcacattttctttcaa
aatgtccaaagtatgaggtaatctttgcatgtctcagccaatcagagctt
tactcgacgttttttcgtgactttttta Run BLAST on NCBI transcript from alignment at sc0000735:11540..12467 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029279 ID=TCONS_00029279|Name=TCONS_00029279|organism=Clytia hemisphaerica|type=transcript|length=928bp|location=Sequence derived from alignment at sc0000735:11540..12467 (Clytia hemisphaerica)
taaaaaagtcacgaaaaaacgtcgagtaaagctctgattggctgagacat
gcaaagattacctcatactttggacattttgaaagaaaatgtgcTAATGT
GTGCAatattcagccaatcagagctttactcaaagttttttcgtgacttt
tttacatgaatctgctaaaAGGAAATACGTGAATTAAAATTGCATGAAAC
CTCGAGATCAATGTTCGCAAAGATGCACCCTGCGAACATTCAATTTTTGC
TTGTCAAATTTACGTTCCGCCATAAGCTGCAAACGATAGTCTTCCGCAGT
CTCACGGTCAATCGTGTCTTGCTGTGGCGATACTTCCATTGTTGAAATGA
TCTTCTTCTCAGGGTTAACAACAAAGAAACAATGATACGACGTGAAGCAG
CTTTTGTTTTTGACTCATTAACAAACTTAGCAATTTTTTGAATATGGCAA
TTTGGGAAGACAAGTATATAACCTTCCTTTGTAGGGAAACGACCAAGAAA
CATAAAACCTTCCTCAGCGAAATCATAGCAAACCTAGGGTGGATCTTGGG
GTAAGCCTTTAAGTTGATCGTTTTCAAATCtatgaaaagttcttttgaaa
CGAAGATTACTTCCAACCAAATCCTTATCTCGATCAATGAAATAAATACC
TATGAAATAATGGAATGGTATTATTCACTAAATTTAACAGCAACATTTCA
GCAGCCGATCAAGAGTTTAcccgttttttataagaaaatctaaaagtttt
gaagccttcggacgggtccacaaagccttaaaatgttcttaacttgttct
taatagtTTGGTCACCGAATGTTTTcatatacagttgactctcactaatt
cgaactcaaacagggaatcttatttgttcgaattacagagagattcgaat
tatagaaaatattttaagaggATGTTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029279-exon-sc0000735-1491911889:11540..12467 | TCONS_00029279-exon-sc0000735-1491911889:11540..12467 | Clytia hemisphaerica | exon |
| TCONS_00029279-exon-sc0000735-1510915933:11540..12467 | TCONS_00029279-exon-sc0000735-1510915933:11540..12467 | Clytia hemisphaerica | exon |
| TCONS_00029279-exon-sc0000735-1575043694:11540..12467 | TCONS_00029279-exon-sc0000735-1575043694:11540..12467 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000735 | supercontig | sc0000735:11540..12467 . |
Blast
The following BLAST results are available for this feature:
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