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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029285 ID=TCONS_00029285|Name=TCONS_00029285|organism=Clytia hemisphaerica|type=transcript|length=1151bp
atatttttgtggGTGAAAAGattgtatttaaaaaattaaattaaaattaa
atcatttaaaatttttgatccaGTCCTCTAATCTTTACCTTATATGGATT
AAGGATACCAGAAAGATTGAAATCAAACTAtgtaattatcattttgatat
GGCTTCCACAGAGTGCGGATGCCTTGAAGGGgtcattcaaaaagtatgta
cactcaaaagtaagcaaaatttgaccccctcccccttgtacacTTGCGTA
CGCTTTGACCTTTTAAGTATGCAGGCTTTTTTCGGTAACCCCCGCTCCCC
CTCtaggaagaaaatttgaaattataaaagaCATTGACTGATAGAAGTTT
GGTCTTGATTTGAATGATATGAATGATTTTTTCAAGATCAAAGTTAAAGA
AACTTAAGTTAAAGATTATAATAGGTTGATATATGGATAACATAAGTGAG
ATGGGTTAAAAGGTTTAtaatatttagatttttcaaattgaaagtaaaaa
aagcAACTGGAAAACTGGAGTCTATGTACTTATTGAATGGTCCCAAACCA
AGTCAAATTCTACATTGCATTAGGCCAAGGGGGTAAAATTGATCCTGTTA
AAATCCTGATAGAGAAAACAGTAAGAgctgaaactttttctggtgAGTCT
AGGCTACCTATGAATTTCTTCCATGGGTATGGTTTTTCGTAAAATAGCTG
CTAAGAAAACTTTTATTGCTTcgtgaaaaaatgcaattttagctatttta
ccccttaaaacctacaaaatggttttcttgaataactttttataaaatag
tccttttggtctcaaattttgaacagcgattcactgcaaagttactaatg
ctacaattagattattggtacctaaatattttcaaaattgtaccttaaaa
tcaaattacaccttaaaacctacactattacaAAAAGGTCCATAGGtagc
tggtcagggtacctttttcacctCTTATTTTTCCatgtaccagtggatac
cccttaaaacctacaacaagAAAAGGTACCCCCTATATCCTGATAGAGAT
AACAGTAAGGGCTGAAACCTTTTCTGGTGAGTCTAGGCTACCTATGAATT
TCTTCCATGGGTATGGTTTTTCGTAAAAGCTGCTAAGAAAACTTTTATTG
C Run BLAST on NCBI transcript from alignment at sc0000735:27341..28491 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029285 ID=TCONS_00029285|Name=TCONS_00029285|organism=Clytia hemisphaerica|type=transcript|length=1151bp|location=Sequence derived from alignment at sc0000735:27341..28491 (Clytia hemisphaerica)
GCAATAAAAGTTTTCTTAGCAGCTTTTACGAAAAACCATACCCATGGAAG
AAATTCATAGGTAGCCTAGACTCACCAGAAAAGGTTTCAGCCCTTACTGT
TATCTCTATCAGGATATAGGGGGTACCTTTTcttgttgtaggttttaagg
ggtatccactggtacatGGAAAAATAAGaggtgaaaaaggtaccctgacc
agctaCCTATGGACCTTTTtgtaatagtgtaggttttaaggtgtaatttg
attttaaggtacaattttgaaaatatttaggtaccaataatctaattgta
gcattagtaactttgcagtgaatcgctgttcaaaatttgagaccaaaagg
actattttataaaaagttattcaagaaaaccattttgtaggttttaaggg
gtaaaatagctaaaattgcattttttcacgAAGCAATAAAAGTTTTCTTA
GCAGCTATTTTACGAAAAACCATACCCATGGAAGAAATTCATAGGTAGCC
TAGACTcaccagaaaaagtttcagcTCTTACTGTTTTCTCTATCAGGATT
TTAACAGGATCAATTTTACCCCCTTGGCCTAATGCAATGTAGAATTTGAC
TTGGTTTGGGACCATTCAATAAGTACATAGACTCCAGTTTTCCAGTTgct
ttttttactttcaatttgaaaaatctaaatattaTAAACCTTTTAACCCA
TCTCACTTATGTTATCCATATATCAACCTATTATAATCTTTAACTTAAGT
TTCTTTAACTTTGATCTTGAAAAAATCATTCATATCATTCAAATCAAGAC
CAAACTTCTATCAGTCAATGtcttttataatttcaaattttcttcctaGA
GGGGGAGCGGGGGTTACCGAAAAAAGCCTGCATACTTAAAAGGTCAAAGC
GTACGCAAgtgtacaagggggagggggtcaaattttgcttacttttgagt
gtacatactttttgaatgacCCCTTCAAGGCATCCGCACTCTGTGGAAGC
CatatcaaaatgataattacaTAGTTTGATTTCAATCTTTCTGGTATCCT
TAATCCATATAAGGTAAAGATTAGAGGACtggatcaaaaattttaaatga
tttaattttaatttaattttttaaatacaatCTTTTCACccacaaaaata
t
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029285-exon-sc0000735-1491911889:27341..28491 | TCONS_00029285-exon-sc0000735-1491911889:27341..28491 | Clytia hemisphaerica | exon |
| TCONS_00029285-exon-sc0000735-1510915933:27341..28491 | TCONS_00029285-exon-sc0000735-1510915933:27341..28491 | Clytia hemisphaerica | exon |
| TCONS_00029285-exon-sc0000735-1575043694:27341..28491 | TCONS_00029285-exon-sc0000735-1575043694:27341..28491 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000735 | supercontig | sc0000735:27341..28491 . |
Blast
The following BLAST results are available for this feature:
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