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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029302 ID=TCONS_00029302|Name=TCONS_00029302|organism=Clytia hemisphaerica|type=transcript|length=1795bp
ccccccccccccgtttattaatttttaagaatattttcagttggtaaAAA
ATAGTCCTCTTATTTTgttccaaaaagcctgattttagccaatatttacc
ttatttttgggttttcagaagtacaatttccaaccccctccgGCAATTAA
GCcccctccccccgtttatttggcacctaagagtatctCCTGCTGCCTTT
CTCCTGTTCCTCAGTGAACCAGATCAAGTACTGGCACTAGTGTAAATGAC
ATTTCCACtaattgtttttaagtttcTGTAATAAATAATATAAGGATATA
AGAAAAACgaaataatataaatatatgTTTGCTATTTTATAATAATATCA
TTACaattatttttgtcattttatctcAACTACTAGCCCATTGATTTAGC
GGCAGCTAACCACTAGCTCTAATTTGAAATCAGTCACTTTTCGTTTGATT
ATTAAAAGGTATTATATTAAGCTTTATGAATCaaataaaataacttttaa
gattttcttctctttttgcTTAAGTTTGACCTATATTAACGCAAGAAGTC
GATCCGTGGAAGTTCTCTTAGATTTTGCTATATTGACTTTTACCTTTCGT
TTGTTTCAGTGTAACaaataaataatgaaataatttgtTCGAGATGAGAT
CAGGAAAATACAAGCTAGGCGGTCCAATTGTAAAAAGAGGTTTGATTTCT
GGCAAATGCCGTGTATTGTCATGCAGATTCTACCATAAACATATAAAGGA
TTTAAAGGGACACCTTGAGCGAGCTCATAATATGACGTTGGTATCTCATG
CAAAATTACCTCCGTCACAGCTCAGTAGTGTCATACAGAAAAATAAGGGT
AAATCGTATATGAAAGGTAGGAAAATTGAACTATGTAGCCTAAGGGGTTG
CATACACTATATGCAACCTCAAACGGATCTTACCCGACATTTAAAAATCT
ACCACGCCGGTATGACGAAGAAGGAATATTATGCTAAAAGGTACTGTCAA
TTTTCAATTCAGTCCATGAACTGCTGCGTTGATTCAGTGTTGATTGGTAT
TTGATCTTTTCACCTTTTTGGAGGTCTAATaagttttgtcttttttttac
gCAACGTTTATTGGAATGACAGGATCTCAATGATTATAATCTAATGACAA
AACTTCAAGAGGAGCTTTTTTTAACGTTGTCTATGATTGTTGATTTCACT
CCAAACTAACAAACACGCCTATTTATAGAAATGTTCCCTCTGTTTCCTTT
CAAAGTTAAACTATGTTAATGTGGTATTAGAATTTCTTCATGGGAGTTAG
TCTAATTTATTGcagtaaaatttattttacacTATCCTTTATACTACCCC
ATAGCATAGGGCTAACACTAATAAGTTTTCCTTTTCACAAGAATATATGC
GTAACTCCTAAATCTATTAATTGAGGTTCAGCATTTTAAACCACTTCTCT
TGTTTAGGAAACCAAATGAACCGTcttcaagctcggctataaggAATTTC
CAATCGTTGGGTCCAGCCGTAACTGAGGATGAGATCTTTGGAACAGATAC
CAACAATAGCGAGGAAAAAGATCAAAATGTAAATAACAAAAGTAACGAAA
TTAGCGATGACGAAAGAAGTGTCCTCGACTCGGATGTAACGCTTTCTTCT
CCATTTTGTCCTGAAATCACAAGTCCTAGAAAAGaTCTGAACATCAAAAC
CCGTGCTCGAAGAGTCTTACTACCGGAATTGTAATAGTGGAGGATTTTAT
ACATTACTTactgaataaaagaaaaattatttctgaaaGAACATA Run BLAST on NCBI transcript from alignment at sc0000736:30789..33456- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029302 ID=TCONS_00029302|Name=TCONS_00029302|organism=Clytia hemisphaerica|type=transcript|length=2668bp|location=Sequence derived from alignment at sc0000736:30789..33456- (Clytia hemisphaerica)
CCCCCCCCCCCCGTTTATTAATTTTTAAGAATATTTTCAGTTGGTAAAAA
ATAGTCCTCTTATTTTGTTCCAAAAAGCCTGATTTTAGCCAATATTTACC
TTATTTTTGGGTTTTCAGAAGTACAATTTCCAACCCCCTCCGGCAATTAA
GCCCCCTCCCCCCGTTTATTTGGCACCTAAGAGTATCTCCTGCTGCCTTT
CTCCTGTTCCTCAGTGAACCAGATCAAGTACTGGCACTAGTGTAAATGAC
ATTTCCACTAATTGTTTTTAAGTTTCTGTAATAAATAATATAAGGATATA
AGAAAAACGAAATAATATAAATATATGTTTGCTATTTTATAATAATATCA
TTACAATTATTTTTGTCATTTTATCTCAACTACTAGCCCATTGATTTAGC
GGCAGCTAACCACTAGCTCTAATTTGAAATCAGTCACTTTTCGTTTGATT
ATTAAAAGGTATTATATTAAGCTTTATGAATCAAATAAAATAACTTTTAA
GATTTTCTTCTCTTTTTGCTTAAGTTTGACCTATATTAACGCAAGAAGTC
GATCCGTGGAAGTTCTCTTAGATTTTGCTATATTGACTTTTACCTTTCGT
TTGTTTCAGTGTAACAAATAAATAATGAAATAATTTGTTCGAGATGAGAT
CAGGAAAATACAAGCTAGGCGGTCCAATTGTAAGTAACTTGTTTTATTTT
TGGATTCTAATGAAGAATAGGCTAAACAGAGAAGAAGTCAATATCTTTAT
AGTACATGGTCTGCACTTTGCTTTGTCAGAGATACTAGGAAATGTCAGGA
ATTCGGAAAAAGAGGCAAAATATCAGGAAAAGATTTTCCTGAAATGGTGG
TGCAAAGCAGATATTTTCTTCCAGCACAAGATATTTTGTTATACTTTTTA
GGTAAAAAGAGGTTTGATTTCTGGCAAATGCCGTGTATTGTCATGCAGAT
TCTACCATAAACATATAAAGGATTTAAAGGGACACCTTGAGCGAGCTCAT
AATATGACGTTGGTATCTCATGCAAAATTACCTCCGTCACAGCTCAGTAG
TGTCATACAGAAAAATAAGGGTAAATCGTATATGAAAGGTAGGAAAATTG
AACTATGTAGCCTAAGGGGTTGCATACACTATATGCAACCTCAAACGGAT
CTTACCCGACATTTAAAAATCTACCACGCCGGTATGACGAAGAAGGAATA
TTATGCTAAAAGGTACTGTCAATTTTCAATTCAGTCCATGAACTGCTGCG
TTGATTCAGTGTTGATTGGTATTTGATCTTTTCACCTTTTTGGAGGTCTA
ATAAGTTTTGTCTTTTTTTTACGCAACGTTTATTGGAATGACAGGATCTC
AATGATTATAATCTAATGACAAAACTTCAAGAGGAGCTTTTTTTAACGTT
GTCTATGATTGTTGATTTCACTCCAAACTAACAAACACGCCTATTTATAG
AAATGTTCCCTCTGTTTCCTTTCAAAGTTAAACTATGTTAATGTGGTATT
AGAATTTCTTCATGGGAGTTAGTCTAATTTATTGCAGTAAAATTTATTTT
ACACTATCCTTTATACTACCCCATAGCATAGGGCTAACACTAATAAGTTT
TCCTTTTCACAAGAATATATGCGTAACTCCTAAATCTATTAATTGAGGTT
CAGCATTTTAAACCACTTCTCTTGTTTAGGAAACCAAATGAACCGTCTTC
AAGCTCGGCTATAAGGAATTTCCAATCGTTGGGTCCAGCCGTAACTGAGG
ATGAGATCTTTGGAACAGGTATGACAATTGTTTTGTTAAAAAGGGTTGAA
AATTCCATGTATTATATACATATCCGGTGCAAAACTTATATATTGACAAA
GCAGAAATAACAGAATAATTTGTATATTTTGGGTTGGGGAGGCAACGGCA
ATCAAAAACTCAAACCCAAAAGAAAAGTAATCGACCTCTCTGGACTCCGC
TTGTTCTTATTTCGGCAGAACTTCATATGCTTCCTACTCTCACATAAAAT
CACATTCTAGTCAAAAACGTTATATTGAAAATCTTATGTCAGTTTTTTTT
TGTTTACGTTTATTTGTATTTTTGAAAGGGCAGCTTAGAATGTATATCAC
TCCAGGAATCTGTTTAAAGCCTTCGTACCTTTCTTTTTCCTGAAGAAATA
TCTCTTCTTTGATTATAGATACCAACAATAGCGAGGAAAAAGATCAAAAT
GTAAATAACAAAAGTAACGAAATTAGCGATGACGAAAGAAGTGTCCTCGA
CTCGGATGTAACGCTTTCTTCTCCATTTTGTCCTGAAATCACAAGTCCTA
GAAAAGGTTTGTTATACAATCTTAAAATAAAATCTTTCGTTGCTTTTTTT
CGAAGCATAAAGTTGATAAATAGGTCATAATAGGTCAATCCTCACTCAAT
ATTTTTCTCTACCAGAAAGCATTACCTTATTTCCTCCTGCCAAAGTTGAA
ATCCAATGTACAATTTTTTTTTAAAGGAACTGAGCGTCATCAAGTATTTT
AAAGAAGCTCTAGTTAAGGGCTTACTGACTTATCTAGTATTATTTTTTTA
TTTACAGATCTGAACATCAAAACCCGTGCTCGAAGAGTCTTACTACCGGA
ATTGTAATAGTGGAGGATTTTATACATTACTTACTGAATAAAAGAAAAAT
TATTTCTGAAAGAACATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029302-exon-sc0000736-1575043694:32778..33456 | TCONS_00029302-exon-sc0000736-1575043694:32778..33456 | Clytia hemisphaerica | exon |
| TCONS_00029302-exon-sc0000736-1575043694:31689..32555 | TCONS_00029302-exon-sc0000736-1575043694:31689..32555 | Clytia hemisphaerica | exon |
| TCONS_00029302-exon-sc0000736-1575043694:31151..31288 | TCONS_00029302-exon-sc0000736-1575043694:31151..31288 | Clytia hemisphaerica | exon |
| TCONS_00029302-exon-sc0000736-1575043694:30789..30899 | TCONS_00029302-exon-sc0000736-1575043694:30789..30899 | Clytia hemisphaerica | exon |
| TCONS_00029302-exon-sc0000736-1510915933:32778..33456 | TCONS_00029302-exon-sc0000736-1510915933:32778..33456 | Clytia hemisphaerica | exon |
| TCONS_00029302-exon-sc0000736-1510915933:31689..32555 | TCONS_00029302-exon-sc0000736-1510915933:31689..32555 | Clytia hemisphaerica | exon |
| TCONS_00029302-exon-sc0000736-1510915933:31151..31288 | TCONS_00029302-exon-sc0000736-1510915933:31151..31288 | Clytia hemisphaerica | exon |
| TCONS_00029302-exon-sc0000736-1510915933:30789..30899 | TCONS_00029302-exon-sc0000736-1510915933:30789..30899 | Clytia hemisphaerica | exon |
| TCONS_00029302-exon-sc0000736-1491911889:32778..33456 | TCONS_00029302-exon-sc0000736-1491911889:32778..33456 | Clytia hemisphaerica | exon |
| TCONS_00029302-exon-sc0000736-1491911889:31689..32555 | TCONS_00029302-exon-sc0000736-1491911889:31689..32555 | Clytia hemisphaerica | exon |
| TCONS_00029302-exon-sc0000736-1491911889:31151..31288 | TCONS_00029302-exon-sc0000736-1491911889:31151..31288 | Clytia hemisphaerica | exon |
| TCONS_00029302-exon-sc0000736-1491911889:30789..30899 | TCONS_00029302-exon-sc0000736-1491911889:30789..30899 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000736 | supercontig | sc0000736:30789..33456 - |
Blast
The following BLAST results are available for this feature:
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