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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029320 ID=TCONS_00029320|Name=TCONS_00029320|organism=Clytia hemisphaerica|type=transcript|length=912bp
GAAAAATTTGCAAAGCGTAAGAAGTCAGAAAAAGATCAAACATGGATACA
ATGCGATGTTTCAACGTGTAATCTTTGGTATCACCTTGAGTGTGTCAATA
TCAAGTTTTCTTccgaaaaagaaaagcaaaattttattttcaactgtcCT
GCACATTCATCCTTtgcgtacagagcaaagtataCCATAGATGAAAGTGT
CTTGGTCAAAGAAATCCAATCTGTTCAAGAATTGACGTCTCGGCTGGCAC
ACAACAGAAAGACTTTACCAGTTAACTTGAATCCGCAAAATTACGTCGAG
TACGAGGGTAACATATACCATATATCTCGTTTCCTATCTCTGGCCTGCAT
GAAGACTTATACACCGATGACGTCAAGGAAAGAACGTTGGAAGGCCGCAA
ACATGGACAACTATTTTGACAAGCTGCGCAAAACAATAGGAGATGTTGAA
TCTGGCAATCTGATTTTCTTTACAGCCAAGTCTACGAATCCAGATCAAAC
AAGAAAAGAATTGACTTTAGGTACCATTGTACGAATTGTGAAAAGATTTT
CTACAAAGACAGCAGCAATTTTAATGCAAGGGCAGGGGAAGGAGATCAAG
TCCCTCGAATTCTTTGTTCTTCTTTCCAAAAGTTCAGATACTTTGGAGCT
GACAGGTAAATTTGCAACCGTCAAAGGAAAAGATGTCGTGCATATCTGTT
CTGAACTTAACGAAGAAGCTAAAAACAAAGCCTTAGTCACATTCAGTAAA
CTACCTGCTGAACTGATAGATGATGAAGATACAGATCCAGACTCAATGAC
TGTCAAGatcatgaaaaatgttttgcGTAAGGCAAATATCGAATGCAAAA
GCATCGAGCAAAGGCCTGCTCTTTTAGctaaagtcaaatttttgatggAA
AGCAAAAACACG Run BLAST on NCBI protein sequence of TCONS_00029320-protein >TCONS_00029320-protein ID=TCONS_00029320-protein|Name=TCONS_00029320-protein|organism=Clytia hemisphaerica|type=polypeptide|length=304bp
EKFAKRKKSEKDQTWIQCDVSTCNLWYHLECVNIKFSSEKEKQNFIFNCP
AHSSFAYRAKYTIDESVLVKEIQSVQELTSRLAHNRKTLPVNLNPQNYVE
YEGNIYHISRFLSLACMKTYTPMTSRKERWKAANMDNYFDKLRKTIGDVE
SGNLIFFTAKSTNPDQTRKELTLGTIVRIVKRFSTKTAAILMQGQGKEIK
SLEFFVLLSKSSDTLELTGKFATVKGKDVVHICSELNEEAKNKALVTFSK
LPAELIDDEDTDPDSMTVKIMKNVLRKANIECKSIEQRPALLAKVKFLME
SKNT Run BLAST on NCBI transcript from alignment at sc0000737:15425..16336 Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029320 ID=TCONS_00029320|Name=TCONS_00029320|organism=Clytia hemisphaerica|type=transcript|length=912bp|location=Sequence derived from alignment at sc0000737:15425..16336 (Clytia hemisphaerica)
CGTGTTTTTGCTTTccatcaaaaatttgactttagCTAAAAGAGCAGGCC
TTTGCTCGATGCTTTTGCATTCGATATTTGCCTTACgcaaaacatttttc
atgatCTTGACAGTCATTGAGTCTGGATCTGTATCTTCATCATCTATCAG
TTCAGCAGGTAGTTTACTGAATGTGACTAAGGCTTTGTTTTTAGCTTCTT
CGTTAAGTTCAGAACAGATATGCACGACATCTTTTCCTTTGACGGTTGCA
AATTTACCTGTCAGCTCCAAAGTATCTGAACTTTTGGAAAGAAGAACAAA
GAATTCGAGGGACTTGATCTCCTTCCCCTGCCCTTGCATTAAAATTGCTG
CTGTCTTTGTAGAAAATCTTTTCACAATTCGTACAATGGTACCTAAAGTC
AATTCTTTTCTTGTTTGATCTGGATTCGTAGACTTGGCTGTAAAGAAAAT
CAGATTGCCAGATTCAACATCTCCTATTGTTTTGCGCAGCTTGTCAAAAT
AGTTGTCCATGTTTGCGGCCTTCCAACGTTCTTTCCTTGACGTCATCGGT
GTATAAGTCTTCATGCAGGCCAGAGATAGGAAACGAGATATATGGTATAT
GTTACCCTCGTACTCGACGTAATTTTGCGGATTCAAGTTAACTGGTAAAG
TCTTTCTGTTGTGTGCCAGCCGAGACGTCAATTCTTGAACAGATTGGATT
TCTTTGACCAAGACACTTTCATCTATGGtatactttgctctgtacgcaAA
GGATGAATGTGCAGgacagttgaaaataaaattttgcttttctttttcgg
AAGAAAACTTGATATTGACACACTCAAGGTGATACCAAAGATTACACGTT
GAAACATCGCATTGTATCCATGTTTGATCTTTTTCTGACTTCTTACGCTT
TGCAAATTTTTC Coding sequence (CDS) from alignment at sc0000737:15425..16336 >TCONS_00029320 ID=TCONS_00029320|Name=TCONS_00029320|organism=Clytia hemisphaerica|type=CDS|length=912bp|location=Sequence derived from alignment at sc0000737:15425..16336 (Clytia hemisphaerica)
CGTGTTTTTGCTTTccatcaaaaatttgactttagCTAAAAGAGCAGGCC
TTTGCTCGATGCTTTTGCATTCGATATTTGCCTTACgcaaaacatttttc
atgatCTTGACAGTCATTGAGTCTGGATCTGTATCTTCATCATCTATCAG
TTCAGCAGGTAGTTTACTGAATGTGACTAAGGCTTTGTTTTTAGCTTCTT
CGTTAAGTTCAGAACAGATATGCACGACATCTTTTCCTTTGACGGTTGCA
AATTTACCTGTCAGCTCCAAAGTATCTGAACTTTTGGAAAGAAGAACAAA
GAATTCGAGGGACTTGATCTCCTTCCCCTGCCCTTGCATTAAAATTGCTG
CTGTCTTTGTAGAAAATCTTTTCACAATTCGTACAATGGTACCTAAAGTC
AATTCTTTTCTTGTTTGATCTGGATTCGTAGACTTGGCTGTAAAGAAAAT
CAGATTGCCAGATTCAACATCTCCTATTGTTTTGCGCAGCTTGTCAAAAT
AGTTGTCCATGTTTGCGGCCTTCCAACGTTCTTTCCTTGACGTCATCGGT
GTATAAGTCTTCATGCAGGCCAGAGATAGGAAACGAGATATATGGTATAT
GTTACCCTCGTACTCGACGTAATTTTGCGGATTCAAGTTAACTGGTAAAG
TCTTTCTGTTGTGTGCCAGCCGAGACGTCAATTCTTGAACAGATTGGATT
TCTTTGACCAAGACACTTTCATCTATGGtatactttgctctgtacgcaAA
GGATGAATGTGCAGgacagttgaaaataaaattttgcttttctttttcgg
AAGAAAACTTGATATTGACACACTCAAGGTGATACCAAAGATTACACGTT
GAAACATCGCATTGTATCCATGTTTGATCTTTTTCTGACTTCTTACGCTT
TGCAAATTTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029320-exon-sc0000737-1491911889:15425..16336 | TCONS_00029320-exon-sc0000737-1491911889:15425..16336 | Clytia hemisphaerica | exon |
| TCONS_00029320-exon-sc0000737-1510915933:15425..16336 | TCONS_00029320-exon-sc0000737-1510915933:15425..16336 | Clytia hemisphaerica | exon |
| TCONS_00029320-exon-sc0000737-1575043694:15425..16336 | TCONS_00029320-exon-sc0000737-1575043694:15425..16336 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000737 | supercontig | sc0000737:15425..16336 . |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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